RNA–Protein interactions for RNA: ENST00000466396.5

CLTA-206, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-206ENST00000466396 C9orf131Q5VYM1 1079 aa29.1■■■□□ 2.25
CLTA-206ENST00000466396 SRCIN1Q9C0H9 1055 aa29.1■■■□□ 2.25
CLTA-206ENST00000466396 BCAR3O75815 825 aa29.09■■■□□ 2.25
CLTA-206ENST00000466396 HSP90B1P14625 803 aaKnown RBP29.09■■■□□ 2.25
CLTA-206ENST00000466396 GRAPQ13588 217 aa29.09■■■□□ 2.25
CLTA-206ENST00000466396 GRAPLQ8TC17 118 aaPredicted RBP29.09■■■□□ 2.25
CLTA-206ENST00000466396 MYH3P11055 1940 aa29.09■■■□□ 2.25
CLTA-206ENST00000466396 CELF1Q92879 486 aaKnown RBP29.08■■■□□ 2.25
CLTA-206ENST00000466396 PLA2G12BQ9BX93 195 aa29.08■■■□□ 2.25
CLTA-206ENST00000466396 SEC31BQ9NQW1 1179 aa29.08■■■□□ 2.25
CLTA-206ENST00000466396 LTBP3Q9NS15 1303 aa29.08■■■□□ 2.25
CLTA-206ENST00000466396 BBOX1O75936 387 aa29.07■■■□□ 2.24
CLTA-206ENST00000466396 CTSWP56202 376 aa29.07■■■□□ 2.24
CLTA-206ENST00000466396 TTLL11Q8NHH1 800 aa29.07■■■□□ 2.24
CLTA-206ENST00000466396 CCDC85AQ96PX6 553 aaPredicted RBP29.07■■■□□ 2.24
CLTA-206ENST00000466396 RNF181Q9P0P0 153 aa29.06■■■□□ 2.24
CLTA-206ENST00000466396 ATP6V0A2Q9Y487 856 aa29.06■■■□□ 2.24
CLTA-206ENST00000466396 GRM8O00222 908 aa29.05■■■□□ 2.24
CLTA-206ENST00000466396 LMNB1P20700 586 aa29.05■■■□□ 2.24
CLTA-206ENST00000466396 TAOK3Q9H2K8 898 aa29.05■■■□□ 2.24
CLTA-206ENST00000466396 CCDC152Q4G0S7 254 aa29.04■■■□□ 2.24
CLTA-206ENST00000466396 CC2D2BQ6DHV5 1058 aa29.04■■■□□ 2.24
CLTA-206ENST00000466396 RTKN2Q8IZC4 609 aa29.04■■■□□ 2.24
CLTA-206ENST00000466396 ZNF784Q8NCA9 323 aaPredicted RBP29.04■■■□□ 2.24
CLTA-206ENST00000466396 FKBP4Q02790 459 aaKnown RBP eCLIP29.03■■■□□ 2.24
CLTA-206ENST00000466396 SP8Q8IXZ3 490 aa29.03■■■□□ 2.24
CLTA-206ENST00000466396 UTYO14607 1347 aa29.02■■■□□ 2.24
CLTA-206ENST00000466396 KIF16BQ96L93 1317 aa29.02■■■□□ 2.24
CLTA-206ENST00000466396 CSF1RP07333 972 aa29.02■■■□□ 2.24
CLTA-206ENST00000466396 FOXO4P98177 505 aa29.02■■■□□ 2.24
CLTA-206ENST00000466396 ARHGAP45Q92619 1136 aa29.02■■■□□ 2.24
CLTA-206ENST00000466396 GREM2Q9H772 168 aa29.02■■■□□ 2.24
CLTA-206ENST00000466396 LRRC37AA6NMS7 1700 aa29.02■■■□□ 2.24
CLTA-206ENST00000466396 DICER1Q9UPY3 1922 aaKnown RBP29.02■■■□□ 2.24
CLTA-206ENST00000466396 NBPF7P0C2Y1 421 aaPredicted RBP29.01■■■□□ 2.23
CLTA-206ENST00000466396 RPS8P62241 208 aaKnown RBP29.01■■■□□ 2.23
CLTA-206ENST00000466396 EPHA10Q5JZY3 1008 aa29.01■■■□□ 2.23
CLTA-206ENST00000466396 API5Q9BZZ5 524 aaKnown RBP29.01■■■□□ 2.23
CLTA-206ENST00000466396 C9orf78Q9NZ63 289 aaPredicted RBP29.01■■■□□ 2.23
CLTA-206ENST00000466396 TNNQ9UQP3 1299 aa29.01■■■□□ 2.23
CLTA-206ENST00000466396 PSMD1Q99460 953 aa29■■■□□ 2.23
CLTA-206ENST00000466396 RTL9Q8NET4 1388 aa29■■■□□ 2.23
CLTA-206ENST00000466396 KAZALD1Q96I82 304 aa28.99■■■□□ 2.23
CLTA-206ENST00000466396 USP44Q9H0E7 712 aa28.99■■■□□ 2.23
CLTA-206ENST00000466396 ZNF277Q9NRM2 450 aaPredicted RBP28.99■■■□□ 2.23
CLTA-206ENST00000466396 TIAM2Q8IVF5 1701 aa28.98■■■□□ 2.23
CLTA-206ENST00000466396 TMC4Q7Z404 712 aa28.98■■■□□ 2.23
CLTA-206ENST00000466396 TRIM27P14373 513 aa28.97■■■□□ 2.23
CLTA-206ENST00000466396 GRIPAP1Q4V328 841 aa28.97■■■□□ 2.23
CLTA-206ENST00000466396 FRAT1Q92837 279 aaPredicted RBP28.97■■■□□ 2.23
CLTA-206ENST00000466396 SUCLG2Q96I99 432 aa28.97■■■□□ 2.23
CLTA-206ENST00000466396 FAM161AQ3B820 660 aa28.96■■■□□ 2.23
CLTA-206ENST00000466396 CCT4P50991 539 aaKnown RBP28.95■■■□□ 2.22
CLTA-206ENST00000466396 ATF7IPQ6VMQ6 1270 aa28.95■■■□□ 2.22
CLTA-206ENST00000466396 DUOX1Q9NRD9 1551 aa28.95■■■□□ 2.22
CLTA-206ENST00000466396 COL4A5P29400 1685 aa28.95■■■□□ 2.22
CLTA-206ENST00000466396 SPEF2Q9C093 1822 aa28.94■■■□□ 2.22
CLTA-206ENST00000466396 IPO8O15397 1037 aaKnown RBP28.94■■■□□ 2.22
CLTA-206ENST00000466396 MPNDQ8N594 471 aa28.94■■■□□ 2.22
CLTA-206ENST00000466396 RTFDC1Q9BY42 306 aaPredicted RBP28.94■■■□□ 2.22
CLTA-206ENST00000466396 LTBP1Q14766 1721 aa28.94■■■□□ 2.22
CLTA-206ENST00000466396 ITGA6P23229 1130 aa28.93■■■□□ 2.22
CLTA-206ENST00000466396 IARSP41252 1262 aaKnown RBP28.93■■■□□ 2.22
CLTA-206ENST00000466396 LMBR1LQ6UX01 489 aa28.93■■■□□ 2.22
CLTA-206ENST00000466396 ANKRD18AQ8IVF6 992 aa28.93■■■□□ 2.22
CLTA-206ENST00000466396 TMX4Q9H1E5 349 aaPredicted RBP28.93■■■□□ 2.22
CLTA-206ENST00000466396 GPSM2P81274 684 aa28.92■■■□□ 2.22
CLTA-206ENST00000466396 INTS3Q68E01 1043 aaKnown RBP28.92■■■□□ 2.22
CLTA-206ENST00000466396 ZNF526Q8TF50 670 aaPredicted RBP28.92■■■□□ 2.22
CLTA-206ENST00000466396 CDC5LQ99459 802 aaKnown RBP28.92■■■□□ 2.22
CLTA-206ENST00000466396 ZC3H4Q9UPT8 1303 aaKnown RBP28.92■■■□□ 2.22
CLTA-206ENST00000466396 DPP8Q6V1X1 898 aaPredicted RBP28.91■■■□□ 2.22
CLTA-206ENST00000466396 YTHDC1Q96MU7 727 aaKnown RBP28.91■■■□□ 2.22
CLTA-206ENST00000466396 ZKSCAN2Q63HK3 967 aa28.9■■■□□ 2.22
CLTA-206ENST00000466396 CLUAP1Q96AJ1 413 aa28.9■■■□□ 2.22
CLTA-206ENST00000466396 ANKRD44Q8N8A2 993 aa28.89■■■□□ 2.22
CLTA-206ENST00000466396 BICC1Q9H694 974 aaKnown RBP28.89■■■□□ 2.22
CLTA-206ENST00000466396 BSDC1Q9NW68 430 aaPredicted RBP28.89■■■□□ 2.22
CLTA-206ENST00000466396 NSFL1CQ9UNZ2 370 aaKnown RBP28.89■■■□□ 2.22
CLTA-206ENST00000466396 RABL6Q3YEC7 729 aaPredicted RBP28.88■■■□□ 2.21
CLTA-206ENST00000466396 POLLQ9UGP5 575 aa28.88■■■□□ 2.21
CLTA-206ENST00000466396 ANKRD18BA2A2Z9 1011 aa28.86■■■□□ 2.21
CLTA-206ENST00000466396 IFIT5Q13325 482 aaKnown RBP28.86■■■□□ 2.21
CLTA-206ENST00000466396 AOC3Q16853 763 aa28.86■■■□□ 2.21
CLTA-206ENST00000466396 PODXL2Q9NZ53 605 aa28.86■■■□□ 2.21
CLTA-206ENST00000466396 MINPP1Q9UNW1 487 aa28.86■■■□□ 2.21
CLTA-206ENST00000466396 CHMP3Q9Y3E7 222 aa28.86■■■□□ 2.21
CLTA-206ENST00000466396 SUPT20HQ8NEM7 779 aa28.85■■■□□ 2.21
CLTA-206ENST00000466396 MEIS3Q99687 375 aa28.85■■■□□ 2.21
CLTA-206ENST00000466396 GLTPD2A6NH11 291 aa28.84■■■□□ 2.21
CLTA-206ENST00000466396 PPIP5K2O43314 1243 aa28.84■■■□□ 2.21
CLTA-206ENST00000466396 IGHMBP2P38935 993 aaKnown RBP28.84■■■□□ 2.21
CLTA-206ENST00000466396 LARGE2Q8N3Y3 721 aa28.84■■■□□ 2.21
CLTA-206ENST00000466396 TMEM57Q8N5G2 664 aa28.84■■■□□ 2.21
CLTA-206ENST00000466396 TBC1D16Q8TBP0 767 aa28.84■■■□□ 2.21
CLTA-206ENST00000466396 ZNF594Q96JF6 807 aaPredicted RBP28.84■■■□□ 2.21
CLTA-206ENST00000466396 VPS33BQ9H267 617 aa28.84■■■□□ 2.21
CLTA-206ENST00000466396 GPBP1L1Q9HC44 474 aaPredicted RBP28.84■■■□□ 2.21
CLTA-206ENST00000466396 RCAN3Q9UKA8 241 aa28.84■■■□□ 2.21
CLTA-206ENST00000466396 WTIPA6NIX2 430 aaPredicted RBP28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms