RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 RASSF7Q02833 373 aa15.22■□□□□ 0.03
RPUSD3-211ENST00000464783 FRAT1Q92837 279 aaPredicted RBP15.22■□□□□ 0.03
RPUSD3-211ENST00000464783 CCDC85AQ96PX6 553 aaPredicted RBP15.22■□□□□ 0.03
RPUSD3-211ENST00000464783 TIAM2Q8IVF5 1701 aa15.21■□□□□ 0.03
RPUSD3-211ENST00000464783 GRM8O00222 908 aa15.21■□□□□ 0.03
RPUSD3-211ENST00000464783 IPO8O15397 1037 aaKnown RBP15.21■□□□□ 0.03
RPUSD3-211ENST00000464783 BCAR3O75815 825 aa15.21■□□□□ 0.03
RPUSD3-211ENST00000464783 BRPF1P55201 1214 aaPredicted RBP15.21■□□□□ 0.03
RPUSD3-211ENST00000464783 CTSWP56202 376 aa15.21■□□□□ 0.03
RPUSD3-211ENST00000464783 GRAPQ13588 217 aa15.21■□□□□ 0.03
RPUSD3-211ENST00000464783 GRAPLQ8TC17 118 aaPredicted RBP15.21■□□□□ 0.03
RPUSD3-211ENST00000464783 TAOK3Q9H2K8 898 aa15.21■□□□□ 0.03
RPUSD3-211ENST00000464783 DICER1Q9UPY3 1922 aaKnown RBP15.21■□□□□ 0.02
RPUSD3-211ENST00000464783 BBOX1O75936 387 aa15.2■□□□□ 0.02
RPUSD3-211ENST00000464783 OLFM4Q6UX06 510 aa15.2■□□□□ 0.02
RPUSD3-211ENST00000464783 C7orf43Q8WVR3 580 aa15.2■□□□□ 0.02
RPUSD3-211ENST00000464783 RNF181Q9P0P0 153 aa15.2■□□□□ 0.02
RPUSD3-211ENST00000464783 NFKBIEO00221 500 aa15.19■□□□□ 0.02
RPUSD3-211ENST00000464783 CCT4P50991 539 aaKnown RBP15.19■□□□□ 0.02
RPUSD3-211ENST00000464783 C9orf131Q5VYM1 1079 aa15.19■□□□□ 0.02
RPUSD3-211ENST00000464783 CC2D2BQ6DHV5 1058 aa15.19■□□□□ 0.02
RPUSD3-211ENST00000464783 RTKN2Q8IZC4 609 aa15.19■□□□□ 0.02
RPUSD3-211ENST00000464783 ARHGAP45Q92619 1136 aa15.19■□□□□ 0.02
RPUSD3-211ENST00000464783 LRRC37AA6NMS7 1700 aa15.19■□□□□ 0.02
RPUSD3-211ENST00000464783 LMNB1P20700 586 aa15.18■□□□□ 0.02
RPUSD3-211ENST00000464783 CASP7P55210 303 aa15.18■□□□□ 0.02
RPUSD3-211ENST00000464783 TMC4Q7Z404 712 aa15.18■□□□□ 0.02
RPUSD3-211ENST00000464783 CELF1Q92879 486 aaKnown RBP15.18■□□□□ 0.02
RPUSD3-211ENST00000464783 SEC31BQ9NQW1 1179 aa15.18■□□□□ 0.02
RPUSD3-211ENST00000464783 CHMP3Q9Y3E7 222 aa15.18■□□□□ 0.02
RPUSD3-211ENST00000464783 ATP6V0A2Q9Y487 856 aa15.18■□□□□ 0.02
RPUSD3-211ENST00000464783 COL4A1P02462 1669 aa15.17■□□□□ 0.02
RPUSD3-211ENST00000464783 FKBP4Q02790 459 aaKnown RBP eCLIP15.17■□□□□ 0.02
RPUSD3-211ENST00000464783 GRIPAP1Q4V328 841 aa15.17■□□□□ 0.02
RPUSD3-211ENST00000464783 ZKSCAN2Q63HK3 967 aa15.17■□□□□ 0.02
RPUSD3-211ENST00000464783 TTLL11Q8NHH1 800 aa15.17■□□□□ 0.02
RPUSD3-211ENST00000464783 CDC5LQ99459 802 aaKnown RBP15.17■□□□□ 0.02
RPUSD3-211ENST00000464783 PLA2G12BQ9BX93 195 aa15.17■□□□□ 0.02
RPUSD3-211ENST00000464783 GREM2Q9H772 168 aa15.17■□□□□ 0.02
RPUSD3-211ENST00000464783 LTBP3Q9NS15 1303 aa15.17■□□□□ 0.02
RPUSD3-211ENST00000464783 RPS8P62241 208 aaKnown RBP15.16■□□□□ 0.02
RPUSD3-211ENST00000464783 ATF7IPQ6VMQ6 1270 aa15.16■□□□□ 0.02
RPUSD3-211ENST00000464783 ANKRD18AQ8IVF6 992 aa15.16■□□□□ 0.02
RPUSD3-211ENST00000464783 SP8Q8IXZ3 490 aa15.16■□□□□ 0.02
RPUSD3-211ENST00000464783 RTL9Q8NET4 1388 aa15.15■□□□□ 0.02
RPUSD3-211ENST00000464783 NBPF7P0C2Y1 421 aaPredicted RBP15.15■□□□□ 0.02
RPUSD3-211ENST00000464783 TRIM27P14373 513 aa15.15■□□□□ 0.02
RPUSD3-211ENST00000464783 FAM161AQ3B820 660 aa15.15■□□□□ 0.02
RPUSD3-211ENST00000464783 DPP8Q6V1X1 898 aaPredicted RBP15.15■□□□□ 0.02
RPUSD3-211ENST00000464783 SLC51AQ86UW1 340 aa15.15■□□□□ 0.02
RPUSD3-211ENST00000464783 CLUAP1Q96AJ1 413 aa15.15■□□□□ 0.02
RPUSD3-211ENST00000464783 ITGA6P23229 1130 aa15.14■□□□□ 0.01
RPUSD3-211ENST00000464783 FOXO4P98177 505 aa15.14■□□□□ 0.01
RPUSD3-211ENST00000464783 FTSJ3Q8IY81 847 aaKnown RBP15.14■□□□□ 0.01
RPUSD3-211ENST00000464783 MPNDQ8N594 471 aa15.14■□□□□ 0.01
RPUSD3-211ENST00000464783 SUCLG2Q96I99 432 aa15.14■□□□□ 0.01
RPUSD3-211ENST00000464783 PSMD1Q99460 953 aa15.14■□□□□ 0.01
RPUSD3-211ENST00000464783 ZNF277Q9NRM2 450 aaPredicted RBP15.14■□□□□ 0.01
RPUSD3-211ENST00000464783 UTYO14607 1347 aa15.14■□□□□ 0.01
RPUSD3-211ENST00000464783 ANKRD18BA2A2Z9 1011 aa15.13■□□□□ 0.01
RPUSD3-211ENST00000464783 CSF1RP07333 972 aa15.13■□□□□ 0.01
RPUSD3-211ENST00000464783 IGHMBP2P38935 993 aaKnown RBP15.13■□□□□ 0.01
RPUSD3-211ENST00000464783 PRELPP51888 382 aa15.13■□□□□ 0.01
RPUSD3-211ENST00000464783 IFIT5Q13325 482 aaKnown RBP15.13■□□□□ 0.01
RPUSD3-211ENST00000464783 LMBR1LQ6UX01 489 aa15.13■□□□□ 0.01
RPUSD3-211ENST00000464783 SUPT20HQ8NEM7 779 aa15.13■□□□□ 0.01
RPUSD3-211ENST00000464783 SNED1Q8TER0 1413 aa15.13■□□□□ 0.01
RPUSD3-211ENST00000464783 ZNF526Q8TF50 670 aaPredicted RBP15.13■□□□□ 0.01
RPUSD3-211ENST00000464783 USP44Q9H0E7 712 aa15.13■□□□□ 0.01
RPUSD3-211ENST00000464783 RCAN3Q9UKA8 241 aa15.13■□□□□ 0.01
RPUSD3-211ENST00000464783 NSFL1CQ9UNZ2 370 aaKnown RBP15.13■□□□□ 0.01
RPUSD3-211ENST00000464783 UBTFL1P0CB47 393 aaPredicted RBP15.12■□□□□ 0.01
RPUSD3-211ENST00000464783 IARSP41252 1262 aaKnown RBP15.12■□□□□ 0.01
RPUSD3-211ENST00000464783 CCDC57Q2TAC2 916 aa15.12■□□□□ 0.01
RPUSD3-211ENST00000464783 TAF7LQ5H9L4 462 aa15.12■□□□□ 0.01
RPUSD3-211ENST00000464783 EPHA10Q5JZY3 1008 aa15.12■□□□□ 0.01
RPUSD3-211ENST00000464783 INTS3Q68E01 1043 aaKnown RBP15.12■□□□□ 0.01
RPUSD3-211ENST00000464783 MPHOSPH8Q99549 860 aa15.12■□□□□ 0.01
RPUSD3-211ENST00000464783 BICC1Q9H694 974 aaKnown RBP15.12■□□□□ 0.01
RPUSD3-211ENST00000464783 ANKIB1Q9P2G1 1089 aa15.12■□□□□ 0.01
RPUSD3-211ENST00000464783 TNNQ9UQP3 1299 aa15.12■□□□□ 0.01
RPUSD3-211ENST00000464783 LTBP1Q14766 1721 aa15.12■□□□□ 0.01
RPUSD3-211ENST00000464783 ZNF784Q8NCA9 323 aaPredicted RBP15.11■□□□□ 0.01
RPUSD3-211ENST00000464783 HDAC5Q9UQL6 1122 aa15.11■□□□□ 0.01
RPUSD3-211ENST00000464783 ZC3H4Q9UPT8 1303 aaKnown RBP15.11■□□□□ 0.01
RPUSD3-211ENST00000464783 C6orf229H3BNL8 230 aa15.1■□□□□ 0.01
RPUSD3-211ENST00000464783 PPIP5K2O43314 1243 aa15.1■□□□□ 0.01
RPUSD3-211ENST00000464783 GPSM2P81274 684 aa15.1■□□□□ 0.01
RPUSD3-211ENST00000464783 DZIP1LQ8IYY4 767 aaKnown RBP15.1■□□□□ 0.01
RPUSD3-211ENST00000464783 LARGE2Q8N3Y3 721 aa15.1■□□□□ 0.01
RPUSD3-211ENST00000464783 JDP2Q8WYK2 163 aa15.1■□□□□ 0.01
RPUSD3-211ENST00000464783 A0A1B0GUL6 1792 aa15.1■□□□□ 0.01
RPUSD3-211ENST00000464783 DUOX1Q9NRD9 1551 aa15.1■□□□□ 0.01
RPUSD3-211ENST00000464783 GNAI3P08754 354 aa15.09■□□□□ 0.01
RPUSD3-211ENST00000464783 AOC3Q16853 763 aa15.09■□□□□ 0.01
RPUSD3-211ENST00000464783 TMEM57Q8N5G2 664 aa15.09■□□□□ 0.01
RPUSD3-211ENST00000464783 KAZALD1Q96I82 304 aa15.09■□□□□ 0.01
RPUSD3-211ENST00000464783 MEIS3Q99687 375 aa15.09■□□□□ 0.01
RPUSD3-211ENST00000464783 GPBP1L1Q9HC44 474 aaPredicted RBP15.09■□□□□ 0.01
RPUSD3-211ENST00000464783 BSDC1Q9NW68 430 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms