RNA–Protein interactions for RNA: ENST00000466391.1

LSG1-206, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 791 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-206ENST00000466391 NBPF8Q3BBV2 869 aa11.41□□□□□ -0.58
LSG1-206ENST00000466391 ARSJQ5FYB0 599 aaPredicted RBP11.41□□□□□ -0.58
LSG1-206ENST00000466391 PHLDB3Q6NSJ2 640 aa11.41□□□□□ -0.58
LSG1-206ENST00000466391 BICDL1Q6ZP65 573 aa11.41□□□□□ -0.58
LSG1-206ENST00000466391 CAPN12Q6ZSI9 719 aa11.41□□□□□ -0.58
LSG1-206ENST00000466391 C1orf216Q8TAB5 229 aa11.41□□□□□ -0.58
LSG1-206ENST00000466391 ARID4BQ4LE39 1312 aaPredicted RBP11.4□□□□□ -0.58
LSG1-206ENST00000466391 PDIA4P13667 645 aaKnown RBP11.4□□□□□ -0.58
LSG1-206ENST00000466391 ITGA6P23229 1130 aa11.4□□□□□ -0.58
LSG1-206ENST00000466391 HNRNPMP52272 730 aaKnown RBP eCLIP11.4□□□□□ -0.58
LSG1-206ENST00000466391 B4GALNT3Q6L9W6 998 aa11.4□□□□□ -0.58
LSG1-206ENST00000466391 HOMEZQ8IX15 550 aa11.4□□□□□ -0.58
LSG1-206ENST00000466391 PGBD3Q8N328 593 aa11.4□□□□□ -0.58
LSG1-206ENST00000466391 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.4□□□□□ -0.58
LSG1-206ENST00000466391 CUEDC1Q9NWM3 386 aaPredicted RBP11.4□□□□□ -0.58
LSG1-206ENST00000466391 RTEL1-TNFRSF6BF6WH68 1400 aa11.4□□□□□ -0.58
LSG1-206ENST00000466391 KDM5CP41229 1560 aa11.4□□□□□ -0.58
LSG1-206ENST00000466391 NAA30Q147X3 362 aaPredicted RBP11.39□□□□□ -0.59
LSG1-206ENST00000466391 RHPN1Q8TCX5 695 aa11.39□□□□□ -0.59
LSG1-206ENST00000466391 TRAIPQ9BWF2 469 aa11.39□□□□□ -0.59
LSG1-206ENST00000466391 C1orf53Q5VUE5 145 aa11.38□□□□□ -0.59
LSG1-206ENST00000466391 HIRIP3Q9BW71 556 aaPredicted RBP11.38□□□□□ -0.59
LSG1-206ENST00000466391 ABCA9Q8IUA7 1624 aa11.38□□□□□ -0.59
LSG1-206ENST00000466391 PTCD1O75127 700 aaKnown RBP11.37□□□□□ -0.59
LSG1-206ENST00000466391 ZIC5Q96T25 663 aa11.37□□□□□ -0.59
LSG1-206ENST00000466391 QTRT2Q9H974 415 aaKnown RBP11.37□□□□□ -0.59
LSG1-206ENST00000466391 SEPT3Q9UH03 358 aa11.37□□□□□ -0.59
LSG1-206ENST00000466391 LAMC1P11047 1609 aa11.37□□□□□ -0.59
LSG1-206ENST00000466391 WDR7Q9Y4E6 1490 aa11.37□□□□□ -0.59
LSG1-206ENST00000466391 A0A1W2PNR3 127 aa11.36□□□□□ -0.59
LSG1-206ENST00000466391 CDC14CA4D256 554 aa11.36□□□□□ -0.59
LSG1-206ENST00000466391 H7C1W4 665 aa11.36□□□□□ -0.59
LSG1-206ENST00000466391 DBN1Q16643 649 aa11.36□□□□□ -0.59
LSG1-206ENST00000466391 EFCAB2Q5VUJ9 269 aa11.36□□□□□ -0.59
LSG1-206ENST00000466391 COL26A1Q96A83 441 aa11.36□□□□□ -0.59
LSG1-206ENST00000466391 CRISPLD1Q9H336 500 aa11.36□□□□□ -0.59
LSG1-206ENST00000466391 TERTO14746 1132 aaKnown RBP11.35□□□□□ -0.59
LSG1-206ENST00000466391 RTN1Q16799 776 aa11.35□□□□□ -0.59
LSG1-206ENST00000466391 EFHC2Q5JST6 749 aa11.35□□□□□ -0.59
LSG1-206ENST00000466391 TRIM22Q8IYM9 498 aa11.35□□□□□ -0.59
LSG1-206ENST00000466391 C7orf43Q8WVR3 580 aa11.35□□□□□ -0.59
LSG1-206ENST00000466391 KLRG1Q96E93 195 aa11.35□□□□□ -0.59
LSG1-206ENST00000466391 NUCKS1Q9H1E3 243 aaKnown RBP11.35□□□□□ -0.59
LSG1-206ENST00000466391 NEUROD4Q9HD90 331 aa11.35□□□□□ -0.59
LSG1-206ENST00000466391 GJA3Q9Y6H8 435 aa11.35□□□□□ -0.59
LSG1-206ENST00000466391 DEPDC5O75140 1603 aa11.35□□□□□ -0.59
LSG1-206ENST00000466391 BRD1O95696 1058 aa11.34□□□□□ -0.59
LSG1-206ENST00000466391 VWA5B2Q8N398 1253 aa11.34□□□□□ -0.59
LSG1-206ENST00000466391 SAP130Q9H0E3 1048 aa11.34□□□□□ -0.59
LSG1-206ENST00000466391 ZFYVE16Q7Z3T8 1539 aa11.34□□□□□ -0.59
LSG1-206ENST00000466391 INO80Q9ULG1 1556 aaPredicted RBP11.33□□□□□ -0.6
LSG1-206ENST00000466391 PLA2R1Q13018 1463 aa11.33□□□□□ -0.6
LSG1-206ENST00000466391 ROCK2O75116 1388 aaKnown RBP11.33□□□□□ -0.6
LSG1-206ENST00000466391 USP47Q96K76 1375 aa11.33□□□□□ -0.6
LSG1-206ENST00000466391 H3BM21 787 aa11.33□□□□□ -0.6
LSG1-206ENST00000466391 DGKZQ13574 1117 aa11.33□□□□□ -0.6
LSG1-206ENST00000466391 COX20Q5RI15 118 aa11.33□□□□□ -0.6
LSG1-206ENST00000466391 C16orf46Q6P387 395 aa11.33□□□□□ -0.6
LSG1-206ENST00000466391 LRRC69Q6ZNQ3 347 aa11.33□□□□□ -0.6
LSG1-206ENST00000466391 NPAS3Q8IXF0 933 aa11.33□□□□□ -0.6
LSG1-206ENST00000466391 ZNF837Q96EG3 531 aaPredicted RBP11.33□□□□□ -0.6
LSG1-206ENST00000466391 KLK14Q9P0G3 267 aa11.33□□□□□ -0.6
LSG1-206ENST00000466391 LRFN2Q9ULH4 789 aa11.33□□□□□ -0.6
LSG1-206ENST00000466391 BCORL1Q5H9F3 1711 aa11.32□□□□□ -0.6
LSG1-206ENST00000466391 TRPM1Q7Z4N2 1603 aa11.32□□□□□ -0.6
LSG1-206ENST00000466391 EIF2AK4Q9P2K8 1649 aaKnown RBP11.32□□□□□ -0.6
LSG1-206ENST00000466391 THBS1P07996 1170 aa11.32□□□□□ -0.6
LSG1-206ENST00000466391 MYO19Q96H55 970 aa11.32□□□□□ -0.6
LSG1-206ENST00000466391 HSH2DQ96JZ2 352 aa11.32□□□□□ -0.6
LSG1-206ENST00000466391 GPC6Q9Y625 555 aaPredicted RBP11.32□□□□□ -0.6
LSG1-206ENST00000466391 CCDC144AA2RUR9 1427 aa11.32□□□□□ -0.6
LSG1-206ENST00000466391 NEURL4Q96JN8 1562 aa11.32□□□□□ -0.6
LSG1-206ENST00000466391 KIF7Q2M1P5 1343 aa11.32□□□□□ -0.6
LSG1-206ENST00000466391 GPRASP1Q5JY77 1395 aa11.31□□□□□ -0.6
LSG1-206ENST00000466391 ARID4AP29374 1257 aaPredicted RBP11.31□□□□□ -0.6
LSG1-206ENST00000466391 LBRQ14739 615 aaKnown RBP11.31□□□□□ -0.6
LSG1-206ENST00000466391 SV2AQ7L0J3 742 aa11.31□□□□□ -0.6
LSG1-206ENST00000466391 NLRP8Q86W28 1048 aa11.31□□□□□ -0.6
LSG1-206ENST00000466391 ZNF280CQ8ND82 737 aa11.31□□□□□ -0.6
LSG1-206ENST00000466391 SLC16A10Q8TF71 515 aa11.31□□□□□ -0.6
LSG1-206ENST00000466391 GTPBP3Q969Y2 492 aaKnown RBP11.31□□□□□ -0.6
LSG1-206ENST00000466391 GMCL1Q96IK5 515 aa11.31□□□□□ -0.6
LSG1-206ENST00000466391 SUSD3Q96L08 255 aa11.31□□□□□ -0.6
LSG1-206ENST00000466391 MTMR7Q9Y216 660 aa11.31□□□□□ -0.6
LSG1-206ENST00000466391 TRAPPC8Q9Y2L5 1435 aa11.31□□□□□ -0.6
LSG1-206ENST00000466391 VWDEQ8N2E2 1590 aa11.31□□□□□ -0.6
LSG1-206ENST00000466391 PRAG1Q86YV5 1406 aa11.3□□□□□ -0.6
LSG1-206ENST00000466391 GTF3C2Q8WUA4 911 aaPredicted RBP11.3□□□□□ -0.6
LSG1-206ENST00000466391 ZNF775Q96BV0 537 aaPredicted RBP11.3□□□□□ -0.6
LSG1-206ENST00000466391 C11orf91Q3C1V1 193 aa11.29□□□□□ -0.6
LSG1-206ENST00000466391 NANOS1Q8WY41 292 aaKnown RBP11.29□□□□□ -0.6
LSG1-206ENST00000466391 ZCCHC2Q9C0B9 1178 aaKnown RBP11.29□□□□□ -0.6
LSG1-206ENST00000466391 ANKIB1Q9P2G1 1089 aa11.29□□□□□ -0.6
LSG1-206ENST00000466391 E9PCH4 1651 aa11.28□□□□□ -0.6
LSG1-206ENST00000466391 TET3O43151 1660 aa11.28□□□□□ -0.6
LSG1-206ENST00000466391 A2MP01023 1474 aa11.28□□□□□ -0.6
LSG1-206ENST00000466391 GPR25O00155 361 aa11.28□□□□□ -0.6
LSG1-206ENST00000466391 ABL1P00519 1130 aa11.28□□□□□ -0.6
LSG1-206ENST00000466391 HIF1AQ16665 826 aa11.28□□□□□ -0.6
LSG1-206ENST00000466391 AEBP1Q8IUX7 1158 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms