RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 DDNO94850 711 aaPredicted RBP12.99□□□□□ -0.33
CD40-204ENST00000466205 SLC4A10Q6U841 1118 aa12.99□□□□□ -0.33
CD40-204ENST00000466205 ATP6V0A2Q9Y487 856 aa12.99□□□□□ -0.33
CD40-204ENST00000466205 ZNF541Q9H0D2 1346 aa12.98□□□□□ -0.33
CD40-204ENST00000466205 GLTPD2A6NH11 291 aa12.98□□□□□ -0.33
CD40-204ENST00000466205 PDE8AO60658 829 aa12.98□□□□□ -0.33
CD40-204ENST00000466205 SF3B3Q15393 1217 aaKnown RBP12.98□□□□□ -0.33
CD40-204ENST00000466205 UBE3BQ7Z3V4 1068 aa12.98□□□□□ -0.33
CD40-204ENST00000466205 C16orf71Q8IYS4 520 aaPredicted RBP12.98□□□□□ -0.33
CD40-204ENST00000466205 ZC3H4Q9UPT8 1303 aaKnown RBP12.97□□□□□ -0.33
CD40-204ENST00000466205 COL4A5P29400 1685 aa12.97□□□□□ -0.33
CD40-204ENST00000466205 BBOX1O75936 387 aa12.97□□□□□ -0.33
CD40-204ENST00000466205 HNRNPUQ00839 825 aaKnown RBP eCLIP12.97□□□□□ -0.33
CD40-204ENST00000466205 AOC3Q16853 763 aa12.97□□□□□ -0.33
CD40-204ENST00000466205 CC2D2BQ6DHV5 1058 aa12.97□□□□□ -0.33
CD40-204ENST00000466205 DPY19L2Q6NUT2 758 aa12.97□□□□□ -0.33
CD40-204ENST00000466205 DPP8Q6V1X1 898 aaPredicted RBP12.97□□□□□ -0.33
CD40-204ENST00000466205 LARGE2Q8N3Y3 721 aa12.97□□□□□ -0.33
CD40-204ENST00000466205 MRPL50Q8N5N7 158 aaKnown RBP12.97□□□□□ -0.33
CD40-204ENST00000466205 DICER1Q9UPY3 1922 aaKnown RBP12.96□□□□□ -0.33
CD40-204ENST00000466205 PPIP5K2O43314 1243 aa12.96□□□□□ -0.33
CD40-204ENST00000466205 GCKRQ14397 625 aa12.96□□□□□ -0.33
CD40-204ENST00000466205 CCDC152Q4G0S7 254 aa12.96□□□□□ -0.33
CD40-204ENST00000466205 SP8Q8IXZ3 490 aa12.96□□□□□ -0.33
CD40-204ENST00000466205 MPNDQ8N594 471 aa12.96□□□□□ -0.33
CD40-204ENST00000466205 LINS1Q8NG48 757 aa12.96□□□□□ -0.33
CD40-204ENST00000466205 SSH1Q8WYL5 1049 aa12.96□□□□□ -0.33
CD40-204ENST00000466205 GPR101Q96P66 508 aaPredicted RBP12.96□□□□□ -0.33
CD40-204ENST00000466205 PSMD1Q99460 953 aa12.96□□□□□ -0.33
CD40-204ENST00000466205 CDHR2Q9BYE9 1310 aa12.95□□□□□ -0.34
CD40-204ENST00000466205 H7C1W4 665 aa12.95□□□□□ -0.34
CD40-204ENST00000466205 CTSWP56202 376 aa12.95□□□□□ -0.34
CD40-204ENST00000466205 GPSM2P81274 684 aa12.95□□□□□ -0.34
CD40-204ENST00000466205 BEND3Q5T5X7 828 aa12.95□□□□□ -0.34
CD40-204ENST00000466205 JDP2Q8WYK2 163 aa12.95□□□□□ -0.34
CD40-204ENST00000466205 GREM2Q9H772 168 aa12.95□□□□□ -0.34
CD40-204ENST00000466205 NSFL1CQ9UNZ2 370 aaKnown RBP12.95□□□□□ -0.34
CD40-204ENST00000466205 GJA3Q9Y6H8 435 aa12.95□□□□□ -0.34
CD40-204ENST00000466205 RIMBP2O15034 1052 aa12.94□□□□□ -0.34
CD40-204ENST00000466205 RPS8P62241 208 aaKnown RBP12.94□□□□□ -0.34
CD40-204ENST00000466205 SMC4Q9NTJ3 1288 aa12.94□□□□□ -0.34
CD40-204ENST00000466205 POTECB2RU33 542 aa12.93□□□□□ -0.34
CD40-204ENST00000466205 C6orf229H3BNL8 230 aa12.93□□□□□ -0.34
CD40-204ENST00000466205 TOMM70O94826 608 aa12.93□□□□□ -0.34
CD40-204ENST00000466205 HSP90B1P14625 803 aaKnown RBP12.93□□□□□ -0.34
CD40-204ENST00000466205 CASP7P55210 303 aa12.93□□□□□ -0.34
CD40-204ENST00000466205 NIM1KQ8IY84 436 aa12.93□□□□□ -0.34
CD40-204ENST00000466205 TRMT2AQ8IZ69 625 aaKnown RBP12.93□□□□□ -0.34
CD40-204ENST00000466205 TTLL11Q8NHH1 800 aa12.93□□□□□ -0.34
CD40-204ENST00000466205 CHMP3Q9Y3E7 222 aa12.93□□□□□ -0.34
CD40-204ENST00000466205 DUOX1Q9NRD9 1551 aa12.93□□□□□ -0.34
CD40-204ENST00000466205 LRRC37AA6NMS7 1700 aa12.92□□□□□ -0.34
CD40-204ENST00000466205 FZD9O00144 591 aa12.92□□□□□ -0.34
CD40-204ENST00000466205 VEGFAP15692 232 aaPredicted RBP12.92□□□□□ -0.34
CD40-204ENST00000466205 EIF6P56537 245 aaKnown RBP12.92□□□□□ -0.34
CD40-204ENST00000466205 FAM161AQ3B820 660 aa12.92□□□□□ -0.34
CD40-204ENST00000466205 GRIPAP1Q4V328 841 aa12.92□□□□□ -0.34
CD40-204ENST00000466205 ANKRD18AQ8IVF6 992 aa12.92□□□□□ -0.34
CD40-204ENST00000466205 SUPT20HQ8NEM7 779 aa12.92□□□□□ -0.34
CD40-204ENST00000466205 WDR90Q96KV7 1748 aa12.92□□□□□ -0.34
CD40-204ENST00000466205 SRCIN1Q9C0H9 1055 aa12.92□□□□□ -0.34
CD40-204ENST00000466205 SPEF2Q9C093 1822 aa12.92□□□□□ -0.34
CD40-204ENST00000466205 CACNA1FO60840 1977 aa12.91□□□□□ -0.34
CD40-204ENST00000466205 POTEIP0CG38 1075 aa12.91□□□□□ -0.34
CD40-204ENST00000466205 POTEJP0CG39 1038 aa12.91□□□□□ -0.34
CD40-204ENST00000466205 TMC4Q7Z404 712 aa12.91□□□□□ -0.34
CD40-204ENST00000466205 RTFDC1Q9BY42 306 aaPredicted RBP12.91□□□□□ -0.34
CD40-204ENST00000466205 C9orf78Q9NZ63 289 aaPredicted RBP12.91□□□□□ -0.34
CD40-204ENST00000466205 ANKIB1Q9P2G1 1089 aa12.91□□□□□ -0.34
CD40-204ENST00000466205 POLLQ9UGP5 575 aa12.91□□□□□ -0.34
CD40-204ENST00000466205 GRM8O00222 908 aa12.9□□□□□ -0.34
CD40-204ENST00000466205 UFL1O94874 794 aa12.9□□□□□ -0.34
CD40-204ENST00000466205 ITGA6P23229 1130 aa12.9□□□□□ -0.34
CD40-204ENST00000466205 DOK7Q18PE1 504 aa12.9□□□□□ -0.34
CD40-204ENST00000466205 WASHC4Q2M389 1173 aa12.9□□□□□ -0.34
CD40-204ENST00000466205 EAPPQ56P03 285 aaPredicted RBP12.9□□□□□ -0.34
CD40-204ENST00000466205 EPHA10Q5JZY3 1008 aa12.9□□□□□ -0.34
CD40-204ENST00000466205 CDC5LQ99459 802 aaKnown RBP12.9□□□□□ -0.34
CD40-204ENST00000466205 DBNDD1Q9H9R9 158 aa12.9□□□□□ -0.34
CD40-204ENST00000466205 NOB1Q9ULX3 412 aaKnown RBP12.9□□□□□ -0.34
CD40-204ENST00000466205 WTIPA6NIX2 430 aaPredicted RBP12.89□□□□□ -0.35
CD40-204ENST00000466205 RAD17O75943 681 aa12.89□□□□□ -0.35
CD40-204ENST00000466205 FOXO4P98177 505 aa12.89□□□□□ -0.35
CD40-204ENST00000466205 KIAA2012Q0VF49 1180 aa12.89□□□□□ -0.35
CD40-204ENST00000466205 ALDH1L2Q3SY69 923 aa12.89□□□□□ -0.35
CD40-204ENST00000466205 TBC1D16Q8TBP0 767 aa12.89□□□□□ -0.35
CD40-204ENST00000466205 RBM46Q8TBY0 533 aaKnown RBP12.89□□□□□ -0.35
CD40-204ENST00000466205 SUCLG2Q96I99 432 aa12.89□□□□□ -0.35
CD40-204ENST00000466205 PLA2G12BQ9BX93 195 aa12.89□□□□□ -0.35
CD40-204ENST00000466205 MYH3P11055 1940 aa12.89□□□□□ -0.35
CD40-204ENST00000466205 PTPRCP08575 1304 aa12.88□□□□□ -0.35
CD40-204ENST00000466205 CEP350Q5VT06 3117 aa12.88□□□□□ -0.35
CD40-204ENST00000466205 YDJCA8MPS7 323 aa12.88□□□□□ -0.35
CD40-204ENST00000466205 NBPF7P0C2Y1 421 aaPredicted RBP12.88□□□□□ -0.35
CD40-204ENST00000466205 IGHMBP2P38935 993 aaKnown RBP12.88□□□□□ -0.35
CD40-204ENST00000466205 HTRA3P83110 453 aa12.88□□□□□ -0.35
CD40-204ENST00000466205 LMBR1LQ6UX01 489 aa12.88□□□□□ -0.35
CD40-204ENST00000466205 GPC2Q8N158 579 aa12.88□□□□□ -0.35
CD40-204ENST00000466205 GGA1Q9UJY5 639 aa12.88□□□□□ -0.35
CD40-204ENST00000466205 ZNRF3Q9ULT6 936 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms