RNA–Protein interactions for RNA: ENST00000465409.1

CUEDC2-202, Transcript of CUE domain containing 2, humanhuman

TSL 2

Gene CUEDC2, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2-202ENST00000465409 TNRC6CQ9HCJ0 1690 aaKnown RBP16.61■□□□□ 0.25
CUEDC2-202ENST00000465409 UTYO14607 1347 aa16.61■□□□□ 0.25
CUEDC2-202ENST00000465409 ZC3H4Q9UPT8 1303 aaKnown RBP16.61■□□□□ 0.25
CUEDC2-202ENST00000465409 RTL9Q8NET4 1388 aa16.61■□□□□ 0.25
CUEDC2-202ENST00000465409 SLX4Q8IY92 1834 aa16.61■□□□□ 0.25
CUEDC2-202ENST00000465409 CSF1RP07333 972 aa16.6■□□□□ 0.25
CUEDC2-202ENST00000465409 LMNB1P20700 586 aa16.6■□□□□ 0.25
CUEDC2-202ENST00000465409 RTL5Q5HYW3 569 aaPredicted RBP16.6■□□□□ 0.25
CUEDC2-202ENST00000465409 UBE3BQ7Z3V4 1068 aa16.6■□□□□ 0.25
CUEDC2-202ENST00000465409 TTLL11Q8NHH1 800 aa16.6■□□□□ 0.25
CUEDC2-202ENST00000465409 PSMD1Q99460 953 aa16.6■□□□□ 0.25
CUEDC2-202ENST00000465409 BCL2L13Q9BXK5 485 aa16.6■□□□□ 0.25
CUEDC2-202ENST00000465409 C9orf78Q9NZ63 289 aaPredicted RBP16.6■□□□□ 0.25
CUEDC2-202ENST00000465409 ABCC4O15439 1325 aa16.6■□□□□ 0.25
CUEDC2-202ENST00000465409 PPEF1O14829 653 aaPredicted RBP16.59■□□□□ 0.25
CUEDC2-202ENST00000465409 CTSWP56202 376 aa16.59■□□□□ 0.25
CUEDC2-202ENST00000465409 RPS8P62241 208 aaKnown RBP16.59■□□□□ 0.25
CUEDC2-202ENST00000465409 TAOK3Q9H2K8 898 aa16.59■□□□□ 0.25
CUEDC2-202ENST00000465409 DDX60Q8IY21 1712 aaKnown RBP16.59■□□□□ 0.25
CUEDC2-202ENST00000465409 LAMB2P55268 1798 aa16.59■□□□□ 0.25
CUEDC2-202ENST00000465409 NFKBIEO00221 500 aa16.58■□□□□ 0.24
CUEDC2-202ENST00000465409 FKBP4Q02790 459 aaKnown RBP eCLIP16.58■□□□□ 0.24
CUEDC2-202ENST00000465409 CDC5LQ99459 802 aaKnown RBP16.58■□□□□ 0.24
CUEDC2-202ENST00000465409 ATF7IPQ6VMQ6 1270 aa16.57■□□□□ 0.24
CUEDC2-202ENST00000465409 SUPT20HQ8NEM7 779 aa16.57■□□□□ 0.24
CUEDC2-202ENST00000465409 BCAR3O75815 825 aa16.56■□□□□ 0.24
CUEDC2-202ENST00000465409 C9orf131Q5VYM1 1079 aa16.56■□□□□ 0.24
CUEDC2-202ENST00000465409 INTS3Q68E01 1043 aaKnown RBP16.56■□□□□ 0.24
CUEDC2-202ENST00000465409 RTFDC1Q9BY42 306 aaPredicted RBP16.56■□□□□ 0.24
CUEDC2-202ENST00000465409 FER1L6Q2WGJ9 1857 aa16.56■□□□□ 0.24
CUEDC2-202ENST00000465409 SNED1Q8TER0 1413 aa16.55■□□□□ 0.24
CUEDC2-202ENST00000465409 FOXO4P98177 505 aa16.55■□□□□ 0.24
CUEDC2-202ENST00000465409 ZKSCAN2Q63HK3 967 aa16.55■□□□□ 0.24
CUEDC2-202ENST00000465409 JARID2Q92833 1246 aaPredicted RBP16.55■□□□□ 0.24
CUEDC2-202ENST00000465409 USP44Q9H0E7 712 aa16.55■□□□□ 0.24
CUEDC2-202ENST00000465409 ZNF219Q9P2Y4 722 aaPredicted RBP16.55■□□□□ 0.24
CUEDC2-202ENST00000465409 MS4A1P11836 297 aa16.54■□□□□ 0.24
CUEDC2-202ENST00000465409 ANKRD18AQ8IVF6 992 aa16.54■□□□□ 0.24
CUEDC2-202ENST00000465409 MPNDQ8N594 471 aa16.54■□□□□ 0.24
CUEDC2-202ENST00000465409 CELF1Q92879 486 aaKnown RBP16.54■□□□□ 0.24
CUEDC2-202ENST00000465409 BSDC1Q9NW68 430 aaPredicted RBP16.54■□□□□ 0.24
CUEDC2-202ENST00000465409 RNF181Q9P0P0 153 aa16.54■□□□□ 0.24
CUEDC2-202ENST00000465409 NBPF7P0C2Y1 421 aaPredicted RBP16.53■□□□□ 0.24
CUEDC2-202ENST00000465409 TRIM27P14373 513 aa16.53■□□□□ 0.24
CUEDC2-202ENST00000465409 GREM2Q9H772 168 aa16.53■□□□□ 0.24
CUEDC2-202ENST00000465409 PODXL2Q9NZ53 605 aa16.53■□□□□ 0.24
CUEDC2-202ENST00000465409 SBF1O95248 1867 aa16.52■□□□□ 0.24
CUEDC2-202ENST00000465409 RASSF7Q02833 373 aa16.52■□□□□ 0.24
CUEDC2-202ENST00000465409 RABL6Q3YEC7 729 aaPredicted RBP16.52■□□□□ 0.24
CUEDC2-202ENST00000465409 DPP8Q6V1X1 898 aaPredicted RBP16.52■□□□□ 0.24
CUEDC2-202ENST00000465409 SEC31BQ9NQW1 1179 aa16.52■□□□□ 0.24
CUEDC2-202ENST00000465409 MYH3P11055 1940 aa16.51■□□□□ 0.23
CUEDC2-202ENST00000465409 ANKRD18BA2A2Z9 1011 aa16.51■□□□□ 0.23
CUEDC2-202ENST00000465409 GNAI3P08754 354 aa16.51■□□□□ 0.23
CUEDC2-202ENST00000465409 ITGA6P23229 1130 aa16.51■□□□□ 0.23
CUEDC2-202ENST00000465409 IGHMBP2P38935 993 aaKnown RBP16.51■□□□□ 0.23
CUEDC2-202ENST00000465409 IARSP41252 1262 aaKnown RBP16.51■□□□□ 0.23
CUEDC2-202ENST00000465409 IFIT5Q13325 482 aaKnown RBP16.51■□□□□ 0.23
CUEDC2-202ENST00000465409 LMBR1LQ6UX01 489 aa16.51■□□□□ 0.23
CUEDC2-202ENST00000465409 FRAT1Q92837 279 aaPredicted RBP16.51■□□□□ 0.23
CUEDC2-202ENST00000465409 PRELPP51888 382 aa16.5■□□□□ 0.23
CUEDC2-202ENST00000465409 CCDC57Q2TAC2 916 aa16.5■□□□□ 0.23
CUEDC2-202ENST00000465409 DPY19L2Q6NUT2 758 aa16.5■□□□□ 0.23
CUEDC2-202ENST00000465409 OLFM4Q6UX06 510 aa16.5■□□□□ 0.23
CUEDC2-202ENST00000465409 ZNF784Q8NCA9 323 aaPredicted RBP16.5■□□□□ 0.23
CUEDC2-202ENST00000465409 JDP2Q8WYK2 163 aa16.5■□□□□ 0.23
CUEDC2-202ENST00000465409 KAZALD1Q96I82 304 aa16.5■□□□□ 0.23
CUEDC2-202ENST00000465409 RCAN3Q9UKA8 241 aa16.5■□□□□ 0.23
CUEDC2-202ENST00000465409 CACNA1SQ13698 1873 aa16.5■□□□□ 0.23
CUEDC2-202ENST00000465409 MPHOSPH8Q99549 860 aa16.49■□□□□ 0.23
CUEDC2-202ENST00000465409 NSFL1CQ9UNZ2 370 aaKnown RBP16.49■□□□□ 0.23
CUEDC2-202ENST00000465409 KDM2BQ8NHM5 1336 aa16.48■□□□□ 0.23
CUEDC2-202ENST00000465409 UBTFL1P0CB47 393 aaPredicted RBP16.48■□□□□ 0.23
CUEDC2-202ENST00000465409 SUCLG2Q96I99 432 aa16.48■□□□□ 0.23
CUEDC2-202ENST00000465409 EYA3Q99504 573 aa16.48■□□□□ 0.23
CUEDC2-202ENST00000465409 ANKRD2Q9GZV1 360 aa16.48■□□□□ 0.23
CUEDC2-202ENST00000465409 ZNF277Q9NRM2 450 aaPredicted RBP16.48■□□□□ 0.23
CUEDC2-202ENST00000465409 MINPP1Q9UNW1 487 aa16.48■□□□□ 0.23
CUEDC2-202ENST00000465409 LRRC37AA6NMS7 1700 aa16.48■□□□□ 0.23
CUEDC2-202ENST00000465409 XDHP47989 1333 aa16.47■□□□□ 0.23
CUEDC2-202ENST00000465409 DICER1Q9UPY3 1922 aaKnown RBP16.47■□□□□ 0.23
CUEDC2-202ENST00000465409 GLTPD2A6NH11 291 aa16.47■□□□□ 0.23
CUEDC2-202ENST00000465409 FZD9O00144 591 aa16.47■□□□□ 0.23
CUEDC2-202ENST00000465409 ATP2B4P23634 1241 aa16.47■□□□□ 0.23
CUEDC2-202ENST00000465409 KIAA2012Q0VF49 1180 aa16.47■□□□□ 0.23
CUEDC2-202ENST00000465409 FAM161AQ3B820 660 aa16.47■□□□□ 0.23
CUEDC2-202ENST00000465409 EPHA10Q5JZY3 1008 aa16.47■□□□□ 0.23
CUEDC2-202ENST00000465409 DZIP1LQ8IYY4 767 aaKnown RBP16.47■□□□□ 0.23
CUEDC2-202ENST00000465409 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.47■□□□□ 0.23
CUEDC2-202ENST00000465409 CCDC85AQ96PX6 553 aaPredicted RBP16.47■□□□□ 0.23
CUEDC2-202ENST00000465409 BICC1Q9H694 974 aaKnown RBP16.47■□□□□ 0.23
CUEDC2-202ENST00000465409 LEMD3Q9Y2U8 911 aa16.47■□□□□ 0.23
CUEDC2-202ENST00000465409 GPSM2P81274 684 aa16.46■□□□□ 0.23
CUEDC2-202ENST00000465409 FTSJ3Q8IY81 847 aaKnown RBP16.46■□□□□ 0.23
CUEDC2-202ENST00000465409 LARGE2Q8N3Y3 721 aa16.46■□□□□ 0.23
CUEDC2-202ENST00000465409 ANKIB1Q9P2G1 1089 aa16.46■□□□□ 0.23
CUEDC2-202ENST00000465409 WASHC4Q2M389 1173 aa16.45■□□□□ 0.22
CUEDC2-202ENST00000465409 LDHAL6AQ6ZMR3 332 aa16.45■□□□□ 0.22
CUEDC2-202ENST00000465409 TBC1D16Q8TBP0 767 aa16.45■□□□□ 0.22
CUEDC2-202ENST00000465409 CHMP4BQ9H444 224 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms