RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 MYH3P11055 1940 aa23.28■■□□□ 1.32
SCAMP3-204ENST00000465312 NBPF7P0C2Y1 421 aaPredicted RBP23.28■■□□□ 1.32
SCAMP3-204ENST00000465312 UBTFL1P0CB47 393 aaPredicted RBP23.28■■□□□ 1.32
SCAMP3-204ENST00000465312 YBX3P16989 372 aaKnown RBP eCLIP23.28■■□□□ 1.328e-7■■■□□ 18.5
SCAMP3-204ENST00000465312 TMX4Q9H1E5 349 aaPredicted RBP23.28■■□□□ 1.32
SCAMP3-204ENST00000465312 INTS3Q68E01 1043 aaKnown RBP23.27■■□□□ 1.32
SCAMP3-204ENST00000465312 PPEF1O14829 653 aaPredicted RBP23.26■■□□□ 1.31
SCAMP3-204ENST00000465312 C21orf2O43822 256 aa23.26■■□□□ 1.31
SCAMP3-204ENST00000465312 CASP7P55210 303 aa23.26■■□□□ 1.31
SCAMP3-204ENST00000465312 SF3B3Q15393 1217 aaKnown RBP23.26■■□□□ 1.31
SCAMP3-204ENST00000465312 PANK1Q8TE04 598 aa23.26■■□□□ 1.31
SCAMP3-204ENST00000465312 SUCLG2Q96I99 432 aa23.26■■□□□ 1.31
SCAMP3-204ENST00000465312 CRAMP1Q96RY5 1269 aa23.26■■□□□ 1.31
SCAMP3-204ENST00000465312 GRIN3BO60391 1043 aa23.25■■□□□ 1.31
SCAMP3-204ENST00000465312 ARHGAP27Q6ZUM4 889 aa23.25■■□□□ 1.31
SCAMP3-204ENST00000465312 USP44Q9H0E7 712 aa23.25■■□□□ 1.31
SCAMP3-204ENST00000465312 HOXA10P31260 410 aaPredicted RBP23.24■■□□□ 1.31
SCAMP3-204ENST00000465312 GRAPQ13588 217 aa23.24■■□□□ 1.31
SCAMP3-204ENST00000465312 GRAPLQ8TC17 118 aaPredicted RBP23.24■■□□□ 1.31
SCAMP3-204ENST00000465312 PLA2G12BQ9BX93 195 aa23.24■■□□□ 1.31
SCAMP3-204ENST00000465312 SLX4Q8IY92 1834 aa23.24■■□□□ 1.31
SCAMP3-204ENST00000465312 RLBP1P12271 317 aa23.23■■□□□ 1.31
SCAMP3-204ENST00000465312 LMBR1LQ6UX01 489 aa23.23■■□□□ 1.31
SCAMP3-204ENST00000465312 TTLL11Q8NHH1 800 aa23.23■■□□□ 1.31
SCAMP3-204ENST00000465312 MEIS3Q99687 375 aa23.23■■□□□ 1.31
SCAMP3-204ENST00000465312 GREM2Q9H772 168 aa23.23■■□□□ 1.31
SCAMP3-204ENST00000465312 SEC31BQ9NQW1 1179 aa23.23■■□□□ 1.31
SCAMP3-204ENST00000465312 HDAC5Q9UQL6 1122 aa23.23■■□□□ 1.31
SCAMP3-204ENST00000465312 ARFGEF1Q9Y6D6 1849 aa23.23■■□□□ 1.31
SCAMP3-204ENST00000465312 GNAI3P08754 354 aa23.22■■□□□ 1.31
SCAMP3-204ENST00000465312 FAM161AQ3B820 660 aa23.22■■□□□ 1.31
SCAMP3-204ENST00000465312 TAF7LQ5H9L4 462 aa23.22■■□□□ 1.31
SCAMP3-204ENST00000465312 CDC5LQ99459 802 aaKnown RBP23.22■■□□□ 1.31
SCAMP3-204ENST00000465312 UTYO14607 1347 aa23.22■■□□□ 1.31
SCAMP3-204ENST00000465312 TAF1P21675 1872 aa23.22■■□□□ 1.31
SCAMP3-204ENST00000465312 EPHA10Q5JZY3 1008 aa23.21■■□□□ 1.31
SCAMP3-204ENST00000465312 SOGA3Q5TF21 947 aa23.21■■□□□ 1.31
SCAMP3-204ENST00000465312 ANKRD18AQ8IVF6 992 aa23.21■■□□□ 1.31
SCAMP3-204ENST00000465312 CELF1Q92879 486 aaKnown RBP23.21■■□□□ 1.31
SCAMP3-204ENST00000465312 BICC1Q9H694 974 aaKnown RBP23.21■■□□□ 1.31
SCAMP3-204ENST00000465312 ANKRD18BA2A2Z9 1011 aa23.2■■□□□ 1.3
SCAMP3-204ENST00000465312 ITGA6P23229 1130 aa23.2■■□□□ 1.3
SCAMP3-204ENST00000465312 RRP1P56182 461 aaKnown RBP23.2■■□□□ 1.3
SCAMP3-204ENST00000465312 FOXO4P98177 505 aa23.2■■□□□ 1.3
SCAMP3-204ENST00000465312 CCDC57Q2TAC2 916 aa23.2■■□□□ 1.3
SCAMP3-204ENST00000465312 CCDC93Q567U6 631 aa23.2■■□□□ 1.3
SCAMP3-204ENST00000465312 COG6Q9Y2V7 657 aa23.2■■□□□ 1.3
SCAMP3-204ENST00000465312 BBOX1O75936 387 aa23.19■■□□□ 1.3
SCAMP3-204ENST00000465312 IGHMBP2P38935 993 aaKnown RBP23.19■■□□□ 1.3
SCAMP3-204ENST00000465312 IFIT5Q13325 482 aaKnown RBP23.19■■□□□ 1.3
SCAMP3-204ENST00000465312 LRRFIP2Q9Y608 721 aaKnown RBP23.19■■□□□ 1.3
SCAMP3-204ENST00000465312 SPEF2Q9C093 1822 aa23.18■■□□□ 1.3
SCAMP3-204ENST00000465312 RPS8P62241 208 aaKnown RBP23.18■■□□□ 1.3
SCAMP3-204ENST00000465312 OLFM4Q6UX06 510 aa23.18■■□□□ 1.3
SCAMP3-204ENST00000465312 GOLGB1Q14789 3259 aaKnown RBP23.18■■□□□ 1.3
SCAMP3-204ENST00000465312 CSF1RP07333 972 aa23.17■■□□□ 1.3
SCAMP3-204ENST00000465312 MVPQ14764 893 aaKnown RBP23.17■■□□□ 1.3
SCAMP3-204ENST00000465312 MPHOSPH8Q99549 860 aa23.17■■□□□ 1.3
SCAMP3-204ENST00000465312 GNAI2P04899 355 aa23.16■■□□□ 1.3
SCAMP3-204ENST00000465312 PDE3AQ14432 1141 aa23.16■■□□□ 1.3
SCAMP3-204ENST00000465312 C20orf194Q5TEA3 1177 aa23.16■■□□□ 1.3
SCAMP3-204ENST00000465312 TMC4Q7Z404 712 aa23.16■■□□□ 1.3
SCAMP3-204ENST00000465312 RTL9Q8NET4 1388 aa23.15■■□□□ 1.3
SCAMP3-204ENST00000465312 RASSF7Q02833 373 aa23.15■■□□□ 1.3
SCAMP3-204ENST00000465312 KAZALD1Q96I82 304 aa23.15■■□□□ 1.3
SCAMP3-204ENST00000465312 DDX19BQ9UMR2 479 aa23.15■■□□□ 1.3
SCAMP3-204ENST00000465312 ATP6V0A2Q9Y487 856 aa23.15■■□□□ 1.3
SCAMP3-204ENST00000465312 CC2D2BQ6DHV5 1058 aa23.14■■□□□ 1.29
SCAMP3-204ENST00000465312 RTKN2Q8IZC4 609 aa23.14■■□□□ 1.29
SCAMP3-204ENST00000465312 ANKRD44Q8N8A2 993 aa23.14■■□□□ 1.29
SCAMP3-204ENST00000465312 C1orf115Q9H7X2 142 aa23.14■■□□□ 1.29
SCAMP3-204ENST00000465312 SLC51AQ86UW1 340 aa23.13■■□□□ 1.29
SCAMP3-204ENST00000465312 SP8Q8IXZ3 490 aa23.13■■□□□ 1.29
SCAMP3-204ENST00000465312 TAOK3Q9H2K8 898 aa23.13■■□□□ 1.29
SCAMP3-204ENST00000465312 CHMP4BQ9H444 224 aaKnown RBP23.13■■□□□ 1.29
SCAMP3-204ENST00000465312 SUPT16HQ9Y5B9 1047 aaKnown RBP23.13■■□□□ 1.29
SCAMP3-204ENST00000465312 COL4A1P02462 1669 aa23.13■■□□□ 1.29
SCAMP3-204ENST00000465312 DPP8Q6V1X1 898 aaPredicted RBP23.12■■□□□ 1.29
SCAMP3-204ENST00000465312 C7orf43Q8WVR3 580 aa23.12■■□□□ 1.29
SCAMP3-204ENST00000465312 ZNF594Q96JF6 807 aaPredicted RBP23.12■■□□□ 1.29
SCAMP3-204ENST00000465312 CNNM1Q9NRU3 951 aa23.12■■□□□ 1.29
SCAMP3-204ENST00000465312 ANKIB1Q9P2G1 1089 aa23.12■■□□□ 1.29
SCAMP3-204ENST00000465312 RABL6Q3YEC7 729 aaPredicted RBP23.11■■□□□ 1.29
SCAMP3-204ENST00000465312 MPNDQ8N594 471 aa23.11■■□□□ 1.29
SCAMP3-204ENST00000465312 NSFL1CQ9UNZ2 370 aaKnown RBP23.11■■□□□ 1.29
SCAMP3-204ENST00000465312 ZBTB7BO15156 539 aaPredicted RBP23.1■■□□□ 1.29
SCAMP3-204ENST00000465312 NFKBIEO00221 500 aa23.09■■□□□ 1.29
SCAMP3-204ENST00000465312 FKBP4Q02790 459 aaKnown RBP eCLIP23.09■■□□□ 1.29
SCAMP3-204ENST00000465312 GRIPAP1Q4V328 841 aa23.09■■□□□ 1.29
SCAMP3-204ENST00000465312 LDHAL6AQ6ZMR3 332 aa23.09■■□□□ 1.29
SCAMP3-204ENST00000465312 BSDC1Q9NW68 430 aaPredicted RBP23.09■■□□□ 1.29
SCAMP3-204ENST00000465312 FER1L6Q2WGJ9 1857 aa23.09■■□□□ 1.29
SCAMP3-204ENST00000465312 C6orf229H3BNL8 230 aa23.08■■□□□ 1.29
SCAMP3-204ENST00000465312 SRGAP3O43295 1099 aa23.08■■□□□ 1.29
SCAMP3-204ENST00000465312 KLHDC4Q8TBB5 520 aa23.08■■□□□ 1.29
SCAMP3-204ENST00000465312 RNF181Q9P0P0 153 aa23.08■■□□□ 1.29
SCAMP3-204ENST00000465312 GPSM2P81274 684 aa23.07■■□□□ 1.28
SCAMP3-204ENST00000465312 SUPT20HQ8NEM7 779 aa23.07■■□□□ 1.28
SCAMP3-204ENST00000465312 ZNF277Q9NRM2 450 aaPredicted RBP23.07■■□□□ 1.28
SCAMP3-204ENST00000465312 LRRC37AA6NMS7 1700 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms