RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 PCMTD2Q9NV79 361 aa7.73□□□□□ -1.17
PTPN12-210ENST00000464313 ANKIB1Q9P2G1 1089 aa7.73□□□□□ -1.17
PTPN12-210ENST00000464313 DKK1O94907 266 aa7.72□□□□□ -1.17
PTPN12-210ENST00000464313 RAC1P63000 192 aa7.72□□□□□ -1.17
PTPN12-210ENST00000464313 TMEM164Q5U3C3 297 aa7.72□□□□□ -1.17
PTPN12-210ENST00000464313 LENG1Q96BZ8 264 aaPredicted RBP7.72□□□□□ -1.17
PTPN12-210ENST00000464313 RNF114Q9Y508 228 aa7.72□□□□□ -1.17
PTPN12-210ENST00000464313 HIRAP54198 1017 aaPredicted RBP7.71□□□□□ -1.18
PTPN12-210ENST00000464313 NRG1Q02297 640 aaPredicted RBP7.71□□□□□ -1.18
PTPN12-210ENST00000464313 DPYDQ12882 1025 aa7.71□□□□□ -1.18
PTPN12-210ENST00000464313 ANKMY2Q8IV38 441 aa7.71□□□□□ -1.18
PTPN12-210ENST00000464313 DMRTC2Q8IXT2 367 aaPredicted RBP7.71□□□□□ -1.18
PTPN12-210ENST00000464313 SIX5Q8N196 739 aa7.71□□□□□ -1.18
PTPN12-210ENST00000464313 LARGE2Q8N3Y3 721 aa7.71□□□□□ -1.18
PTPN12-210ENST00000464313 NAGPAQ9UK23 515 aa7.71□□□□□ -1.18
PTPN12-210ENST00000464313 CHMP3Q9Y3E7 222 aa7.71□□□□□ -1.18
PTPN12-210ENST00000464313 LGR5O75473 907 aa7.7□□□□□ -1.18
PTPN12-210ENST00000464313 TAL1P17542 331 aaPredicted RBP7.7□□□□□ -1.18
PTPN12-210ENST00000464313 AFF1P51825 1210 aaKnown RBP7.7□□□□□ -1.18
PTPN12-210ENST00000464313 ELOAQ14241 798 aaKnown RBP7.7□□□□□ -1.18
PTPN12-210ENST00000464313 PSAPL1Q6NUJ1 521 aa7.7□□□□□ -1.18
PTPN12-210ENST00000464313 POTEAQ6S8J7 498 aa7.7□□□□□ -1.18
PTPN12-210ENST00000464313 SSBP4Q9BWG4 385 aaPredicted RBP7.7□□□□□ -1.18
PTPN12-210ENST00000464313 DNAJB12Q9NXW2 375 aaKnown RBP7.7□□□□□ -1.18
PTPN12-210ENST00000464313 USP21Q9UK80 565 aa7.7□□□□□ -1.18
PTPN12-210ENST00000464313 TMEM88BA6NKF7 163 aa7.69□□□□□ -1.18
PTPN12-210ENST00000464313 PPP1R12BO60237 982 aaPredicted RBP7.69□□□□□ -1.18
PTPN12-210ENST00000464313 BTLAQ7Z6A9 289 aa7.69□□□□□ -1.18
PTPN12-210ENST00000464313 FMR1NBQ8N0W7 255 aaPredicted RBP7.69□□□□□ -1.18
PTPN12-210ENST00000464313 TSEN2Q8NCE0 465 aaKnown RBP7.69□□□□□ -1.18
PTPN12-210ENST00000464313 FAM200AQ8TCP9 573 aa7.69□□□□□ -1.18
PTPN12-210ENST00000464313 C21orf2O43822 256 aa7.68□□□□□ -1.18
PTPN12-210ENST00000464313 ALDH16A1Q8IZ83 802 aa7.68□□□□□ -1.18
PTPN12-210ENST00000464313 NGLY1Q96IV0 654 aa7.68□□□□□ -1.18
PTPN12-210ENST00000464313 ILDR2Q71H61 639 aa7.67□□□□□ -1.18
PTPN12-210ENST00000464313 GSX2Q9BZM3 304 aa7.67□□□□□ -1.18
PTPN12-210ENST00000464313 RGS9O75916 674 aaPredicted RBP7.66□□□□□ -1.18
PTPN12-210ENST00000464313 NFKB1P19838 968 aa7.66□□□□□ -1.18
PTPN12-210ENST00000464313 SEC13P55735 322 aa7.66□□□□□ -1.18
PTPN12-210ENST00000464313 SLAIN2Q9P270 581 aa7.66□□□□□ -1.18
PTPN12-210ENST00000464313 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.66□□□□□ -1.18
PTPN12-210ENST00000464313 FAM69CQ0P6D2 419 aa7.65□□□□□ -1.18
PTPN12-210ENST00000464313 PNMA5Q96PV4 448 aa7.65□□□□□ -1.18
PTPN12-210ENST00000464313 USTQ9Y2C2 406 aa7.65□□□□□ -1.18
PTPN12-210ENST00000464313 RBM19Q9Y4C8 960 aaKnown RBP7.65□□□□□ -1.18
PTPN12-210ENST00000464313 ATAD2Q6PL18 1390 aa7.64□□□□□ -1.19
PTPN12-210ENST00000464313 M0R2N6 131 aa7.64□□□□□ -1.19
PTPN12-210ENST00000464313 SSTR4P31391 388 aa7.64□□□□□ -1.19
PTPN12-210ENST00000464313 IREB2P48200 963 aaKnown RBP7.64□□□□□ -1.19
PTPN12-210ENST00000464313 PLAURQ03405 335 aa7.64□□□□□ -1.19
PTPN12-210ENST00000464313 GAS2L2Q8NHY3 880 aa7.64□□□□□ -1.19
PTPN12-210ENST00000464313 CHMP7Q8WUX9 453 aaPredicted RBP7.64□□□□□ -1.19
PTPN12-210ENST00000464313 WFDC12Q8WWY7 111 aa7.64□□□□□ -1.19
PTPN12-210ENST00000464313 PDIA4P13667 645 aaKnown RBP7.63□□□□□ -1.19
PTPN12-210ENST00000464313 CPB1P15086 417 aa7.63□□□□□ -1.19
PTPN12-210ENST00000464313 NOS3P29474 1203 aa7.63□□□□□ -1.19
PTPN12-210ENST00000464313 CCINQ13939 588 aa7.63□□□□□ -1.19
PTPN12-210ENST00000464313 MSL1Q68DK7 614 aa7.63□□□□□ -1.19
PTPN12-210ENST00000464313 FAM35AQ86V20 835 aa7.63□□□□□ -1.19
PTPN12-210ENST00000464313 SCG3Q8WXD2 468 aaKnown RBP7.63□□□□□ -1.19
PTPN12-210ENST00000464313 C2orf49Q9BVC5 232 aaPredicted RBP7.63□□□□□ -1.19
PTPN12-210ENST00000464313 PRMT3O60678 531 aa7.62□□□□□ -1.19
PTPN12-210ENST00000464313 GRNP28799 593 aaKnown RBP7.62□□□□□ -1.19
PTPN12-210ENST00000464313 GRIK5Q16478 980 aa7.62□□□□□ -1.19
PTPN12-210ENST00000464313 HINFPQ9BQA5 517 aa7.62□□□□□ -1.19
PTPN12-210ENST00000464313 BCS1LQ9Y276 419 aa7.62□□□□□ -1.19
PTPN12-210ENST00000464313 MLLT1Q03111 559 aaPredicted RBP7.61□□□□□ -1.19
PTPN12-210ENST00000464313 KRT25Q7Z3Z0 450 aa7.61□□□□□ -1.19
PTPN12-210ENST00000464313 FBXO11Q86XK2 927 aa7.61□□□□□ -1.19
PTPN12-210ENST00000464313 MEGF10Q96KG7 1140 aa7.61□□□□□ -1.19
PTPN12-210ENST00000464313 PRIMPOLQ96LW4 560 aa7.61□□□□□ -1.19
PTPN12-210ENST00000464313 LPIN3Q9BQK8 851 aa7.61□□□□□ -1.19
PTPN12-210ENST00000464313 TRAIPQ9BWF2 469 aa7.61□□□□□ -1.19
PTPN12-210ENST00000464313 EFCC1Q9HA90 598 aa7.61□□□□□ -1.19
PTPN12-210ENST00000464313 OAS3Q9Y6K5 1087 aaKnown RBP7.61□□□□□ -1.19
PTPN12-210ENST00000464313 ZBTB42B2RXF5 422 aa7.6□□□□□ -1.19
PTPN12-210ENST00000464313 HIF1AQ16665 826 aa7.6□□□□□ -1.19
PTPN12-210ENST00000464313 SWI5Q1ZZU3 235 aa7.6□□□□□ -1.19
PTPN12-210ENST00000464313 PERM1Q5SV97 790 aa7.6□□□□□ -1.19
PTPN12-210ENST00000464313 STAG2Q8N3U4 1231 aa7.6□□□□□ -1.19
PTPN12-210ENST00000464313 CLP1Q92989 425 aaKnown RBP7.6□□□□□ -1.19
PTPN12-210ENST00000464313 DMGDHQ9UI17 866 aaKnown RBP7.6□□□□□ -1.19
PTPN12-210ENST00000464313 TGFBR3LH3BV60 316 aa7.59□□□□□ -1.19
PTPN12-210ENST00000464313 SCNN1AP37088 669 aa7.59□□□□□ -1.19
PTPN12-210ENST00000464313 CD97P48960 835 aa7.59□□□□□ -1.19
PTPN12-210ENST00000464313 JAG1P78504 1218 aa7.59□□□□□ -1.19
PTPN12-210ENST00000464313 IER5Q5VY09 327 aa7.59□□□□□ -1.19
PTPN12-210ENST00000464313 ZFATQ9P243 1243 aa7.59□□□□□ -1.19
PTPN12-210ENST00000464313 ATP2B4P23634 1241 aa7.58□□□□□ -1.2
PTPN12-210ENST00000464313 RTN1Q16799 776 aa7.58□□□□□ -1.2
PTPN12-210ENST00000464313 WFDC8Q8IUA0 241 aa7.58□□□□□ -1.2
PTPN12-210ENST00000464313 DTWD1Q8N5C7 304 aa7.58□□□□□ -1.2
PTPN12-210ENST00000464313 DEAF1O75398 565 aaPredicted RBP7.57□□□□□ -1.2
PTPN12-210ENST00000464313 TARSP26639 723 aaKnown RBP7.57□□□□□ -1.2
PTPN12-210ENST00000464313 GP2P55259 537 aaKnown RBP7.57□□□□□ -1.2
PTPN12-210ENST00000464313 OCLNQ16625 522 aa7.57□□□□□ -1.2
PTPN12-210ENST00000464313 PHLDB3Q6NSJ2 640 aa7.57□□□□□ -1.2
PTPN12-210ENST00000464313 ELMSAN1Q6PJG2 1045 aa7.57□□□□□ -1.2
PTPN12-210ENST00000464313 PRR23CQ6ZRP0 262 aa7.57□□□□□ -1.2
PTPN12-210ENST00000464313 SLC51AQ86UW1 340 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms