RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 TAOK3Q9H2K8 898 aa12.44□□□□□ -0.42
RTFDC1-205ENST00000466260 GPBP1L1Q9HC44 474 aaPredicted RBP12.44□□□□□ -0.42
RTFDC1-205ENST00000466260 CWC25Q9NXE8 425 aaPredicted RBP12.44□□□□□ -0.42
RTFDC1-205ENST00000466260 ABCC4O15439 1325 aa12.43□□□□□ -0.42
RTFDC1-205ENST00000466260 F6X3S4 739 aa12.43□□□□□ -0.42
RTFDC1-205ENST00000466260 IRS4O14654 1257 aaPredicted RBP12.43□□□□□ -0.42
RTFDC1-205ENST00000466260 LMNB1P20700 586 aa12.43□□□□□ -0.42
RTFDC1-205ENST00000466260 IGKV5-2P06315 115 aa12.42□□□□□ -0.42
RTFDC1-205ENST00000466260 SLC10A5Q5PT55 438 aa12.42□□□□□ -0.42
RTFDC1-205ENST00000466260 SOGA3Q5TF21 947 aa12.42□□□□□ -0.42
RTFDC1-205ENST00000466260 DDX46Q7L014 1031 aaKnown RBP12.42□□□□□ -0.42
RTFDC1-205ENST00000466260 CCDC191Q8NCU4 936 aa12.42□□□□□ -0.42
RTFDC1-205ENST00000466260 DNAAF4Q8WXU2 420 aa12.42□□□□□ -0.42
RTFDC1-205ENST00000466260 LRRC37AA6NMS7 1700 aa12.42□□□□□ -0.42
RTFDC1-205ENST00000466260 NEURL1BA8MQ27 555 aa12.41□□□□□ -0.42
RTFDC1-205ENST00000466260 SLC4A10Q6U841 1118 aa12.41□□□□□ -0.42
RTFDC1-205ENST00000466260 ZBTB38Q8NAP3 1195 aaPredicted RBP12.41□□□□□ -0.42
RTFDC1-205ENST00000466260 CRAMP1Q96RY5 1269 aa12.41□□□□□ -0.42
RTFDC1-205ENST00000466260 PCCAP05165 728 aaPredicted RBP12.4□□□□□ -0.42
RTFDC1-205ENST00000466260 HOXA10P31260 410 aaPredicted RBP12.4□□□□□ -0.42
RTFDC1-205ENST00000466260 FKBP4Q02790 459 aaKnown RBP eCLIP12.4□□□□□ -0.42
RTFDC1-205ENST00000466260 TRIM28Q13263 835 aaKnown RBP12.4□□□□□ -0.42
RTFDC1-205ENST00000466260 C7orf43Q8WVR3 580 aa12.4□□□□□ -0.42
RTFDC1-205ENST00000466260 TMX4Q9H1E5 349 aaPredicted RBP12.4□□□□□ -0.42
RTFDC1-205ENST00000466260 ZNF277Q9NRM2 450 aaPredicted RBP12.4□□□□□ -0.42
RTFDC1-205ENST00000466260 GRAPQ13588 217 aa12.39□□□□□ -0.43
RTFDC1-205ENST00000466260 UBE3BQ7Z3V4 1068 aa12.39□□□□□ -0.43
RTFDC1-205ENST00000466260 GRAPLQ8TC17 118 aaPredicted RBP12.39□□□□□ -0.43
RTFDC1-205ENST00000466260 CELF1Q92879 486 aaKnown RBP12.39□□□□□ -0.43
RTFDC1-205ENST00000466260 NMRK2Q9NPI5 230 aa12.39□□□□□ -0.43
RTFDC1-205ENST00000466260 SMC4Q9NTJ3 1288 aa12.39□□□□□ -0.43
RTFDC1-205ENST00000466260 LTBP3Q9NS15 1303 aa12.38□□□□□ -0.43
RTFDC1-205ENST00000466260 PDE8AO60658 829 aa12.38□□□□□ -0.43
RTFDC1-205ENST00000466260 RTKN2Q8IZC4 609 aa12.38□□□□□ -0.43
RTFDC1-205ENST00000466260 MRPL50Q8N5N7 158 aaKnown RBP12.38□□□□□ -0.43
RTFDC1-205ENST00000466260 SSH1Q8WYL5 1049 aa12.38□□□□□ -0.43
RTFDC1-205ENST00000466260 SEC31BQ9NQW1 1179 aa12.38□□□□□ -0.43
RTFDC1-205ENST00000466260 IARSP41252 1262 aaKnown RBP12.37□□□□□ -0.43
RTFDC1-205ENST00000466260 LINS1Q8NG48 757 aa12.37□□□□□ -0.43
RTFDC1-205ENST00000466260 SNED1Q8TER0 1413 aa12.37□□□□□ -0.43
RTFDC1-205ENST00000466260 KDM2BQ8NHM5 1336 aa12.37□□□□□ -0.43
RTFDC1-205ENST00000466260 CDHR2Q9BYE9 1310 aa12.37□□□□□ -0.43
RTFDC1-205ENST00000466260 COL4A5P29400 1685 aa12.36□□□□□ -0.43
RTFDC1-205ENST00000466260 HSP90B1P14625 803 aaKnown RBP12.36□□□□□ -0.43
RTFDC1-205ENST00000466260 CTSWP56202 376 aa12.36□□□□□ -0.43
RTFDC1-205ENST00000466260 GCKRQ14397 625 aa12.36□□□□□ -0.43
RTFDC1-205ENST00000466260 SF3B3Q15393 1217 aaKnown RBP12.36□□□□□ -0.43
RTFDC1-205ENST00000466260 CCDC152Q4G0S7 254 aa12.36□□□□□ -0.43
RTFDC1-205ENST00000466260 RRAGCQ9HB90 399 aa12.36□□□□□ -0.43
RTFDC1-205ENST00000466260 ATP6V0A2Q9Y487 856 aa12.36□□□□□ -0.43
RTFDC1-205ENST00000466260 A0A1B0GUL6 1792 aa12.35□□□□□ -0.43
RTFDC1-205ENST00000466260 DUOX1Q9NRD9 1551 aa12.35□□□□□ -0.43
RTFDC1-205ENST00000466260 WDR90Q96KV7 1748 aa12.35□□□□□ -0.43
RTFDC1-205ENST00000466260 PPIP5K2O43314 1243 aa12.35□□□□□ -0.43
RTFDC1-205ENST00000466260 BBOX1O75936 387 aa12.35□□□□□ -0.43
RTFDC1-205ENST00000466260 AOC3Q16853 763 aa12.35□□□□□ -0.43
RTFDC1-205ENST00000466260 BEND3Q5T5X7 828 aa12.35□□□□□ -0.43
RTFDC1-205ENST00000466260 CC2D2BQ6DHV5 1058 aa12.35□□□□□ -0.43
RTFDC1-205ENST00000466260 DPP8Q6V1X1 898 aaPredicted RBP12.35□□□□□ -0.43
RTFDC1-205ENST00000466260 TRMT2AQ8IZ69 625 aaKnown RBP12.35□□□□□ -0.43
RTFDC1-205ENST00000466260 MPNDQ8N594 471 aa12.35□□□□□ -0.43
RTFDC1-205ENST00000466260 CHMP3Q9Y3E7 222 aa12.35□□□□□ -0.43
RTFDC1-205ENST00000466260 LTBP1Q14766 1721 aa12.34□□□□□ -0.43
RTFDC1-205ENST00000466260 KIF3CO14782 793 aa12.34□□□□□ -0.43
RTFDC1-205ENST00000466260 DDNO94850 711 aaPredicted RBP12.34□□□□□ -0.43
RTFDC1-205ENST00000466260 DPY19L2Q6NUT2 758 aa12.34□□□□□ -0.43
RTFDC1-205ENST00000466260 SP8Q8IXZ3 490 aa12.34□□□□□ -0.43
RTFDC1-205ENST00000466260 LARGE2Q8N3Y3 721 aa12.34□□□□□ -0.43
RTFDC1-205ENST00000466260 PSMD1Q99460 953 aa12.34□□□□□ -0.43
RTFDC1-205ENST00000466260 SRCIN1Q9C0H9 1055 aa12.34□□□□□ -0.43
RTFDC1-205ENST00000466260 GREM2Q9H772 168 aa12.34□□□□□ -0.43
RTFDC1-205ENST00000466260 C9orf78Q9NZ63 289 aaPredicted RBP12.34□□□□□ -0.43
RTFDC1-205ENST00000466260 NSFL1CQ9UNZ2 370 aaKnown RBP12.34□□□□□ -0.43
RTFDC1-205ENST00000466260 ZNF541Q9H0D2 1346 aa12.34□□□□□ -0.43
RTFDC1-205ENST00000466260 ZC3H4Q9UPT8 1303 aaKnown RBP12.34□□□□□ -0.43
RTFDC1-205ENST00000466260 GLTPD2A6NH11 291 aa12.33□□□□□ -0.44
RTFDC1-205ENST00000466260 H7C1W4 665 aa12.33□□□□□ -0.44
RTFDC1-205ENST00000466260 FAM161AQ3B820 660 aa12.33□□□□□ -0.44
RTFDC1-205ENST00000466260 ALDH1L2Q3SY69 923 aa12.33□□□□□ -0.44
RTFDC1-205ENST00000466260 ANKRD18AQ8IVF6 992 aa12.33□□□□□ -0.44
RTFDC1-205ENST00000466260 C16orf71Q8IYS4 520 aaPredicted RBP12.33□□□□□ -0.44
RTFDC1-205ENST00000466260 JDP2Q8WYK2 163 aa12.33□□□□□ -0.44
RTFDC1-205ENST00000466260 GPR101Q96P66 508 aaPredicted RBP12.33□□□□□ -0.44
RTFDC1-205ENST00000466260 PTPRCP08575 1304 aa12.33□□□□□ -0.44
RTFDC1-205ENST00000466260 C6orf229H3BNL8 230 aa12.32□□□□□ -0.44
RTFDC1-205ENST00000466260 RIMBP2O15034 1052 aa12.32□□□□□ -0.44
RTFDC1-205ENST00000466260 C1QTNF8P60827 252 aa12.32□□□□□ -0.44
RTFDC1-205ENST00000466260 RPS8P62241 208 aaKnown RBP12.32□□□□□ -0.44
RTFDC1-205ENST00000466260 GPSM2P81274 684 aa12.32□□□□□ -0.44
RTFDC1-205ENST00000466260 NIM1KQ8IY84 436 aa12.32□□□□□ -0.44
RTFDC1-205ENST00000466260 TTLL11Q8NHH1 800 aa12.32□□□□□ -0.44
RTFDC1-205ENST00000466260 NOB1Q9ULX3 412 aaKnown RBP12.32□□□□□ -0.44
RTFDC1-205ENST00000466260 GJA3Q9Y6H8 435 aa12.32□□□□□ -0.44
RTFDC1-205ENST00000466260 SCN4AP35499 1836 aa12.32□□□□□ -0.44
RTFDC1-205ENST00000466260 GRM8O00222 908 aa12.31□□□□□ -0.44
RTFDC1-205ENST00000466260 CASP7P55210 303 aa12.31□□□□□ -0.44
RTFDC1-205ENST00000466260 EIF6P56537 245 aaKnown RBP12.31□□□□□ -0.44
RTFDC1-205ENST00000466260 TMC4Q7Z404 712 aa12.31□□□□□ -0.44
RTFDC1-205ENST00000466260 SUPT20HQ8NEM7 779 aa12.31□□□□□ -0.44
RTFDC1-205ENST00000466260 CDC5LQ99459 802 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms