RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 RGL4Q8IZJ4 473 aa11.28□□□□□ -0.6
SSB-207ENST00000465871 JPH1Q9HDC5 661 aaPredicted RBP11.28□□□□□ -0.6
SSB-207ENST00000465871 EGFRP00533 1210 aa11.27□□□□□ -0.61
SSB-207ENST00000465871 TARSP26639 723 aaKnown RBP11.27□□□□□ -0.61
SSB-207ENST00000465871 BAG6P46379 1132 aa11.27□□□□□ -0.61
SSB-207ENST00000465871 PSAPL1Q6NUJ1 521 aa11.27□□□□□ -0.61
SSB-207ENST00000465871 DHX32Q7L7V1 743 aaKnown RBP11.27□□□□□ -0.61
SSB-207ENST00000465871 ETFBKMTQ8IXQ9 262 aa11.27□□□□□ -0.61
SSB-207ENST00000465871 USP20Q9Y2K6 914 aa11.27□□□□□ -0.61
SSB-207ENST00000465871 SASH3O75995 380 aa11.26□□□□□ -0.61
SSB-207ENST00000465871 CAPN12Q6ZSI9 719 aa11.26□□□□□ -0.61
SSB-207ENST00000465871 CCDC82Q8N4S0 544 aa11.26□□□□□ -0.61
SSB-207ENST00000465871 NUDT8Q8WV74 236 aa11.26□□□□□ -0.61
SSB-207ENST00000465871 FAM229AH3BQW9 127 aa11.25□□□□□ -0.61
SSB-207ENST00000465871 TNFRSF10BO14763 440 aa11.25□□□□□ -0.61
SSB-207ENST00000465871 XYLBO75191 536 aa11.25□□□□□ -0.61
SSB-207ENST00000465871 FAM35AQ86V20 835 aa11.25□□□□□ -0.61
SSB-207ENST00000465871 CMTR1Q8N1G2 835 aaKnown RBP11.25□□□□□ -0.61
SSB-207ENST00000465871 TRPM4Q8TD43 1214 aa11.25□□□□□ -0.61
SSB-207ENST00000465871 SLAIN2Q9P270 581 aa11.25□□□□□ -0.61
SSB-207ENST00000465871 GPLD1P80108 840 aa11.24□□□□□ -0.61
SSB-207ENST00000465871 TRIM28Q13263 835 aaKnown RBP11.24□□□□□ -0.61
SSB-207ENST00000465871 KCNMB2Q9Y691 235 aa11.24□□□□□ -0.61
SSB-207ENST00000465871 ADAM23O75077 832 aa11.23□□□□□ -0.61
SSB-207ENST00000465871 RGS9O75916 674 aaPredicted RBP11.23□□□□□ -0.61
SSB-207ENST00000465871 APBA3O96018 575 aa11.23□□□□□ -0.61
SSB-207ENST00000465871 ATP2B4P23634 1241 aa11.23□□□□□ -0.61
SSB-207ENST00000465871 ARID4AP29374 1257 aaPredicted RBP11.23□□□□□ -0.61
SSB-207ENST00000465871 AFF1P51825 1210 aaKnown RBP11.23□□□□□ -0.61
SSB-207ENST00000465871 NAA30Q147X3 362 aaPredicted RBP11.23□□□□□ -0.61
SSB-207ENST00000465871 FAM26DQ5JW98 314 aa11.23□□□□□ -0.61
SSB-207ENST00000465871 FRRS1LQ9P0K9 344 aa11.23□□□□□ -0.61
SSB-207ENST00000465871 ZBTB42B2RXF5 422 aa11.22□□□□□ -0.61
SSB-207ENST00000465871 CPB1P15086 417 aa11.22□□□□□ -0.61
SSB-207ENST00000465871 TRAPPC3LQ5T215 181 aa11.22□□□□□ -0.61
SSB-207ENST00000465871 NRLP54845 237 aa11.21□□□□□ -0.61
SSB-207ENST00000465871 LPIN3Q9BQK8 851 aa11.21□□□□□ -0.61
SSB-207ENST00000465871 MLLT1Q03111 559 aaPredicted RBP11.2□□□□□ -0.62
SSB-207ENST00000465871 PERM1Q5SV97 790 aa11.2□□□□□ -0.62
SSB-207ENST00000465871 NACC1Q96RE7 527 aa11.2□□□□□ -0.62
SSB-207ENST00000465871 C1orf115Q9H7X2 142 aa11.2□□□□□ -0.62
SSB-207ENST00000465871 FAM13BQ9NYF5 915 aa11.2□□□□□ -0.62
SSB-207ENST00000465871 TLR7Q9NYK1 1049 aaKnown RBP11.2□□□□□ -0.62
SSB-207ENST00000465871 A0A0A0MRY4 1105 aa11.19□□□□□ -0.62
SSB-207ENST00000465871 TRIP4Q15650 581 aaPredicted RBP11.19□□□□□ -0.62
SSB-207ENST00000465871 C14orf37Q86TY3 774 aa11.19□□□□□ -0.62
SSB-207ENST00000465871 STIM2Q9P246 746 aa11.19□□□□□ -0.62
SSB-207ENST00000465871 K7ELQ4 463 aaPredicted RBP11.18□□□□□ -0.62
SSB-207ENST00000465871 PPP1R15AO75807 674 aaPredicted RBP11.18□□□□□ -0.62
SSB-207ENST00000465871 PSAPP07602 524 aa11.18□□□□□ -0.62
SSB-207ENST00000465871 GATA4P43694 442 aa11.18□□□□□ -0.62
SSB-207ENST00000465871 RAC1P63000 192 aa11.18□□□□□ -0.62
SSB-207ENST00000465871 ELMSAN1Q6PJG2 1045 aa11.18□□□□□ -0.62
SSB-207ENST00000465871 LOC100996750A0A140TA64 210 aa11.17□□□□□ -0.62
SSB-207ENST00000465871 MMP20O60882 483 aa11.17□□□□□ -0.62
SSB-207ENST00000465871 HOXD8P13378 290 aaPredicted RBP11.17□□□□□ -0.62
SSB-207ENST00000465871 SOX18P35713 384 aa11.17□□□□□ -0.62
SSB-207ENST00000465871 ZAP70P43403 619 aa11.17□□□□□ -0.62
SSB-207ENST00000465871 PLAURQ03405 335 aa11.17□□□□□ -0.62
SSB-207ENST00000465871 GRIK4Q16099 956 aa11.17□□□□□ -0.62
SSB-207ENST00000465871 ABTB2Q8N961 1025 aa11.17□□□□□ -0.62
SSB-207ENST00000465871 PIK3R5Q8WYR1 880 aa11.17□□□□□ -0.62
SSB-207ENST00000465871 KRTAP4-6Q9BYQ5 205 aa11.17□□□□□ -0.62
SSB-207ENST00000465871 FURINP09958 794 aa11.16□□□□□ -0.62
SSB-207ENST00000465871 ELNP15502 786 aa11.16□□□□□ -0.62
SSB-207ENST00000465871 GRIK5Q16478 980 aa11.16□□□□□ -0.62
SSB-207ENST00000465871 NLRP13Q86W25 1043 aa11.16□□□□□ -0.62
SSB-207ENST00000465871 TTC9Q92623 222 aa11.16□□□□□ -0.62
SSB-207ENST00000465871 SEPT3Q9UH03 358 aa11.16□□□□□ -0.62
SSB-207ENST00000465871 EIF2AK2P19525 551 aaKnown RBP11.15□□□□□ -0.62
SSB-207ENST00000465871 MSL1Q68DK7 614 aa11.15□□□□□ -0.62
SSB-207ENST00000465871 HFE2Q6ZVN8 426 aa11.15□□□□□ -0.62
SSB-207ENST00000465871 ILDR2Q71H61 639 aa11.15□□□□□ -0.62
SSB-207ENST00000465871 TMEM88BA6NKF7 163 aa11.14□□□□□ -0.63
SSB-207ENST00000465871 UBAP1LF5GYI3 381 aa11.14□□□□□ -0.63
SSB-207ENST00000465871 FMR1NBQ8N0W7 255 aaPredicted RBP11.14□□□□□ -0.63
SSB-207ENST00000465871 SMG9Q9H0W8 520 aaKnown RBP11.14□□□□□ -0.63
SSB-207ENST00000465871 DMRTC2Q8IXT2 367 aaPredicted RBP11.13□□□□□ -0.63
SSB-207ENST00000465871 NSUN5Q96P11 429 aaKnown RBP11.13□□□□□ -0.63
SSB-207ENST00000465871 C9orf172C9J069 976 aa11.12□□□□□ -0.63
SSB-207ENST00000465871 ZBTB39O15060 712 aa11.12□□□□□ -0.63
SSB-207ENST00000465871 DOC2BQ14184 412 aa11.12□□□□□ -0.63
SSB-207ENST00000465871 DTWD1Q8N5C7 304 aa11.12□□□□□ -0.63
SSB-207ENST00000465871 GPR152Q8TDT2 470 aa11.12□□□□□ -0.63
SSB-207ENST00000465871 FNDC3AQ9Y2H6 1198 aaKnown RBP11.12□□□□□ -0.63
SSB-207ENST00000465871 LOC102724428A0A0B4J2F2 783 aa11.11□□□□□ -0.63
SSB-207ENST00000465871 SELPP16109 830 aa11.11□□□□□ -0.63
SSB-207ENST00000465871 SIK1P57059 783 aa11.11□□□□□ -0.63
SSB-207ENST00000465871 WFDC8Q8IUA0 241 aa11.11□□□□□ -0.63
SSB-207ENST00000465871 HELQQ8TDG4 1101 aa11.11□□□□□ -0.63
SSB-207ENST00000465871 J3QW42 95 aa11.1□□□□□ -0.63
SSB-207ENST00000465871 GHRHP01286 108 aa11.1□□□□□ -0.63
SSB-207ENST00000465871 OR13H1Q8NG92 308 aa11.1□□□□□ -0.63
SSB-207ENST00000465871 PLD4Q96BZ4 506 aa11.1□□□□□ -0.63
SSB-207ENST00000465871 RBSNQ9H1K0 784 aa11.1□□□□□ -0.63
SSB-207ENST00000465871 ADGRE1Q14246 886 aa11.09□□□□□ -0.63
SSB-207ENST00000465871 LENG1Q96BZ8 264 aaPredicted RBP11.09□□□□□ -0.63
SSB-207ENST00000465871 SSFA2P28290 1259 aa11.08□□□□□ -0.64
SSB-207ENST00000465871 NRG1Q02297 640 aaPredicted RBP11.08□□□□□ -0.64
SSB-207ENST00000465871 MBTPS1Q14703 1052 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms