RNA–Protein interactions for RNA: ENST00000464833.1

CHRD-211, Transcript of chordin, humanhuman

TSL 5

Gene CHRD, Length 1,340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-211ENST00000464833 C9orf78Q9NZ63 289 aaPredicted RBP34.92■■■■□ 3.18
CHRD-211ENST00000464833 CTSWP56202 376 aa34.91■■■■□ 3.18
CHRD-211ENST00000464833 DDX46Q7L014 1031 aaKnown RBP34.9■■■■□ 3.18
CHRD-211ENST00000464833 CHD4Q14839 1912 aa34.89■■■■□ 3.18
CHRD-211ENST00000464833 C21orf2O43822 256 aa34.89■■■■□ 3.18
CHRD-211ENST00000464833 INTS3Q68E01 1043 aaKnown RBP34.89■■■■□ 3.18
CHRD-211ENST00000464833 COL4A1P02462 1669 aa34.89■■■■□ 3.18
CHRD-211ENST00000464833 NBPF7P0C2Y1 421 aaPredicted RBP34.88■■■■□ 3.17
CHRD-211ENST00000464833 CCDC152Q4G0S7 254 aa34.88■■■■□ 3.17
CHRD-211ENST00000464833 TTLL11Q8NHH1 800 aa34.88■■■■□ 3.17
CHRD-211ENST00000464833 USP44Q9H0E7 712 aa34.88■■■■□ 3.17
CHRD-211ENST00000464833 FER1L6Q2WGJ9 1857 aa34.88■■■■□ 3.17
CHRD-211ENST00000464833 ZNF219Q9P2Y4 722 aaPredicted RBP34.87■■■■□ 3.17
CHRD-211ENST00000464833 GRAPQ13588 217 aa34.86■■■■□ 3.17
CHRD-211ENST00000464833 ARHGAP27Q6ZUM4 889 aa34.86■■■■□ 3.17
CHRD-211ENST00000464833 GRAPLQ8TC17 118 aaPredicted RBP34.86■■■■□ 3.17
CHRD-211ENST00000464833 CLUAP1Q96AJ1 413 aa34.86■■■■□ 3.17
CHRD-211ENST00000464833 RTL9Q8NET4 1388 aa34.85■■■■□ 3.17
CHRD-211ENST00000464833 PPEF1O14829 653 aaPredicted RBP34.84■■■■□ 3.17
CHRD-211ENST00000464833 FOXO4P98177 505 aa34.84■■■■□ 3.17
CHRD-211ENST00000464833 BBOX1O75936 387 aa34.83■■■■□ 3.17
CHRD-211ENST00000464833 CSF1RP07333 972 aa34.83■■■■□ 3.17
CHRD-211ENST00000464833 SOGA3Q5TF21 947 aa34.83■■■■□ 3.17
CHRD-211ENST00000464833 CCDC85AQ96PX6 553 aaPredicted RBP34.83■■■■□ 3.17
CHRD-211ENST00000464833 SEC31BQ9NQW1 1179 aa34.83■■■■□ 3.17
CHRD-211ENST00000464833 EPHA10Q5JZY3 1008 aa34.82■■■■□ 3.17
CHRD-211ENST00000464833 OLFM4Q6UX06 510 aa34.82■■■■□ 3.17
CHRD-211ENST00000464833 CELF1Q92879 486 aaKnown RBP34.82■■■■□ 3.17
CHRD-211ENST00000464833 KAZALD1Q96I82 304 aa34.82■■■■□ 3.17
CHRD-211ENST00000464833 SUCLG2Q96I99 432 aa34.82■■■■□ 3.17
CHRD-211ENST00000464833 SNED1Q8TER0 1413 aa34.82■■■■□ 3.16
CHRD-211ENST00000464833 GREM2Q9H772 168 aa34.81■■■■□ 3.16
CHRD-211ENST00000464833 CCDC93Q567U6 631 aa34.81■■■■□ 3.16
CHRD-211ENST00000464833 SLC51AQ86UW1 340 aa34.81■■■■□ 3.16
CHRD-211ENST00000464833 LRRC37AA6NMS7 1700 aa34.8■■■■□ 3.16
CHRD-211ENST00000464833 SBF1O95248 1867 aa34.8■■■■□ 3.16
CHRD-211ENST00000464833 NFKBIEO00221 500 aa34.8■■■■□ 3.16
CHRD-211ENST00000464833 DZIP1LQ8IYY4 767 aaKnown RBP34.8■■■■□ 3.16
CHRD-211ENST00000464833 ATP6V0A2Q9Y487 856 aa34.8■■■■□ 3.16
CHRD-211ENST00000464833 RLBP1P12271 317 aa34.79■■■■□ 3.16
CHRD-211ENST00000464833 CC2D2BQ6DHV5 1058 aa34.79■■■■□ 3.16
CHRD-211ENST00000464833 TMEM57Q8N5G2 664 aa34.79■■■■□ 3.16
CHRD-211ENST00000464833 RPS8P62241 208 aaKnown RBP34.78■■■■□ 3.16
CHRD-211ENST00000464833 FAM161AQ3B820 660 aa34.78■■■■□ 3.16
CHRD-211ENST00000464833 TMC4Q7Z404 712 aa34.78■■■■□ 3.16
CHRD-211ENST00000464833 FTSJ3Q8IY81 847 aaKnown RBP34.77■■■■□ 3.16
CHRD-211ENST00000464833 RASSF7Q02833 373 aa34.76■■■■□ 3.15
CHRD-211ENST00000464833 LMBR1LQ6UX01 489 aa34.76■■■■□ 3.15
CHRD-211ENST00000464833 SP8Q8IXZ3 490 aa34.76■■■■□ 3.15
CHRD-211ENST00000464833 MEIS3Q99687 375 aa34.76■■■■□ 3.15
CHRD-211ENST00000464833 LTBP3Q9NS15 1303 aa34.75■■■■□ 3.15
CHRD-211ENST00000464833 RTKN2Q8IZC4 609 aa34.75■■■■□ 3.15
CHRD-211ENST00000464833 SPEF2Q9C093 1822 aa34.74■■■■□ 3.15
CHRD-211ENST00000464833 CCDC88AQ3V6T2 1871 aa34.74■■■■□ 3.15
CHRD-211ENST00000464833 UBTFL1P0CB47 393 aaPredicted RBP34.74■■■■□ 3.15
CHRD-211ENST00000464833 ITGA6P23229 1130 aa34.74■■■■□ 3.15
CHRD-211ENST00000464833 RABL6Q3YEC7 729 aaPredicted RBP34.74■■■■□ 3.15
CHRD-211ENST00000464833 CDC5LQ99459 802 aaKnown RBP34.74■■■■□ 3.15
CHRD-211ENST00000464833 BICC1Q9H694 974 aaKnown RBP34.74■■■■□ 3.15
CHRD-211ENST00000464833 PLIN1O60240 522 aa34.73■■■■□ 3.15
CHRD-211ENST00000464833 GRIPAP1Q4V328 841 aa34.73■■■■□ 3.15
CHRD-211ENST00000464833 ANKRD44Q8N8A2 993 aa34.73■■■■□ 3.15
CHRD-211ENST00000464833 TAOK3Q9H2K8 898 aa34.73■■■■□ 3.15
CHRD-211ENST00000464833 ANKRD18AQ8IVF6 992 aa34.72■■■■□ 3.15
CHRD-211ENST00000464833 PRELPP51888 382 aa34.71■■■■□ 3.15
CHRD-211ENST00000464833 PANK1Q8TE04 598 aa34.71■■■■□ 3.15
CHRD-211ENST00000464833 MS4A1P11836 297 aa34.7■■■■□ 3.15
CHRD-211ENST00000464833 FKBP4Q02790 459 aaKnown RBP eCLIP34.7■■■■□ 3.15
CHRD-211ENST00000464833 CHMP3Q9Y3E7 222 aa34.7■■■■□ 3.15
CHRD-211ENST00000464833 GNAI3P08754 354 aa34.69■■■■□ 3.14
CHRD-211ENST00000464833 PSMD1Q99460 953 aa34.69■■■■□ 3.14
CHRD-211ENST00000464833 TMX4Q9H1E5 349 aaPredicted RBP34.69■■■■□ 3.14
CHRD-211ENST00000464833 LTBP1Q14766 1721 aa34.69■■■■□ 3.14
CHRD-211ENST00000464833 ANKRD18BA2A2Z9 1011 aa34.68■■■■□ 3.14
CHRD-211ENST00000464833 IFIT5Q13325 482 aaKnown RBP34.68■■■■□ 3.14
CHRD-211ENST00000464833 DICER1Q9UPY3 1922 aaKnown RBP34.67■■■■□ 3.14
CHRD-211ENST00000464833 LMNB1P20700 586 aa34.67■■■■□ 3.14
CHRD-211ENST00000464833 ITPRIPQ8IWB1 547 aa34.67■■■■□ 3.14
CHRD-211ENST00000464833 HDAC5Q9UQL6 1122 aa34.67■■■■□ 3.14
CHRD-211ENST00000464833 LRRFIP2Q9Y608 721 aaKnown RBP34.67■■■■□ 3.14
CHRD-211ENST00000464833 GOLGA6L2Q8N9W4 650 aaPredicted RBP34.66■■■■□ 3.14
CHRD-211ENST00000464833 BSDC1Q9NW68 430 aaPredicted RBP34.66■■■■□ 3.14
CHRD-211ENST00000464833 DUOX1Q9NRD9 1551 aa34.66■■■■□ 3.14
CHRD-211ENST00000464833 CCDC57Q2TAC2 916 aa34.65■■■■□ 3.14
CHRD-211ENST00000464833 C9orf131Q5VYM1 1079 aa34.65■■■■□ 3.14
CHRD-211ENST00000464833 IGHMBP2P38935 993 aaKnown RBP34.64■■■■□ 3.14
CHRD-211ENST00000464833 MPNDQ8N594 471 aa34.64■■■■□ 3.14
CHRD-211ENST00000464833 RTFDC1Q9BY42 306 aaPredicted RBP34.63■■■■□ 3.13
CHRD-211ENST00000464833 RNF181Q9P0P0 153 aa34.63■■■■□ 3.13
CHRD-211ENST00000464833 PDE3AQ14432 1141 aa34.62■■■■□ 3.13
CHRD-211ENST00000464833 DPP8Q6V1X1 898 aaPredicted RBP34.62■■■■□ 3.13
CHRD-211ENST00000464833 ZNF277Q9NRM2 450 aaPredicted RBP34.62■■■■□ 3.13
CHRD-211ENST00000464833 ZBTB7BO15156 539 aaPredicted RBP34.61■■■■□ 3.13
CHRD-211ENST00000464833 GPSM2P81274 684 aa34.61■■■■□ 3.13
CHRD-211ENST00000464833 C20orf194Q5TEA3 1177 aa34.6■■■■□ 3.13
CHRD-211ENST00000464833 ZNF594Q96JF6 807 aaPredicted RBP34.6■■■■□ 3.13
CHRD-211ENST00000464833 MPHOSPH8Q99549 860 aa34.6■■■■□ 3.13
CHRD-211ENST00000464833 TIAM2Q8IVF5 1701 aa34.6■■■■□ 3.13
CHRD-211ENST00000464833 MVPQ14764 893 aaKnown RBP34.59■■■■□ 3.13
CHRD-211ENST00000464833 PODXL2Q9NZ53 605 aa34.59■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms