RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 ELNP15502 786 aa6.15□□□□□ -1.42
SNX4-202ENST00000465505 FAM69CQ0P6D2 419 aa6.15□□□□□ -1.42
SNX4-202ENST00000465505 FKBP5Q13451 457 aaPredicted RBP6.15□□□□□ -1.42
SNX4-202ENST00000465505 GRIK5Q16478 980 aa6.15□□□□□ -1.42
SNX4-202ENST00000465505 PCSK7Q16549 785 aa6.15□□□□□ -1.42
SNX4-202ENST00000465505 COX20Q5RI15 118 aa6.15□□□□□ -1.42
SNX4-202ENST00000465505 DHX32Q7L7V1 743 aaKnown RBP6.15□□□□□ -1.42
SNX4-202ENST00000465505 KRT25Q7Z3Z0 450 aa6.15□□□□□ -1.42
SNX4-202ENST00000465505 PRIMPOLQ96LW4 560 aa6.15□□□□□ -1.42
SNX4-202ENST00000465505 RTCBQ9Y3I0 505 aaKnown RBP6.15□□□□□ -1.42
SNX4-202ENST00000465505 EGFRP00533 1210 aa6.14□□□□□ -1.43
SNX4-202ENST00000465505 CPB1P15086 417 aa6.14□□□□□ -1.43
SNX4-202ENST00000465505 ELOAQ14241 798 aaKnown RBP6.14□□□□□ -1.43
SNX4-202ENST00000465505 ADGRE1Q14246 886 aa6.14□□□□□ -1.43
SNX4-202ENST00000465505 SWI5Q1ZZU3 235 aa6.14□□□□□ -1.43
SNX4-202ENST00000465505 FAM35AQ86V20 835 aa6.14□□□□□ -1.43
SNX4-202ENST00000465505 DMRTC2Q8IXT2 367 aaPredicted RBP6.14□□□□□ -1.43
SNX4-202ENST00000465505 Q8N3U1 123 aa6.14□□□□□ -1.43
SNX4-202ENST00000465505 LENG1Q96BZ8 264 aaPredicted RBP6.14□□□□□ -1.43
SNX4-202ENST00000465505 LPIN3Q9BQK8 851 aa6.14□□□□□ -1.43
SNX4-202ENST00000465505 FRRS1LQ9P0K9 344 aa6.14□□□□□ -1.43
SNX4-202ENST00000465505 ZMIZ1Q9ULJ6 1067 aa6.14□□□□□ -1.43
SNX4-202ENST00000465505 USP20Q9Y2K6 914 aa6.14□□□□□ -1.43
SNX4-202ENST00000465505 ACIN1Q9UKV3 1341 aaKnown RBP6.14□□□□□ -1.43
SNX4-202ENST00000465505 RAC1P63000 192 aa6.13□□□□□ -1.43
SNX4-202ENST00000465505 PLAURQ03405 335 aa6.13□□□□□ -1.43
SNX4-202ENST00000465505 OCLNQ16625 522 aa6.13□□□□□ -1.43
SNX4-202ENST00000465505 PERM1Q5SV97 790 aa6.13□□□□□ -1.43
SNX4-202ENST00000465505 MSL1Q68DK7 614 aa6.13□□□□□ -1.43
SNX4-202ENST00000465505 SHISA2Q6UWI4 295 aa6.13□□□□□ -1.43
SNX4-202ENST00000465505 TREML1Q86YW5 311 aa6.13□□□□□ -1.43
SNX4-202ENST00000465505 FMR1NBQ8N0W7 255 aaPredicted RBP6.13□□□□□ -1.43
SNX4-202ENST00000465505 TTC9Q92623 222 aa6.13□□□□□ -1.43
SNX4-202ENST00000465505 PRMT3O60678 531 aa6.12□□□□□ -1.43
SNX4-202ENST00000465505 RARAP10276 462 aa6.12□□□□□ -1.43
SNX4-202ENST00000465505 GPLD1P80108 840 aa6.12□□□□□ -1.43
SNX4-202ENST00000465505 MBTPS1Q14703 1052 aa6.12□□□□□ -1.43
SNX4-202ENST00000465505 SAP130Q9H0E3 1048 aa6.12□□□□□ -1.43
SNX4-202ENST00000465505 TLR7Q9NYK1 1049 aaKnown RBP6.12□□□□□ -1.43
SNX4-202ENST00000465505 DYRK3O43781 588 aa6.11□□□□□ -1.43
SNX4-202ENST00000465505 XYLBO75191 536 aa6.11□□□□□ -1.43
SNX4-202ENST00000465505 NRLP54845 237 aa6.11□□□□□ -1.43
SNX4-202ENST00000465505 NRG1Q02297 640 aaPredicted RBP6.11□□□□□ -1.43
SNX4-202ENST00000465505 MLLT1Q03111 559 aaPredicted RBP6.11□□□□□ -1.43
SNX4-202ENST00000465505 ELMSAN1Q6PJG2 1045 aa6.11□□□□□ -1.43
SNX4-202ENST00000465505 RGL4Q8IZJ4 473 aa6.11□□□□□ -1.43
SNX4-202ENST00000465505 CMTR1Q8N1G2 835 aaKnown RBP6.11□□□□□ -1.43
SNX4-202ENST00000465505 STK32AQ8WU08 396 aa6.11□□□□□ -1.43
SNX4-202ENST00000465505 KCNMB2Q9Y691 235 aa6.11□□□□□ -1.43
SNX4-202ENST00000465505 FAM26DQ5JW98 314 aa6.1□□□□□ -1.43
SNX4-202ENST00000465505 CAPN12Q6ZSI9 719 aa6.1□□□□□ -1.43
SNX4-202ENST00000465505 HFE2Q6ZVN8 426 aa6.1□□□□□ -1.43
SNX4-202ENST00000465505 TXNRD3Q86VQ6 643 aa6.1□□□□□ -1.43
SNX4-202ENST00000465505 FBXO11Q86XK2 927 aa6.1□□□□□ -1.43
SNX4-202ENST00000465505 ETFBKMTQ8IXQ9 262 aa6.1□□□□□ -1.43
SNX4-202ENST00000465505 DTWD1Q8N5C7 304 aa6.1□□□□□ -1.43
SNX4-202ENST00000465505 COL26A1Q96A83 441 aa6.1□□□□□ -1.43
SNX4-202ENST00000465505 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.09□□□□□ -1.43
SNX4-202ENST00000465505 LOC102724428A0A0B4J2F2 783 aa6.09□□□□□ -1.43
SNX4-202ENST00000465505 J3QW42 95 aa6.09□□□□□ -1.43
SNX4-202ENST00000465505 MMP20O60882 483 aa6.09□□□□□ -1.43
SNX4-202ENST00000465505 ATG7O95352 703 aa6.09□□□□□ -1.43
SNX4-202ENST00000465505 BRD2P25440 801 aaKnown RBP6.09□□□□□ -1.43
SNX4-202ENST00000465505 SIK1P57059 783 aa6.09□□□□□ -1.43
SNX4-202ENST00000465505 FOXD4L6Q3SYB3 417 aaPredicted RBP6.09□□□□□ -1.43
SNX4-202ENST00000465505 ZMYM1Q5SVZ6 1142 aa6.09□□□□□ -1.43
SNX4-202ENST00000465505 C16orf46Q6P387 395 aa6.09□□□□□ -1.43
SNX4-202ENST00000465505 FOXD4L3Q6VB84 417 aaPredicted RBP6.09□□□□□ -1.43
SNX4-202ENST00000465505 SMG9Q9H0W8 520 aaKnown RBP6.09□□□□□ -1.43
SNX4-202ENST00000465505 H2AFB1P0C5Y9 115 aa6.08□□□□□ -1.44
SNX4-202ENST00000465505 H2AFB2P0C5Z0 115 aa6.08□□□□□ -1.44
SNX4-202ENST00000465505 ARID4AP29374 1257 aaPredicted RBP6.08□□□□□ -1.44
SNX4-202ENST00000465505 WFDC8Q8IUA0 241 aa6.08□□□□□ -1.44
SNX4-202ENST00000465505 SSBP4Q9BWG4 385 aaPredicted RBP6.08□□□□□ -1.44
SNX4-202ENST00000465505 CXXC1Q9P0U4 656 aaPredicted RBP6.08□□□□□ -1.44
SNX4-202ENST00000465505 TNFRSF10BO14763 440 aa6.07□□□□□ -1.44
SNX4-202ENST00000465505 DEAF1O75398 565 aaPredicted RBP6.07□□□□□ -1.44
SNX4-202ENST00000465505 PSAPP07602 524 aa6.07□□□□□ -1.44
SNX4-202ENST00000465505 HOXD8P13378 290 aaPredicted RBP6.07□□□□□ -1.44
SNX4-202ENST00000465505 SOX18P35713 384 aa6.07□□□□□ -1.44
SNX4-202ENST00000465505 PRSS36Q5K4E3 855 aa6.07□□□□□ -1.44
SNX4-202ENST00000465505 TMEM164Q5U3C3 297 aa6.07□□□□□ -1.44
SNX4-202ENST00000465505 ZMYND15Q9H091 742 aa6.07□□□□□ -1.44
SNX4-202ENST00000465505 USP21Q9UK80 565 aa6.07□□□□□ -1.44
SNX4-202ENST00000465505 EIF2AK2P19525 551 aaKnown RBP6.06□□□□□ -1.44
SNX4-202ENST00000465505 NAA30Q147X3 362 aaPredicted RBP6.06□□□□□ -1.44
SNX4-202ENST00000465505 TRIP4Q15650 581 aaPredicted RBP6.06□□□□□ -1.44
SNX4-202ENST00000465505 IGF2-ASQ6U949 168 aa6.06□□□□□ -1.44
SNX4-202ENST00000465505 NLRP13Q86W25 1043 aa6.06□□□□□ -1.44
SNX4-202ENST00000465505 WFDC12Q8WWY7 111 aa6.06□□□□□ -1.44
SNX4-202ENST00000465505 CLP1Q92989 425 aaKnown RBP6.06□□□□□ -1.44
SNX4-202ENST00000465505 PLD4Q96BZ4 506 aa6.06□□□□□ -1.44
SNX4-202ENST00000465505 MKNK1Q9BUB5 465 aa6.06□□□□□ -1.44
SNX4-202ENST00000465505 DLL1O00548 723 aa6.05□□□□□ -1.44
SNX4-202ENST00000465505 PTCD1O75127 700 aaKnown RBP6.05□□□□□ -1.44
SNX4-202ENST00000465505 TP53INP1Q96A56 240 aa6.05□□□□□ -1.44
SNX4-202ENST00000465505 NSUN5Q96P11 429 aaKnown RBP6.05□□□□□ -1.44
SNX4-202ENST00000465505 SLAIN2Q9P270 581 aa6.05□□□□□ -1.44
SNX4-202ENST00000465505 ZBTB39O15060 712 aa6.04□□□□□ -1.44
SNX4-202ENST00000465505 NOS3P29474 1203 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms