RNA–Protein interactions for RNA: ENST00000464576.1

PTPN18-209, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 5

Gene PTPN18, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-209ENST00000464576 GRAPLQ8TC17 118 aaPredicted RBP12.27□□□□□ -0.45
PTPN18-209ENST00000464576 CHPF2Q9P2E5 772 aa12.27□□□□□ -0.45
PTPN18-209ENST00000464576 DBF4Q9UBU7 674 aaPredicted RBP12.27□□□□□ -0.45
PTPN18-209ENST00000464576 LAMB2P55268 1798 aa12.26□□□□□ -0.45
PTPN18-209ENST00000464576 CHL1O00533 1208 aa12.26□□□□□ -0.45
PTPN18-209ENST00000464576 CXCL9Q07325 125 aa12.26□□□□□ -0.45
PTPN18-209ENST00000464576 LRP10Q7Z4F1 713 aa12.26□□□□□ -0.45
PTPN18-209ENST00000464576 PLBD2Q8NHP8 589 aa12.26□□□□□ -0.45
PTPN18-209ENST00000464576 ZNF428Q96B54 188 aa12.26□□□□□ -0.45
PTPN18-209ENST00000464576 HYPKQ9NX55 129 aa12.26□□□□□ -0.45
PTPN18-209ENST00000464576 WBP1LQ9NX94 342 aa12.26□□□□□ -0.45
PTPN18-209ENST00000464576 GPRC5DQ9NZD1 345 aa12.26□□□□□ -0.45
PTPN18-209ENST00000464576 SNED1Q8TER0 1413 aa12.26□□□□□ -0.45
PTPN18-209ENST00000464576 G3V3G9 751 aa12.25□□□□□ -0.45
PTPN18-209ENST00000464576 C6orf229H3BNL8 230 aa12.25□□□□□ -0.45
PTPN18-209ENST00000464576 H7C1D1 291 aa12.25□□□□□ -0.45
PTPN18-209ENST00000464576 RAD17O75943 681 aa12.25□□□□□ -0.45
PTPN18-209ENST00000464576 HSP90B1P14625 803 aaKnown RBP12.25□□□□□ -0.45
PTPN18-209ENST00000464576 GMPSP49915 693 aaPredicted RBP12.25□□□□□ -0.45
PTPN18-209ENST00000464576 LBX1P52954 281 aa12.25□□□□□ -0.45
PTPN18-209ENST00000464576 CALD1Q05682 793 aaKnown RBP12.25□□□□□ -0.45
PTPN18-209ENST00000464576 KIAA2012Q0VF49 1180 aa12.25□□□□□ -0.45
PTPN18-209ENST00000464576 DCAF8Q5TAQ9 597 aa12.25□□□□□ -0.45
PTPN18-209ENST00000464576 RTFDC1Q9BY42 306 aaPredicted RBP12.25□□□□□ -0.45
PTPN18-209ENST00000464576 NSFL1CQ9UNZ2 370 aaKnown RBP12.25□□□□□ -0.45
PTPN18-209ENST00000464576 COL4A5P29400 1685 aa12.25□□□□□ -0.45
PTPN18-209ENST00000464576 TRAF5O00463 557 aa12.24□□□□□ -0.45
PTPN18-209ENST00000464576 HOXB7P09629 217 aa12.24□□□□□ -0.45
PTPN18-209ENST00000464576 TAF1P21675 1872 aa12.24□□□□□ -0.45
PTPN18-209ENST00000464576 GOLGA2Q08379 1002 aa12.24□□□□□ -0.45
PTPN18-209ENST00000464576 KRT24Q2M2I5 525 aa12.24□□□□□ -0.45
PTPN18-209ENST00000464576 WASHC4Q2M389 1173 aa12.24□□□□□ -0.45
PTPN18-209ENST00000464576 RTL5Q5HYW3 569 aaPredicted RBP12.24□□□□□ -0.45
PTPN18-209ENST00000464576 RIC3Q7Z5B4 369 aa12.24□□□□□ -0.45
PTPN18-209ENST00000464576 FAM89AQ96GI7 184 aa12.24□□□□□ -0.45
PTPN18-209ENST00000464576 CAPNS2Q96L46 248 aa12.24□□□□□ -0.45
PTPN18-209ENST00000464576 GPR101Q96P66 508 aaPredicted RBP12.24□□□□□ -0.45
PTPN18-209ENST00000464576 CHMP4AQ9BY43 222 aa12.24□□□□□ -0.45
PTPN18-209ENST00000464576 CDHR2Q9BYE9 1310 aa12.24□□□□□ -0.45
PTPN18-209ENST00000464576 ZNF408Q9H9D4 720 aa12.24□□□□□ -0.45
PTPN18-209ENST00000464576 LTBP1Q14766 1721 aa12.23□□□□□ -0.45
PTPN18-209ENST00000464576 ATP5J2-PTCD1G3V325 749 aa12.23□□□□□ -0.45
PTPN18-209ENST00000464576 CELF2O95319 508 aaKnown RBP12.23□□□□□ -0.45
PTPN18-209ENST00000464576 DUSP27Q5VZP5 1158 aa12.23□□□□□ -0.45
PTPN18-209ENST00000464576 CYP4F22Q6NT55 531 aa12.23□□□□□ -0.45
PTPN18-209ENST00000464576 SLC51AQ86UW1 340 aa12.23□□□□□ -0.45
PTPN18-209ENST00000464576 CFAP44Q96MT7 982 aa12.23□□□□□ -0.45
PTPN18-209ENST00000464576 EYA3Q99504 573 aa12.23□□□□□ -0.45
PTPN18-209ENST00000464576 ADAMTS8Q9UP79 889 aa12.23□□□□□ -0.45
PTPN18-209ENST00000464576 TRIM35Q9UPQ4 493 aa12.23□□□□□ -0.45
PTPN18-209ENST00000464576 RIMBP2O15034 1052 aa12.22□□□□□ -0.45
PTPN18-209ENST00000464576 ZC3H15Q8WU90 426 aaKnown RBP12.22□□□□□ -0.45
PTPN18-209ENST00000464576 CNOT7Q9UIV1 285 aaKnown RBP12.22□□□□□ -0.45
PTPN18-209ENST00000464576 IRS4O14654 1257 aaPredicted RBP12.21□□□□□ -0.45
PTPN18-209ENST00000464576 FMR1Q06787 632 aaKnown RBP eCLIP12.21□□□□□ -0.45
PTPN18-209ENST00000464576 CST9Q5W186 159 aa12.21□□□□□ -0.45
PTPN18-209ENST00000464576 CDC37L1Q7L3B6 337 aa12.21□□□□□ -0.45
PTPN18-209ENST00000464576 ZC3H12CQ9C0D7 883 aaKnown RBP12.21□□□□□ -0.45
PTPN18-209ENST00000464576 TLL2Q9Y6L7 1015 aa12.21□□□□□ -0.45
PTPN18-209ENST00000464576 ELL2O00472 640 aaPredicted RBP12.2□□□□□ -0.46
PTPN18-209ENST00000464576 DDX58O95786 925 aaKnown RBP12.2□□□□□ -0.46
PTPN18-209ENST00000464576 HSPA8P11142 646 aaKnown RBP12.2□□□□□ -0.46
PTPN18-209ENST00000464576 MAP2K2P36507 400 aa12.2□□□□□ -0.46
PTPN18-209ENST00000464576 GNAI1P63096 354 aa12.2□□□□□ -0.46
PTPN18-209ENST00000464576 SF3B3Q15393 1217 aaKnown RBP12.2□□□□□ -0.46
PTPN18-209ENST00000464576 MICALL2Q8IY33 904 aa12.2□□□□□ -0.46
PTPN18-209ENST00000464576 ISCA1Q9BUE6 129 aa12.2□□□□□ -0.46
PTPN18-209ENST00000464576 GLIS2Q9BZE0 524 aaPredicted RBP12.2□□□□□ -0.46
PTPN18-209ENST00000464576 DBNDD1Q9H9R9 158 aa12.2□□□□□ -0.46
PTPN18-209ENST00000464576 MBIPQ9NS73 344 aa12.2□□□□□ -0.46
PTPN18-209ENST00000464576 ANKIB1Q9P2G1 1089 aa12.2□□□□□ -0.46
PTPN18-209ENST00000464576 DDX60Q8IY21 1712 aaKnown RBP12.2□□□□□ -0.46
PTPN18-209ENST00000464576 RPS8P62241 208 aaKnown RBP12.19□□□□□ -0.46
PTPN18-209ENST00000464576 RBM26Q5T8P6 1007 aaKnown RBP12.19□□□□□ -0.46
PTPN18-209ENST00000464576 DPF2Q92785 391 aa12.19□□□□□ -0.46
PTPN18-209ENST00000464576 CELF1Q92879 486 aaKnown RBP12.19□□□□□ -0.46
PTPN18-209ENST00000464576 IFT57Q9NWB7 429 aa12.19□□□□□ -0.46
PTPN18-209ENST00000464576 PSMD14O00487 310 aa12.18□□□□□ -0.46
PTPN18-209ENST00000464576 APAF1O14727 1248 aa12.18□□□□□ -0.46
PTPN18-209ENST00000464576 CA12O43570 354 aa12.18□□□□□ -0.46
PTPN18-209ENST00000464576 ECE2O60344 883 aa12.18□□□□□ -0.46
PTPN18-209ENST00000464576 AOC2O75106 756 aa12.18□□□□□ -0.46
PTPN18-209ENST00000464576 RPS12P25398 132 aaKnown RBP12.18□□□□□ -0.46
PTPN18-209ENST00000464576 TRIM28Q13263 835 aaKnown RBP12.18□□□□□ -0.46
PTPN18-209ENST00000464576 DOK7Q18PE1 504 aa12.18□□□□□ -0.46
PTPN18-209ENST00000464576 CCDC152Q4G0S7 254 aa12.18□□□□□ -0.46
PTPN18-209ENST00000464576 SAPCD2Q86UD0 394 aa12.18□□□□□ -0.46
PTPN18-209ENST00000464576 USP48Q86UV5 1035 aa12.18□□□□□ -0.46
PTPN18-209ENST00000464576 ZBTB38Q8NAP3 1195 aaPredicted RBP12.18□□□□□ -0.46
PTPN18-209ENST00000464576 DCPSQ96C86 337 aaKnown RBP12.18□□□□□ -0.46
PTPN18-209ENST00000464576 MYD88Q99836 296 aa12.18□□□□□ -0.46
PTPN18-209ENST00000464576 ZBTB12Q9Y330 459 aaPredicted RBP12.18□□□□□ -0.46
PTPN18-209ENST00000464576 YDJCA8MPS7 323 aa12.17□□□□□ -0.46
PTPN18-209ENST00000464576 GPSM2P81274 684 aa12.17□□□□□ -0.46
PTPN18-209ENST00000464576 TBC1D10BQ4KMP7 808 aaPredicted RBP12.17□□□□□ -0.46
PTPN18-209ENST00000464576 CCDC30Q5VVM6 783 aa12.17□□□□□ -0.46
PTPN18-209ENST00000464576 KRT26Q7Z3Y9 468 aa12.17□□□□□ -0.46
PTPN18-209ENST00000464576 C2orf69Q8N8R5 385 aa12.17□□□□□ -0.46
PTPN18-209ENST00000464576 CCDC191Q8NCU4 936 aa12.17□□□□□ -0.46
PTPN18-209ENST00000464576 TRPM4Q8TD43 1214 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms