RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 BBOX1O75936 387 aa23.2■■□□□ 1.3
HOXA9-203ENST00000465941 CLUAP1Q96AJ1 413 aa23.2■■□□□ 1.3
HOXA9-203ENST00000465941 TNNQ9UQP3 1299 aa23.2■■□□□ 1.3
HOXA9-203ENST00000465941 C21orf2O43822 256 aa23.19■■□□□ 1.3
HOXA9-203ENST00000465941 CSF1RP07333 972 aa23.19■■□□□ 1.3
HOXA9-203ENST00000465941 FOXO4P98177 505 aa23.19■■□□□ 1.3
HOXA9-203ENST00000465941 GRAPQ13588 217 aa23.19■■□□□ 1.3
HOXA9-203ENST00000465941 GRAPLQ8TC17 118 aaPredicted RBP23.19■■□□□ 1.3
HOXA9-203ENST00000465941 SOGA3Q5TF21 947 aa23.18■■□□□ 1.3
HOXA9-203ENST00000465941 DZIP1LQ8IYY4 767 aaKnown RBP23.18■■□□□ 1.3
HOXA9-203ENST00000465941 RTL9Q8NET4 1388 aa23.17■■□□□ 1.3
HOXA9-203ENST00000465941 ARHGAP27Q6ZUM4 889 aa23.17■■□□□ 1.3
HOXA9-203ENST00000465941 ARFGEF1Q9Y6D6 1849 aa23.17■■□□□ 1.3
HOXA9-203ENST00000465941 GOLGB1Q14789 3259 aaKnown RBP23.16■■□□□ 1.3
HOXA9-203ENST00000465941 PPEF1O14829 653 aaPredicted RBP23.16■■□□□ 1.3
HOXA9-203ENST00000465941 MS4A1P11836 297 aa23.16■■□□□ 1.3
HOXA9-203ENST00000465941 FTSJ3Q8IY81 847 aaKnown RBP23.16■■□□□ 1.3
HOXA9-203ENST00000465941 TMEM57Q8N5G2 664 aa23.16■■□□□ 1.3
HOXA9-203ENST00000465941 KAZALD1Q96I82 304 aa23.16■■□□□ 1.3
HOXA9-203ENST00000465941 SUCLG2Q96I99 432 aa23.16■■□□□ 1.3
HOXA9-203ENST00000465941 ZNF219Q9P2Y4 722 aaPredicted RBP23.16■■□□□ 1.3
HOXA9-203ENST00000465941 SLX4Q8IY92 1834 aa23.16■■□□□ 1.3
HOXA9-203ENST00000465941 RPS8P62241 208 aaKnown RBP23.15■■□□□ 1.3
HOXA9-203ENST00000465941 EPHA10Q5JZY3 1008 aa23.15■■□□□ 1.3
HOXA9-203ENST00000465941 CC2D2BQ6DHV5 1058 aa23.15■■□□□ 1.3
HOXA9-203ENST00000465941 TMC4Q7Z404 712 aa23.15■■□□□ 1.3
HOXA9-203ENST00000465941 CCDC85AQ96PX6 553 aaPredicted RBP23.15■■□□□ 1.3
HOXA9-203ENST00000465941 GREM2Q9H772 168 aa23.15■■□□□ 1.3
HOXA9-203ENST00000465941 SEC31BQ9NQW1 1179 aa23.15■■□□□ 1.3
HOXA9-203ENST00000465941 ATP6V0A2Q9Y487 856 aa23.15■■□□□ 1.3
HOXA9-203ENST00000465941 RLBP1P12271 317 aa23.14■■□□□ 1.29
HOXA9-203ENST00000465941 CELF1Q92879 486 aaKnown RBP23.14■■□□□ 1.29
HOXA9-203ENST00000465941 UBTFL1P0CB47 393 aaPredicted RBP23.13■■□□□ 1.29
HOXA9-203ENST00000465941 GRIPAP1Q4V328 841 aa23.13■■□□□ 1.29
HOXA9-203ENST00000465941 CCDC93Q567U6 631 aa23.13■■□□□ 1.29
HOXA9-203ENST00000465941 LMBR1LQ6UX01 489 aa23.13■■□□□ 1.29
HOXA9-203ENST00000465941 SP8Q8IXZ3 490 aa23.13■■□□□ 1.29
HOXA9-203ENST00000465941 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.13■■□□□ 1.29
HOXA9-203ENST00000465941 HDAC5Q9UQL6 1122 aa23.13■■□□□ 1.29
HOXA9-203ENST00000465941 PLIN1O60240 522 aa23.12■■□□□ 1.29
HOXA9-203ENST00000465941 GNAI3P08754 354 aa23.12■■□□□ 1.29
HOXA9-203ENST00000465941 RABL6Q3YEC7 729 aaPredicted RBP23.12■■□□□ 1.29
HOXA9-203ENST00000465941 RTKN2Q8IZC4 609 aa23.12■■□□□ 1.29
HOXA9-203ENST00000465941 CDC5LQ99459 802 aaKnown RBP23.12■■□□□ 1.29
HOXA9-203ENST00000465941 MEIS3Q99687 375 aa23.12■■□□□ 1.29
HOXA9-203ENST00000465941 ITGA6P23229 1130 aa23.11■■□□□ 1.29
HOXA9-203ENST00000465941 FAM161AQ3B820 660 aa23.11■■□□□ 1.29
HOXA9-203ENST00000465941 OLFM4Q6UX06 510 aa23.11■■□□□ 1.29
HOXA9-203ENST00000465941 TMX4Q9H1E5 349 aaPredicted RBP23.11■■□□□ 1.29
HOXA9-203ENST00000465941 BICC1Q9H694 974 aaKnown RBP23.11■■□□□ 1.29
HOXA9-203ENST00000465941 NFKBIEO00221 500 aa23.1■■□□□ 1.29
HOXA9-203ENST00000465941 ANKRD18AQ8IVF6 992 aa23.1■■□□□ 1.29
HOXA9-203ENST00000465941 PANK1Q8TE04 598 aa23.1■■□□□ 1.29
HOXA9-203ENST00000465941 LTBP3Q9NS15 1303 aa23.09■■□□□ 1.29
HOXA9-203ENST00000465941 ANKRD18BA2A2Z9 1011 aa23.09■■□□□ 1.29
HOXA9-203ENST00000465941 IFIT5Q13325 482 aaKnown RBP23.09■■□□□ 1.29
HOXA9-203ENST00000465941 ITPRIPQ8IWB1 547 aa23.09■■□□□ 1.29
HOXA9-203ENST00000465941 ANKRD44Q8N8A2 993 aa23.09■■□□□ 1.29
HOXA9-203ENST00000465941 SNED1Q8TER0 1413 aa23.08■■□□□ 1.29
HOXA9-203ENST00000465941 MYH3P11055 1940 aa23.08■■□□□ 1.29
HOXA9-203ENST00000465941 PDE3AQ14432 1141 aa23.08■■□□□ 1.29
HOXA9-203ENST00000465941 CCDC57Q2TAC2 916 aa23.08■■□□□ 1.29
HOXA9-203ENST00000465941 CACNA1SQ13698 1873 aa23.07■■□□□ 1.28
HOXA9-203ENST00000465941 ZBTB7BO15156 539 aaPredicted RBP23.07■■□□□ 1.28
HOXA9-203ENST00000465941 TAOK3Q9H2K8 898 aa23.07■■□□□ 1.28
HOXA9-203ENST00000465941 BSDC1Q9NW68 430 aaPredicted RBP23.07■■□□□ 1.28
HOXA9-203ENST00000465941 CHMP3Q9Y3E7 222 aa23.07■■□□□ 1.28
HOXA9-203ENST00000465941 COL4A1P02462 1669 aa23.06■■□□□ 1.28
HOXA9-203ENST00000465941 FKBP4Q02790 459 aaKnown RBP eCLIP23.06■■□□□ 1.28
HOXA9-203ENST00000465941 SLC51AQ86UW1 340 aa23.06■■□□□ 1.28
HOXA9-203ENST00000465941 PSMD1Q99460 953 aa23.06■■□□□ 1.28
HOXA9-203ENST00000465941 LRRFIP2Q9Y608 721 aaKnown RBP23.06■■□□□ 1.28
HOXA9-203ENST00000465941 UTRNP46939 3433 aa23.05■■□□□ 1.28
HOXA9-203ENST00000465941 TAF1P21675 1872 aa23.05■■□□□ 1.28
HOXA9-203ENST00000465941 IGHMBP2P38935 993 aaKnown RBP23.05■■□□□ 1.28
HOXA9-203ENST00000465941 RASSF7Q02833 373 aa23.05■■□□□ 1.28
HOXA9-203ENST00000465941 GNAI2P04899 355 aa23.04■■□□□ 1.28
HOXA9-203ENST00000465941 LMNB1P20700 586 aa23.04■■□□□ 1.28
HOXA9-203ENST00000465941 MVPQ14764 893 aaKnown RBP23.04■■□□□ 1.28
HOXA9-203ENST00000465941 MPNDQ8N594 471 aa23.04■■□□□ 1.28
HOXA9-203ENST00000465941 MPHOSPH8Q99549 860 aa23.04■■□□□ 1.28
HOXA9-203ENST00000465941 RTFDC1Q9BY42 306 aaPredicted RBP23.04■■□□□ 1.28
HOXA9-203ENST00000465941 PRELPP51888 382 aa23.03■■□□□ 1.28
HOXA9-203ENST00000465941 DPP8Q6V1X1 898 aaPredicted RBP23.03■■□□□ 1.28
HOXA9-203ENST00000465941 FER1L6Q2WGJ9 1857 aa23.02■■□□□ 1.28
HOXA9-203ENST00000465941 RRP1P56182 461 aaKnown RBP23.02■■□□□ 1.28
HOXA9-203ENST00000465941 C20orf194Q5TEA3 1177 aa23.02■■□□□ 1.28
HOXA9-203ENST00000465941 PODXL2Q9NZ53 605 aa23.02■■□□□ 1.28
HOXA9-203ENST00000465941 MINPP1Q9UNW1 487 aa23.02■■□□□ 1.28
HOXA9-203ENST00000465941 NSFL1CQ9UNZ2 370 aaKnown RBP23.02■■□□□ 1.28
HOXA9-203ENST00000465941 COG6Q9Y2V7 657 aa23.02■■□□□ 1.28
HOXA9-203ENST00000465941 GPSM2P81274 684 aa23.01■■□□□ 1.27
HOXA9-203ENST00000465941 TAF7LQ5H9L4 462 aa23.01■■□□□ 1.27
HOXA9-203ENST00000465941 C9orf131Q5VYM1 1079 aa23.01■■□□□ 1.27
HOXA9-203ENST00000465941 SUPT20HQ8NEM7 779 aa23.01■■□□□ 1.27
HOXA9-203ENST00000465941 VPS33BQ9H267 617 aa23.01■■□□□ 1.27
HOXA9-203ENST00000465941 DDX19BQ9UMR2 479 aa23.01■■□□□ 1.27
HOXA9-203ENST00000465941 LRRC37AA6NMS7 1700 aa23■■□□□ 1.27
HOXA9-203ENST00000465941 MTX1Q13505 466 aa23■■□□□ 1.27
HOXA9-203ENST00000465941 ZNF594Q96JF6 807 aaPredicted RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms