RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 COPS6Q7L5N1 327 aa13.59□□□□□ -0.23
GPNMB-206ENST00000465673 NLRP10Q86W26 655 aa13.59□□□□□ -0.23
GPNMB-206ENST00000465673 SP8Q8IXZ3 490 aa13.59□□□□□ -0.23
GPNMB-206ENST00000465673 MPNDQ8N594 471 aa13.59□□□□□ -0.23
GPNMB-206ENST00000465673 XAGE3Q8WTP9 111 aa13.59□□□□□ -0.23
GPNMB-206ENST00000465673 ZIC5Q96T25 663 aa13.59□□□□□ -0.23
GPNMB-206ENST00000465673 TMX4Q9H1E5 349 aaPredicted RBP13.59□□□□□ -0.23
GPNMB-206ENST00000465673 ERBB4Q15303 1308 aa13.59□□□□□ -0.23
GPNMB-206ENST00000465673 MAPK8IP3Q9UPT6 1336 aa13.59□□□□□ -0.23
GPNMB-206ENST00000465673 TRPM7Q96QT4 1865 aa13.59□□□□□ -0.23
GPNMB-206ENST00000465673 BBOX1O75936 387 aa13.58□□□□□ -0.24
GPNMB-206ENST00000465673 RIPK4P57078 832 aa13.58□□□□□ -0.24
GPNMB-206ENST00000465673 KIAA2012Q0VF49 1180 aa13.58□□□□□ -0.24
GPNMB-206ENST00000465673 BCL2L13Q9BXK5 485 aa13.58□□□□□ -0.24
GPNMB-206ENST00000465673 ZBTB12Q9Y330 459 aaPredicted RBP13.58□□□□□ -0.24
GPNMB-206ENST00000465673 TAF1P21675 1872 aa13.58□□□□□ -0.24
GPNMB-206ENST00000465673 MAP2K2P36507 400 aa13.57□□□□□ -0.24
GPNMB-206ENST00000465673 USP48Q86UV5 1035 aa13.57□□□□□ -0.24
GPNMB-206ENST00000465673 SUPT20HQ8NEM7 779 aa13.57□□□□□ -0.24
GPNMB-206ENST00000465673 VPS33BQ9H267 617 aa13.57□□□□□ -0.24
GPNMB-206ENST00000465673 PGAP2Q9UHJ9 254 aa13.57□□□□□ -0.24
GPNMB-206ENST00000465673 TRMT112Q9UI30 125 aaKnown RBP13.57□□□□□ -0.24
GPNMB-206ENST00000465673 CNOT7Q9UIV1 285 aaKnown RBP13.57□□□□□ -0.24
GPNMB-206ENST00000465673 LAMB2P55268 1798 aa13.56□□□□□ -0.24
GPNMB-206ENST00000465673 DDX46Q7L014 1031 aaKnown RBP13.56□□□□□ -0.24
GPNMB-206ENST00000465673 EGFRP00533 1210 aa13.55□□□□□ -0.24
GPNMB-206ENST00000465673 TCIRG1Q13488 830 aa13.55□□□□□ -0.24
GPNMB-206ENST00000465673 GRAPQ13588 217 aa13.55□□□□□ -0.24
GPNMB-206ENST00000465673 SAMD7Q7Z3H4 446 aa13.55□□□□□ -0.24
GPNMB-206ENST00000465673 MICALL2Q8IY33 904 aa13.55□□□□□ -0.24
GPNMB-206ENST00000465673 GRAPLQ8TC17 118 aaPredicted RBP13.55□□□□□ -0.24
GPNMB-206ENST00000465673 CFAP44Q96MT7 982 aa13.55□□□□□ -0.24
GPNMB-206ENST00000465673 MCOLN1Q9GZU1 580 aa13.55□□□□□ -0.24
GPNMB-206ENST00000465673 KCNQ5Q9NR82 932 aa13.55□□□□□ -0.24
GPNMB-206ENST00000465673 CASP8AP2Q9UKL3 1982 aa13.54□□□□□ -0.24
GPNMB-206ENST00000465673 DUOX1Q9NRD9 1551 aa13.54□□□□□ -0.24
GPNMB-206ENST00000465673 COL4A1P02462 1669 aa13.54□□□□□ -0.24
GPNMB-206ENST00000465673 RIMBP2O15034 1052 aa13.54□□□□□ -0.24
GPNMB-206ENST00000465673 TMPOP42166 694 aaKnown RBP13.54□□□□□ -0.24
GPNMB-206ENST00000465673 MLLT1Q03111 559 aaPredicted RBP13.54□□□□□ -0.24
GPNMB-206ENST00000465673 TNIP1Q15025 636 aa13.54□□□□□ -0.24
GPNMB-206ENST00000465673 NEUROD2Q15784 382 aa13.54□□□□□ -0.24
GPNMB-206ENST00000465673 RTL5Q5HYW3 569 aaPredicted RBP13.54□□□□□ -0.24
GPNMB-206ENST00000465673 CDC37L1Q7L3B6 337 aa13.54□□□□□ -0.24
GPNMB-206ENST00000465673 CELF1Q92879 486 aaKnown RBP13.54□□□□□ -0.24
GPNMB-206ENST00000465673 DBNDD1Q9H9R9 158 aa13.54□□□□□ -0.24
GPNMB-206ENST00000465673 SH3TC1Q8TE82 1336 aa13.54□□□□□ -0.24
GPNMB-206ENST00000465673 ATP5J2-PTCD1G3V325 749 aa13.53□□□□□ -0.24
GPNMB-206ENST00000465673 PSMD14O00487 310 aa13.53□□□□□ -0.24
GPNMB-206ENST00000465673 TBC1D10BQ4KMP7 808 aaPredicted RBP13.53□□□□□ -0.24
GPNMB-206ENST00000465673 HSP90AB3PQ58FF7 597 aa13.53□□□□□ -0.24
GPNMB-206ENST00000465673 RBM26Q5T8P6 1007 aaKnown RBP13.53□□□□□ -0.24
GPNMB-206ENST00000465673 CCDC146Q8IYE0 955 aa13.53□□□□□ -0.24
GPNMB-206ENST00000465673 ZC3H15Q8WU90 426 aaKnown RBP13.53□□□□□ -0.24
GPNMB-206ENST00000465673 FAM89AQ96GI7 184 aa13.53□□□□□ -0.24
GPNMB-206ENST00000465673 PNNQ9H307 717 aaKnown RBP13.53□□□□□ -0.24
GPNMB-206ENST00000465673 CHPF2Q9P2E5 772 aa13.53□□□□□ -0.24
GPNMB-206ENST00000465673 NSFL1CQ9UNZ2 370 aaKnown RBP13.53□□□□□ -0.24
GPNMB-206ENST00000465673 LAS1LQ9Y4W2 734 aaKnown RBP13.53□□□□□ -0.24
GPNMB-206ENST00000465673 ADM5C9JUS6 153 aa13.52□□□□□ -0.25
GPNMB-206ENST00000465673 H7C1D1 291 aa13.52□□□□□ -0.25
GPNMB-206ENST00000465673 SLC34A2O95436 690 aa13.52□□□□□ -0.25
GPNMB-206ENST00000465673 RGS19P49795 217 aa13.52□□□□□ -0.25
GPNMB-206ENST00000465673 BRPF1P55201 1214 aaPredicted RBP13.52□□□□□ -0.25
GPNMB-206ENST00000465673 HUNKP57058 714 aa13.52□□□□□ -0.25
GPNMB-206ENST00000465673 GPSM2P81274 684 aa13.52□□□□□ -0.25
GPNMB-206ENST00000465673 DOK7Q18PE1 504 aa13.52□□□□□ -0.25
GPNMB-206ENST00000465673 HHIPL1Q96JK4 782 aa13.52□□□□□ -0.25
GPNMB-206ENST00000465673 POLLQ9UGP5 575 aa13.52□□□□□ -0.25
GPNMB-206ENST00000465673 CDHR2Q9BYE9 1310 aa13.52□□□□□ -0.25
GPNMB-206ENST00000465673 ANKRD36CQ5JPF3 1778 aa13.52□□□□□ -0.25
GPNMB-206ENST00000465673 C6orf229H3BNL8 230 aa13.51□□□□□ -0.25
GPNMB-206ENST00000465673 DGKZQ13574 1117 aa13.51□□□□□ -0.25
GPNMB-206ENST00000465673 WASHC4Q2M389 1173 aa13.51□□□□□ -0.25
GPNMB-206ENST00000465673 ASTN2O75129 1339 aaPredicted RBP13.5□□□□□ -0.25
GPNMB-206ENST00000465673 KRT26Q7Z3Y9 468 aa13.5□□□□□ -0.25
GPNMB-206ENST00000465673 ISCA1Q9BUE6 129 aa13.5□□□□□ -0.25
GPNMB-206ENST00000465673 BABAM1Q9NWV8 329 aa13.5□□□□□ -0.25
GPNMB-206ENST00000465673 RTL9Q8NET4 1388 aa13.49□□□□□ -0.25
GPNMB-206ENST00000465673 FAM155AB1AL88 458 aaPredicted RBP13.49□□□□□ -0.25
GPNMB-206ENST00000465673 CHL1O00533 1208 aa13.49□□□□□ -0.25
GPNMB-206ENST00000465673 CA12O43570 354 aa13.49□□□□□ -0.25
GPNMB-206ENST00000465673 ECE2O60344 883 aa13.49□□□□□ -0.25
GPNMB-206ENST00000465673 NOGQ13253 232 aa13.49□□□□□ -0.25
GPNMB-206ENST00000465673 ANKRD13DQ6ZTN6 518 aa13.49□□□□□ -0.25
GPNMB-206ENST00000465673 PLBD2Q8NHP8 589 aa13.49□□□□□ -0.25
GPNMB-206ENST00000465673 DPF2Q92785 391 aa13.49□□□□□ -0.25
GPNMB-206ENST00000465673 TRIM35Q9UPQ4 493 aa13.49□□□□□ -0.25
GPNMB-206ENST00000465673 DDX60Q8IY21 1712 aaKnown RBP13.48□□□□□ -0.25
GPNMB-206ENST00000465673 KIF23Q02241 960 aaPredicted RBP13.48□□□□□ -0.25
GPNMB-206ENST00000465673 SF3B3Q15393 1217 aaKnown RBP13.48□□□□□ -0.25
GPNMB-206ENST00000465673 HDGFL1Q5TGJ6 251 aa13.48□□□□□ -0.25
GPNMB-206ENST00000465673 RGMBQ6NW40 437 aa13.48□□□□□ -0.25
GPNMB-206ENST00000465673 GBA2Q9HCG7 927 aaPredicted RBP13.48□□□□□ -0.25
GPNMB-206ENST00000465673 POLR2AP24928 1970 aaKnown RBP13.48□□□□□ -0.25
GPNMB-206ENST00000465673 LRRC37AA6NMS7 1700 aa13.47□□□□□ -0.25
GPNMB-206ENST00000465673 LMOD3Q0VAK6 560 aa13.47□□□□□ -0.25
GPNMB-206ENST00000465673 TMC4Q7Z404 712 aa13.47□□□□□ -0.25
GPNMB-206ENST00000465673 TBC1D16Q8TBP0 767 aa13.47□□□□□ -0.25
GPNMB-206ENST00000465673 JARID2Q92833 1246 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms