RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 EGFRP00533 1210 aa9.56□□□□□ -0.88
UBR4-209ENST00000465036 DGKZQ13574 1117 aa9.56□□□□□ -0.88
UBR4-209ENST00000465036 GRIK5Q16478 980 aa9.56□□□□□ -0.88
UBR4-209ENST00000465036 MSL1Q68DK7 614 aa9.56□□□□□ -0.88
UBR4-209ENST00000465036 FAM35AQ86V20 835 aa9.56□□□□□ -0.88
UBR4-209ENST00000465036 ZFATQ9P243 1243 aa9.56□□□□□ -0.88
UBR4-209ENST00000465036 GPLD1P80108 840 aa9.55□□□□□ -0.88
UBR4-209ENST00000465036 FOXD4L6Q3SYB3 417 aaPredicted RBP9.55□□□□□ -0.88
UBR4-209ENST00000465036 FOXD4L3Q6VB84 417 aaPredicted RBP9.55□□□□□ -0.88
UBR4-209ENST00000465036 DHX32Q7L7V1 743 aaKnown RBP9.55□□□□□ -0.88
UBR4-209ENST00000465036 DMRTC2Q8IXT2 367 aaPredicted RBP9.55□□□□□ -0.88
UBR4-209ENST00000465036 LPIN3Q9BQK8 851 aa9.55□□□□□ -0.88
UBR4-209ENST00000465036 SSBP4Q9BWG4 385 aaPredicted RBP9.55□□□□□ -0.88
UBR4-209ENST00000465036 ZBTB42B2RXF5 422 aa9.54□□□□□ -0.88
UBR4-209ENST00000465036 ARID4AP29374 1257 aaPredicted RBP9.54□□□□□ -0.88
UBR4-209ENST00000465036 PRSS36Q5K4E3 855 aa9.54□□□□□ -0.88
UBR4-209ENST00000465036 CFAP70Q5T0N1 1121 aa9.54□□□□□ -0.88
UBR4-209ENST00000465036 FBXO11Q86XK2 927 aa9.54□□□□□ -0.88
UBR4-209ENST00000465036 FAM200AQ8TCP9 573 aa9.54□□□□□ -0.88
UBR4-209ENST00000465036 VTI1AQ96AJ9 217 aa9.54□□□□□ -0.88
UBR4-209ENST00000465036 IFT43Q96FT9 208 aa9.54□□□□□ -0.88
UBR4-209ENST00000465036 LGR5O75473 907 aa9.53□□□□□ -0.88
UBR4-209ENST00000465036 TARSP26639 723 aaKnown RBP9.53□□□□□ -0.88
UBR4-209ENST00000465036 NRLP54845 237 aa9.53□□□□□ -0.88
UBR4-209ENST00000465036 SHISA2Q6UWI4 295 aa9.53□□□□□ -0.88
UBR4-209ENST00000465036 KRTAP4-8Q9BYQ9 185 aa9.53□□□□□ -0.88
UBR4-209ENST00000465036 OPLAHO14841 1288 aa9.52□□□□□ -0.89
UBR4-209ENST00000465036 PERM1Q5SV97 790 aa9.52□□□□□ -0.89
UBR4-209ENST00000465036 ARTNQ5T4W7 220 aa9.52□□□□□ -0.89
UBR4-209ENST00000465036 RARAP10276 462 aa9.51□□□□□ -0.89
UBR4-209ENST00000465036 CPB1P15086 417 aa9.51□□□□□ -0.89
UBR4-209ENST00000465036 ELMSAN1Q6PJG2 1045 aa9.51□□□□□ -0.89
UBR4-209ENST00000465036 TLR7Q9NYK1 1049 aaKnown RBP9.51□□□□□ -0.89
UBR4-209ENST00000465036 SWI5Q1ZZU3 235 aa9.5□□□□□ -0.89
UBR4-209ENST00000465036 IGF2-ASQ6U949 168 aa9.5□□□□□ -0.89
UBR4-209ENST00000465036 USP21Q9UK80 565 aa9.5□□□□□ -0.89
UBR4-209ENST00000465036 LRFN2Q9ULH4 789 aa9.5□□□□□ -0.89
UBR4-209ENST00000465036 RTCBQ9Y3I0 505 aaKnown RBP9.5□□□□□ -0.89
UBR4-209ENST00000465036 SASH3O75995 380 aa9.49□□□□□ -0.89
UBR4-209ENST00000465036 HOXD8P13378 290 aaPredicted RBP9.49□□□□□ -0.89
UBR4-209ENST00000465036 WFDC8Q8IUA0 241 aa9.49□□□□□ -0.89
UBR4-209ENST00000465036 ZFP64Q9NPA5 681 aa9.49□□□□□ -0.89
UBR4-209ENST00000465036 KRT25Q7Z3Z0 450 aa9.48□□□□□ -0.89
UBR4-209ENST00000465036 TP53INP1Q96A56 240 aa9.48□□□□□ -0.89
UBR4-209ENST00000465036 SCO2A0A1W2PP80 73 aa9.47□□□□□ -0.89
UBR4-209ENST00000465036 SOX18P35713 384 aa9.47□□□□□ -0.89
UBR4-209ENST00000465036 ELOAQ14241 798 aaKnown RBP9.47□□□□□ -0.89
UBR4-209ENST00000465036 ACIN1Q9UKV3 1341 aaKnown RBP9.47□□□□□ -0.89
UBR4-209ENST00000465036 XYLBO75191 536 aa9.46□□□□□ -0.9
UBR4-209ENST00000465036 PLAURQ03405 335 aa9.46□□□□□ -0.9
UBR4-209ENST00000465036 TREML1Q86YW5 311 aa9.46□□□□□ -0.9
UBR4-209ENST00000465036 WFDC12Q8WWY7 111 aa9.46□□□□□ -0.9
UBR4-209ENST00000465036 COL26A1Q96A83 441 aa9.46□□□□□ -0.9
UBR4-209ENST00000465036 PSMG3-AS1Q96PY0 264 aa9.46□□□□□ -0.9
UBR4-209ENST00000465036 NOVA2Q9UNW9 492 aaKnown RBP9.46□□□□□ -0.9
UBR4-209ENST00000465036 RFX1P22670 979 aa9.45□□□□□ -0.9
UBR4-209ENST00000465036 COX20Q5RI15 118 aa9.45□□□□□ -0.9
UBR4-209ENST00000465036 SMG9Q9H0W8 520 aaKnown RBP9.45□□□□□ -0.9
UBR4-209ENST00000465036 SRA1Q9HD15 236 aaKnown RBP9.45□□□□□ -0.9
UBR4-209ENST00000465036 KCNMB2Q9Y691 235 aa9.45□□□□□ -0.9
UBR4-209ENST00000465036 LOC102724428A0A0B4J2F2 783 aa9.44□□□□□ -0.9
UBR4-209ENST00000465036 DLL1O00548 723 aa9.44□□□□□ -0.9
UBR4-209ENST00000465036 DEAF1O75398 565 aaPredicted RBP9.44□□□□□ -0.9
UBR4-209ENST00000465036 PSAPP07602 524 aa9.44□□□□□ -0.9
UBR4-209ENST00000465036 SIK1P57059 783 aa9.44□□□□□ -0.9
UBR4-209ENST00000465036 MLLT1Q03111 559 aaPredicted RBP9.44□□□□□ -0.9
UBR4-209ENST00000465036 FKBP5Q13451 457 aaPredicted RBP9.44□□□□□ -0.9
UBR4-209ENST00000465036 CACTIN-AS1Q8N1I8 211 aa9.44□□□□□ -0.9
UBR4-209ENST00000465036 NOS3P29474 1203 aa9.43□□□□□ -0.9
UBR4-209ENST00000465036 LRP8Q14114 963 aa9.43□□□□□ -0.9
UBR4-209ENST00000465036 RGL4Q8IZJ4 473 aa9.43□□□□□ -0.9
UBR4-209ENST00000465036 CMTR1Q8N1G2 835 aaKnown RBP9.43□□□□□ -0.9
UBR4-209ENST00000465036 TMEM130Q8N3G9 435 aa9.43□□□□□ -0.9
UBR4-209ENST00000465036 DCAF11Q8TEB1 546 aa9.43□□□□□ -0.9
UBR4-209ENST00000465036 EIF2AK2P19525 551 aaKnown RBP9.42□□□□□ -0.9
UBR4-209ENST00000465036 OCLNQ16625 522 aa9.42□□□□□ -0.9
UBR4-209ENST00000465036 SLC51AQ86UW1 340 aa9.42□□□□□ -0.9
UBR4-209ENST00000465036 MAP4K3Q8IVH8 894 aa9.42□□□□□ -0.9
UBR4-209ENST00000465036 PLD4Q96BZ4 506 aa9.42□□□□□ -0.9
UBR4-209ENST00000465036 ZNF777Q9ULD5 760 aaPredicted RBP9.42□□□□□ -0.9
UBR4-209ENST00000465036 MMP20O60882 483 aa9.41□□□□□ -0.9
UBR4-209ENST00000465036 BRD2P25440 801 aaKnown RBP9.41□□□□□ -0.9
UBR4-209ENST00000465036 IREB2P48200 963 aaKnown RBP9.41□□□□□ -0.9
UBR4-209ENST00000465036 FAM69CQ0P6D2 419 aa9.41□□□□□ -0.9
UBR4-209ENST00000465036 HFE2Q6ZVN8 426 aa9.41□□□□□ -0.9
UBR4-209ENST00000465036 C16orf46Q6P387 395 aa9.4□□□□□ -0.9
UBR4-209ENST00000465036 NLRP13Q86W25 1043 aa9.4□□□□□ -0.9
UBR4-209ENST00000465036 DZIP1LQ8IYY4 767 aaKnown RBP9.4□□□□□ -0.9
UBR4-209ENST00000465036 RBSNQ9H1K0 784 aa9.4□□□□□ -0.9
UBR4-209ENST00000465036 ZMIZ1Q9ULJ6 1067 aa9.4□□□□□ -0.9
UBR4-209ENST00000465036 USP20Q9Y2K6 914 aa9.4□□□□□ -0.9
UBR4-209ENST00000465036 GHRHP01286 108 aa9.39□□□□□ -0.91
UBR4-209ENST00000465036 SRPK2P78362 688 aaKnown RBP9.39□□□□□ -0.91
UBR4-209ENST00000465036 CDCA8Q53HL2 280 aa9.39□□□□□ -0.91
UBR4-209ENST00000465036 ETFBKMTQ8IXQ9 262 aa9.39□□□□□ -0.91
UBR4-209ENST00000465036 PRIMPOLQ96LW4 560 aa9.39□□□□□ -0.91
UBR4-209ENST00000465036 MRPL18Q9H0U6 180 aaKnown RBP9.39□□□□□ -0.91
UBR4-209ENST00000465036 FAM13BQ9NYF5 915 aa9.39□□□□□ -0.91
UBR4-209ENST00000465036 MEGF10Q96KG7 1140 aa9.38□□□□□ -0.91
UBR4-209ENST00000465036 MUC3BQ9H195 1237 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms