RNA–Protein interactions for RNA: ENST00000466272.1

SMTN-214, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-214ENST00000466272 PDE8AO60658 829 aa13.88□□□□□ -0.19
SMTN-214ENST00000466272 NBPF7P0C2Y1 421 aaPredicted RBP13.88□□□□□ -0.19
SMTN-214ENST00000466272 HOXA10P31260 410 aaPredicted RBP13.88□□□□□ -0.19
SMTN-214ENST00000466272 TMEM57Q8N5G2 664 aa13.88□□□□□ -0.19
SMTN-214ENST00000466272 SEC31BQ9NQW1 1179 aa13.88□□□□□ -0.19
SMTN-214ENST00000466272 C9orf78Q9NZ63 289 aaPredicted RBP13.88□□□□□ -0.19
SMTN-214ENST00000466272 SNED1Q8TER0 1413 aa13.88□□□□□ -0.19
SMTN-214ENST00000466272 LTBP1Q14766 1721 aa13.87□□□□□ -0.19
SMTN-214ENST00000466272 TIAM2Q8IVF5 1701 aa13.87□□□□□ -0.19
SMTN-214ENST00000466272 IPO8O15397 1037 aaKnown RBP13.87□□□□□ -0.19
SMTN-214ENST00000466272 C21orf2O43822 256 aa13.87□□□□□ -0.19
SMTN-214ENST00000466272 CCT4P50991 539 aaKnown RBP13.87□□□□□ -0.19
SMTN-214ENST00000466272 SF3B3Q15393 1217 aaKnown RBP13.87□□□□□ -0.19
SMTN-214ENST00000466272 FAM161AQ3B820 660 aa13.87□□□□□ -0.19
SMTN-214ENST00000466272 PANK1Q8TE04 598 aa13.87□□□□□ -0.19
SMTN-214ENST00000466272 CNKSR1Q969H4 720 aa13.87□□□□□ -0.19
SMTN-214ENST00000466272 RBM17Q96I25 401 aaKnown RBP13.87□□□□□ -0.19
SMTN-214ENST00000466272 KAZALD1Q96I82 304 aa13.87□□□□□ -0.19
SMTN-214ENST00000466272 MEIS3Q99687 375 aa13.87□□□□□ -0.19
SMTN-214ENST00000466272 CHD4Q14839 1912 aa13.87□□□□□ -0.19
SMTN-214ENST00000466272 UTYO14607 1347 aa13.87□□□□□ -0.19
SMTN-214ENST00000466272 PPEF1O14829 653 aaPredicted RBP13.86□□□□□ -0.19
SMTN-214ENST00000466272 RASSF7Q02833 373 aa13.86□□□□□ -0.19
SMTN-214ENST00000466272 INTS3Q68E01 1043 aaKnown RBP13.86□□□□□ -0.19
SMTN-214ENST00000466272 FTSJ3Q8IY81 847 aaKnown RBP13.86□□□□□ -0.19
SMTN-214ENST00000466272 CELF1Q92879 486 aaKnown RBP13.86□□□□□ -0.19
SMTN-214ENST00000466272 PLA2G12BQ9BX93 195 aa13.86□□□□□ -0.19
SMTN-214ENST00000466272 USP44Q9H0E7 712 aa13.86□□□□□ -0.19
SMTN-214ENST00000466272 GREM2Q9H772 168 aa13.86□□□□□ -0.19
SMTN-214ENST00000466272 DUOX1Q9NRD9 1551 aa13.86□□□□□ -0.19
SMTN-214ENST00000466272 SBF1O95248 1867 aa13.86□□□□□ -0.19
SMTN-214ENST00000466272 CCDC88AQ3V6T2 1871 aa13.86□□□□□ -0.19
SMTN-214ENST00000466272 FOXO4P98177 505 aa13.85□□□□□ -0.19
SMTN-214ENST00000466272 GRAPQ13588 217 aa13.85□□□□□ -0.19
SMTN-214ENST00000466272 CCDC152Q4G0S7 254 aa13.85□□□□□ -0.19
SMTN-214ENST00000466272 C20orf194Q5TEA3 1177 aa13.85□□□□□ -0.19
SMTN-214ENST00000466272 DDX46Q7L014 1031 aaKnown RBP13.85□□□□□ -0.19
SMTN-214ENST00000466272 DZIP1LQ8IYY4 767 aaKnown RBP13.85□□□□□ -0.19
SMTN-214ENST00000466272 TTLL11Q8NHH1 800 aa13.85□□□□□ -0.19
SMTN-214ENST00000466272 GRAPLQ8TC17 118 aaPredicted RBP13.85□□□□□ -0.19
SMTN-214ENST00000466272 CRAMP1Q96RY5 1269 aa13.85□□□□□ -0.19
SMTN-214ENST00000466272 NFKBIEO00221 500 aa13.84□□□□□ -0.19
SMTN-214ENST00000466272 ANKRD44Q8N8A2 993 aa13.84□□□□□ -0.19
SMTN-214ENST00000466272 C7orf43Q8WVR3 580 aa13.84□□□□□ -0.19
SMTN-214ENST00000466272 BICC1Q9H694 974 aaKnown RBP13.84□□□□□ -0.19
SMTN-214ENST00000466272 RTL9Q8NET4 1388 aa13.83□□□□□ -0.19
SMTN-214ENST00000466272 ALDH1B1P30837 517 aa13.83□□□□□ -0.2
SMTN-214ENST00000466272 PRELPP51888 382 aa13.83□□□□□ -0.2
SMTN-214ENST00000466272 LMBR1LQ6UX01 489 aa13.83□□□□□ -0.2
SMTN-214ENST00000466272 ARHGAP27Q6ZUM4 889 aa13.83□□□□□ -0.2
SMTN-214ENST00000466272 ITPRIPQ8IWB1 547 aa13.83□□□□□ -0.2
SMTN-214ENST00000466272 CHMP3Q9Y3E7 222 aa13.83□□□□□ -0.2
SMTN-214ENST00000466272 GRIN3BO60391 1043 aa13.82□□□□□ -0.2
SMTN-214ENST00000466272 CSF1RP07333 972 aa13.82□□□□□ -0.2
SMTN-214ENST00000466272 UBTFL1P0CB47 393 aaPredicted RBP13.82□□□□□ -0.2
SMTN-214ENST00000466272 HSP90B1P14625 803 aaKnown RBP13.82□□□□□ -0.2
SMTN-214ENST00000466272 ITGA6P23229 1130 aa13.82□□□□□ -0.2
SMTN-214ENST00000466272 RRP1P56182 461 aaKnown RBP13.82□□□□□ -0.2
SMTN-214ENST00000466272 LRRFIP2Q9Y608 721 aaKnown RBP13.82□□□□□ -0.2
SMTN-214ENST00000466272 DICER1Q9UPY3 1922 aaKnown RBP13.82□□□□□ -0.2
SMTN-214ENST00000466272 COL4A5P29400 1685 aa13.82□□□□□ -0.2
SMTN-214ENST00000466272 DCAF8L1A6NGE4 600 aa13.81□□□□□ -0.2
SMTN-214ENST00000466272 CCDC93Q567U6 631 aa13.81□□□□□ -0.2
SMTN-214ENST00000466272 C1orf115Q9H7X2 142 aa13.81□□□□□ -0.2
SMTN-214ENST00000466272 RABL6Q3YEC7 729 aaPredicted RBP13.8□□□□□ -0.2
SMTN-214ENST00000466272 ZNF594Q96JF6 807 aaPredicted RBP13.8□□□□□ -0.2
SMTN-214ENST00000466272 COG6Q9Y2V7 657 aa13.8□□□□□ -0.2
SMTN-214ENST00000466272 ATP6V0A2Q9Y487 856 aa13.8□□□□□ -0.2
SMTN-214ENST00000466272 ANKRD18AQ8IVF6 992 aa13.79□□□□□ -0.2
SMTN-214ENST00000466272 TAOK3Q9H2K8 898 aa13.79□□□□□ -0.2
SMTN-214ENST00000466272 GNAI3P08754 354 aa13.78□□□□□ -0.2
SMTN-214ENST00000466272 RPS8P62241 208 aaKnown RBP13.78□□□□□ -0.2
SMTN-214ENST00000466272 MVPQ14764 893 aaKnown RBP13.78□□□□□ -0.2
SMTN-214ENST00000466272 KLHDC4Q8TBB5 520 aa13.78□□□□□ -0.2
SMTN-214ENST00000466272 GPR101Q96P66 508 aaPredicted RBP13.78□□□□□ -0.2
SMTN-214ENST00000466272 CDC5LQ99459 802 aaKnown RBP13.78□□□□□ -0.2
SMTN-214ENST00000466272 ANKRD18BA2A2Z9 1011 aa13.77□□□□□ -0.21
SMTN-214ENST00000466272 BBOX1O75936 387 aa13.77□□□□□ -0.21
SMTN-214ENST00000466272 GPSM2P81274 684 aa13.77□□□□□ -0.21
SMTN-214ENST00000466272 FKBP4Q02790 459 aaKnown RBP eCLIP13.77□□□□□ -0.21
SMTN-214ENST00000466272 IFIT5Q13325 482 aaKnown RBP13.77□□□□□ -0.21
SMTN-214ENST00000466272 SOGA3Q5TF21 947 aa13.77□□□□□ -0.21
SMTN-214ENST00000466272 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.77□□□□□ -0.21
SMTN-214ENST00000466272 ZNF277Q9NRM2 450 aaPredicted RBP13.77□□□□□ -0.21
SMTN-214ENST00000466272 LTBP3Q9NS15 1303 aa13.76□□□□□ -0.21
SMTN-214ENST00000466272 ZBTB7BO15156 539 aaPredicted RBP13.76□□□□□ -0.21
SMTN-214ENST00000466272 IGHMBP2P38935 993 aaKnown RBP13.76□□□□□ -0.21
SMTN-214ENST00000466272 RFX5P48382 616 aaPredicted RBP13.76□□□□□ -0.21
SMTN-214ENST00000466272 C9orf131Q5VYM1 1079 aa13.76□□□□□ -0.21
SMTN-214ENST00000466272 TMC4Q7Z404 712 aa13.76□□□□□ -0.21
SMTN-214ENST00000466272 SP8Q8IXZ3 490 aa13.76□□□□□ -0.21
SMTN-214ENST00000466272 RNF181Q9P0P0 153 aa13.76□□□□□ -0.21
SMTN-214ENST00000466272 WTIPA6NIX2 430 aaPredicted RBP13.75□□□□□ -0.21
SMTN-214ENST00000466272 GNAI2P04899 355 aa13.75□□□□□ -0.21
SMTN-214ENST00000466272 MS4A1P11836 297 aa13.75□□□□□ -0.21
SMTN-214ENST00000466272 PDE3AQ14432 1141 aa13.75□□□□□ -0.21
SMTN-214ENST00000466272 CCDC57Q2TAC2 916 aa13.75□□□□□ -0.21
SMTN-214ENST00000466272 TAF7LQ5H9L4 462 aa13.75□□□□□ -0.21
SMTN-214ENST00000466272 CC2D2BQ6DHV5 1058 aa13.75□□□□□ -0.21
SMTN-214ENST00000466272 DPP8Q6V1X1 898 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms