RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 ZBTB42B2RXF5 422 aa8.28□□□□□ -1.08
VPS8-217ENST00000465213 USP17L15C9J2P7 530 aa8.28□□□□□ -1.08
VPS8-217ENST00000465213 USP17L10C9JJH3 530 aa8.28□□□□□ -1.08
VPS8-217ENST00000465213 USP17L13C9JLJ4 530 aa8.28□□□□□ -1.08
VPS8-217ENST00000465213 USP17L12C9JPN9 530 aa8.28□□□□□ -1.08
VPS8-217ENST00000465213 USP17L11C9JVI0 530 aa8.28□□□□□ -1.08
VPS8-217ENST00000465213 USP17L21D6R901 530 aa8.28□□□□□ -1.08
VPS8-217ENST00000465213 USP17L18D6R9N7 530 aa8.28□□□□□ -1.08
VPS8-217ENST00000465213 USP17L22D6RA61 530 aa8.28□□□□□ -1.08
VPS8-217ENST00000465213 USP17L17D6RBQ6 530 aa8.28□□□□□ -1.08
VPS8-217ENST00000465213 USP17L19D6RCP7 530 aa8.28□□□□□ -1.08
VPS8-217ENST00000465213 USP17L20D6RJB6 530 aa8.28□□□□□ -1.08
VPS8-217ENST00000465213 ARSDP51689 593 aa8.28□□□□□ -1.08
VPS8-217ENST00000465213 GPLD1P80108 840 aa8.28□□□□□ -1.08
VPS8-217ENST00000465213 USP17L24Q0WX57 530 aa8.28□□□□□ -1.08
VPS8-217ENST00000465213 DHX32Q7L7V1 743 aaKnown RBP8.28□□□□□ -1.08
VPS8-217ENST00000465213 TP53INP1Q96A56 240 aa8.28□□□□□ -1.08
VPS8-217ENST00000465213 MYO19Q96H55 970 aa8.28□□□□□ -1.08
VPS8-217ENST00000465213 USP21Q9UK80 565 aa8.28□□□□□ -1.08
VPS8-217ENST00000465213 FOXO3O43524 673 aa8.27□□□□□ -1.09
VPS8-217ENST00000465213 CPB1P15086 417 aa8.27□□□□□ -1.09
VPS8-217ENST00000465213 WEE1P30291 646 aa8.27□□□□□ -1.09
VPS8-217ENST00000465213 PERM1Q5SV97 790 aa8.27□□□□□ -1.09
VPS8-217ENST00000465213 CFAP70Q5T0N1 1121 aa8.27□□□□□ -1.09
VPS8-217ENST00000465213 QTRT2Q9H974 415 aaKnown RBP8.27□□□□□ -1.09
VPS8-217ENST00000465213 KLK14Q9P0G3 267 aa8.27□□□□□ -1.09
VPS8-217ENST00000465213 LMOD1P29536 600 aaPredicted RBP8.26□□□□□ -1.09
VPS8-217ENST00000465213 DGKZQ13574 1117 aa8.26□□□□□ -1.09
VPS8-217ENST00000465213 IFT43Q96FT9 208 aa8.26□□□□□ -1.09
VPS8-217ENST00000465213 ARXQ96QS3 562 aa8.26□□□□□ -1.09
VPS8-217ENST00000465213 MICAL2O94851 1124 aa8.25□□□□□ -1.09
VPS8-217ENST00000465213 EGFRP00533 1210 aa8.25□□□□□ -1.09
VPS8-217ENST00000465213 WFDC12Q8WWY7 111 aa8.25□□□□□ -1.09
VPS8-217ENST00000465213 VRTNQ9H8Y1 702 aa8.25□□□□□ -1.09
VPS8-217ENST00000465213 LGR5O75473 907 aa8.24□□□□□ -1.09
VPS8-217ENST00000465213 TARSP26639 723 aaKnown RBP8.24□□□□□ -1.09
VPS8-217ENST00000465213 NRLP54845 237 aa8.24□□□□□ -1.09
VPS8-217ENST00000465213 PLAURQ03405 335 aa8.24□□□□□ -1.09
VPS8-217ENST00000465213 C11orf91Q3C1V1 193 aa8.24□□□□□ -1.09
VPS8-217ENST00000465213 ELMSAN1Q6PJG2 1045 aa8.24□□□□□ -1.09
VPS8-217ENST00000465213 IGF2-ASQ6U949 168 aa8.24□□□□□ -1.09
VPS8-217ENST00000465213 NBPF11Q86T75 865 aa8.24□□□□□ -1.09
VPS8-217ENST00000465213 C14orf37Q86TY3 774 aa8.24□□□□□ -1.09
VPS8-217ENST00000465213 WFDC8Q8IUA0 241 aa8.24□□□□□ -1.09
VPS8-217ENST00000465213 RARAP10276 462 aa8.23□□□□□ -1.09
VPS8-217ENST00000465213 ARID4AP29374 1257 aaPredicted RBP8.23□□□□□ -1.09
VPS8-217ENST00000465213 KRT25Q7Z3Z0 450 aa8.23□□□□□ -1.09
VPS8-217ENST00000465213 ARID3CA6NKF2 412 aa8.22□□□□□ -1.09
VPS8-217ENST00000465213 OPLAHO14841 1288 aa8.22□□□□□ -1.09
VPS8-217ENST00000465213 HYAL3O43820 417 aaPredicted RBP8.22□□□□□ -1.09
VPS8-217ENST00000465213 DEAF1O75398 565 aaPredicted RBP8.22□□□□□ -1.09
VPS8-217ENST00000465213 SASH3O75995 380 aa8.22□□□□□ -1.09
VPS8-217ENST00000465213 NOS3P29474 1203 aa8.22□□□□□ -1.09
VPS8-217ENST00000465213 DLL1O00548 723 aa8.21□□□□□ -1.1
VPS8-217ENST00000465213 HOXD8P13378 290 aaPredicted RBP8.21□□□□□ -1.1
VPS8-217ENST00000465213 IREB2P48200 963 aaKnown RBP8.21□□□□□ -1.1
VPS8-217ENST00000465213 TLR7Q9NYK1 1049 aaKnown RBP8.21□□□□□ -1.1
VPS8-217ENST00000465213 RFX1P22670 979 aa8.2□□□□□ -1.1
VPS8-217ENST00000465213 MLLT1Q03111 559 aaPredicted RBP8.2□□□□□ -1.1
VPS8-217ENST00000465213 MEGF10Q96KG7 1140 aa8.2□□□□□ -1.1
VPS8-217ENST00000465213 SMG9Q9H0W8 520 aaKnown RBP8.2□□□□□ -1.1
VPS8-217ENST00000465213 RNF112Q9ULX5 631 aa8.2□□□□□ -1.1
VPS8-217ENST00000465213 RTCBQ9Y3I0 505 aaKnown RBP8.2□□□□□ -1.1
VPS8-217ENST00000465213 SRPK2P78362 688 aaKnown RBP8.19□□□□□ -1.1
VPS8-217ENST00000465213 CDCA8Q53HL2 280 aa8.19□□□□□ -1.1
VPS8-217ENST00000465213 VTI1AQ96AJ9 217 aa8.19□□□□□ -1.1
VPS8-217ENST00000465213 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.19□□□□□ -1.1
VPS8-217ENST00000465213 LRFN2Q9ULH4 789 aa8.19□□□□□ -1.1
VPS8-217ENST00000465213 SOX18P35713 384 aa8.18□□□□□ -1.1
VPS8-217ENST00000465213 PRR23CQ6ZRP0 262 aa8.18□□□□□ -1.1
VPS8-217ENST00000465213 DZIP1LQ8IYY4 767 aaKnown RBP8.18□□□□□ -1.1
VPS8-217ENST00000465213 TMEM130Q8N3G9 435 aa8.18□□□□□ -1.1
VPS8-217ENST00000465213 SRA1Q9HD15 236 aaKnown RBP8.18□□□□□ -1.1
VPS8-217ENST00000465213 XYLBO75191 536 aa8.17□□□□□ -1.1
VPS8-217ENST00000465213 EIF2AK2P19525 551 aaKnown RBP8.17□□□□□ -1.1
VPS8-217ENST00000465213 SLC51AQ86UW1 340 aa8.17□□□□□ -1.1
VPS8-217ENST00000465213 KRTAP4-12Q9BQ66 201 aa8.17□□□□□ -1.1
VPS8-217ENST00000465213 C1orf115Q9H7X2 142 aa8.17□□□□□ -1.1
VPS8-217ENST00000465213 KCNMB2Q9Y691 235 aa8.17□□□□□ -1.1
VPS8-217ENST00000465213 HFE2Q6ZVN8 426 aa8.16□□□□□ -1.1
VPS8-217ENST00000465213 TREML1Q86YW5 311 aa8.16□□□□□ -1.1
VPS8-217ENST00000465213 FAM200AQ8TCP9 573 aa8.16□□□□□ -1.1
VPS8-217ENST00000465213 PLD4Q96BZ4 506 aa8.16□□□□□ -1.1
VPS8-217ENST00000465213 AKTIPQ9H8T0 292 aa8.16□□□□□ -1.1
VPS8-217ENST00000465213 SERPINA10Q9UK55 444 aa8.16□□□□□ -1.1
VPS8-217ENST00000465213 LOC102724428A0A0B4J2F2 783 aa8.15□□□□□ -1.1
VPS8-217ENST00000465213 PSAPP07602 524 aa8.15□□□□□ -1.1
VPS8-217ENST00000465213 SIK1P57059 783 aa8.15□□□□□ -1.1
VPS8-217ENST00000465213 Q6ZS46 218 aa8.15□□□□□ -1.1
VPS8-217ENST00000465213 MAP4K3Q8IVH8 894 aa8.15□□□□□ -1.1
VPS8-217ENST00000465213 DCAF11Q8TEB1 546 aa8.15□□□□□ -1.1
VPS8-217ENST00000465213 CCDC97Q96F63 343 aaPredicted RBP8.15□□□□□ -1.1
VPS8-217ENST00000465213 MRPL18Q9H0U6 180 aaKnown RBP8.15□□□□□ -1.1
VPS8-217ENST00000465213 USP20Q9Y2K6 914 aa8.15□□□□□ -1.1
VPS8-217ENST00000465213 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.14□□□□□ -1.11
VPS8-217ENST00000465213 MMP20O60882 483 aa8.14□□□□□ -1.11
VPS8-217ENST00000465213 FKBP5Q13451 457 aaPredicted RBP8.14□□□□□ -1.11
VPS8-217ENST00000465213 COX20Q5RI15 118 aa8.14□□□□□ -1.11
VPS8-217ENST00000465213 RGL4Q8IZJ4 473 aa8.14□□□□□ -1.11
VPS8-217ENST00000465213 CACTIN-AS1Q8N1I8 211 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms