RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 PKDCCQ504Y2 493 aa8.63□□□□□ -1.03
CLSTN1-204ENST00000464286 CREBRFQ8IUR6 639 aa8.63□□□□□ -1.03
CLSTN1-204ENST00000464286 BEGAINQ9BUH8 593 aa8.63□□□□□ -1.03
CLSTN1-204ENST00000464286 PRDM4Q9UKN5 801 aa8.63□□□□□ -1.03
CLSTN1-204ENST00000464286 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.63□□□□□ -1.03
CLSTN1-204ENST00000464286 RGS12O14924 1447 aa8.63□□□□□ -1.03
CLSTN1-204ENST00000464286 RIMS2Q9UQ26 1411 aa8.63□□□□□ -1.03
CLSTN1-204ENST00000464286 ARHGEF10O15013 1369 aa8.62□□□□□ -1.03
CLSTN1-204ENST00000464286 CAVIN2O95810 425 aa8.62□□□□□ -1.03
CLSTN1-204ENST00000464286 JUNDP17535 347 aa8.62□□□□□ -1.03
CLSTN1-204ENST00000464286 SDSP20132 328 aa8.62□□□□□ -1.03
CLSTN1-204ENST00000464286 NEK4P51957 841 aa8.62□□□□□ -1.03
CLSTN1-204ENST00000464286 UBE2HP62256 183 aa8.62□□□□□ -1.03
CLSTN1-204ENST00000464286 FKBP5Q13451 457 aaPredicted RBP8.62□□□□□ -1.03
CLSTN1-204ENST00000464286 DHX8Q14562 1220 aaKnown RBP8.62□□□□□ -1.03
CLSTN1-204ENST00000464286 RETREG3Q86VR2 466 aa8.62□□□□□ -1.03
CLSTN1-204ENST00000464286 AEBP1Q8IUX7 1158 aa8.62□□□□□ -1.03
CLSTN1-204ENST00000464286 TMX3Q96JJ7 454 aa8.62□□□□□ -1.03
CLSTN1-204ENST00000464286 GGNBP2Q9H3C7 697 aa8.62□□□□□ -1.03
CLSTN1-204ENST00000464286 TMEM63CQ9P1W3 806 aa8.62□□□□□ -1.03
CLSTN1-204ENST00000464286 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.62□□□□□ -1.03
CLSTN1-204ENST00000464286 RTL1A6NKG5 1358 aa8.61□□□□□ -1.03
CLSTN1-204ENST00000464286 FAM187AA6NFU0 413 aa8.61□□□□□ -1.03
CLSTN1-204ENST00000464286 MX1P20591 662 aa8.61□□□□□ -1.03
CLSTN1-204ENST00000464286 SIRT2Q8IXJ6 389 aa8.61□□□□□ -1.03
CLSTN1-204ENST00000464286 SLC24A3Q9HC58 644 aa8.61□□□□□ -1.03
CLSTN1-204ENST00000464286 TOR4AQ9NXH8 423 aa8.61□□□□□ -1.03
CLSTN1-204ENST00000464286 PTPRMP28827 1452 aa8.61□□□□□ -1.03
CLSTN1-204ENST00000464286 EDC4Q6P2E9 1401 aaKnown RBP8.61□□□□□ -1.03
CLSTN1-204ENST00000464286 POGZQ7Z3K3 1410 aa8.61□□□□□ -1.03
CLSTN1-204ENST00000464286 MAP2P11137 1827 aaKnown RBP8.61□□□□□ -1.03
CLSTN1-204ENST00000464286 CACNA1FO60840 1977 aa8.61□□□□□ -1.03
CLSTN1-204ENST00000464286 ITSN1Q15811 1721 aa8.6□□□□□ -1.03
CLSTN1-204ENST00000464286 HTATSF1O43719 755 aaKnown RBP8.6□□□□□ -1.03
CLSTN1-204ENST00000464286 GNAI3P08754 354 aa8.6□□□□□ -1.03
CLSTN1-204ENST00000464286 GABPB1Q06547 395 aaPredicted RBP8.6□□□□□ -1.03
CLSTN1-204ENST00000464286 TRIM32Q13049 653 aa8.6□□□□□ -1.03
CLSTN1-204ENST00000464286 TMEM132EQ6IEE7 984 aa8.6□□□□□ -1.03
CLSTN1-204ENST00000464286 CEP85Q6P2H3 762 aa8.6□□□□□ -1.03
CLSTN1-204ENST00000464286 CCDC24Q8N4L8 307 aa8.6□□□□□ -1.03
CLSTN1-204ENST00000464286 ESYT1Q9BSJ8 1104 aa8.6□□□□□ -1.03
CLSTN1-204ENST00000464286 MBIPQ9NS73 344 aa8.6□□□□□ -1.03
CLSTN1-204ENST00000464286 PODXL2Q9NZ53 605 aa8.6□□□□□ -1.03
CLSTN1-204ENST00000464286 YTHDC2Q9H6S0 1430 aaKnown RBP8.6□□□□□ -1.03
CLSTN1-204ENST00000464286 ATP10DQ9P241 1426 aa8.6□□□□□ -1.03
CLSTN1-204ENST00000464286 DLG5Q8TDM6 1919 aa8.59□□□□□ -1.03
CLSTN1-204ENST00000464286 C6orf229H3BNL8 230 aa8.59□□□□□ -1.03
CLSTN1-204ENST00000464286 CCDC192P0DO97 292 aa8.59□□□□□ -1.03
CLSTN1-204ENST00000464286 PDE4DQ08499 809 aa8.59□□□□□ -1.03
CLSTN1-204ENST00000464286 ZSCAN31Q96LW9 406 aaPredicted RBP8.59□□□□□ -1.03
CLSTN1-204ENST00000464286 C1orf115Q9H7X2 142 aa8.59□□□□□ -1.03
CLSTN1-204ENST00000464286 CGNQ9P2M7 1197 aaKnown RBP8.59□□□□□ -1.03
CLSTN1-204ENST00000464286 ZDHHC9Q9Y397 364 aa8.59□□□□□ -1.03
CLSTN1-204ENST00000464286 PAXBP1Q9Y5B6 917 aa8.59□□□□□ -1.03
CLSTN1-204ENST00000464286 CD163L1Q9NR16 1453 aa8.58□□□□□ -1.04
CLSTN1-204ENST00000464286 KNDC1Q76NI1 1749 aa8.58□□□□□ -1.04
CLSTN1-204ENST00000464286 CCDC66A2RUB6 948 aa8.58□□□□□ -1.04
CLSTN1-204ENST00000464286 NEMFO60524 1076 aa8.58□□□□□ -1.04
CLSTN1-204ENST00000464286 ADCY5O95622 1261 aa8.58□□□□□ -1.04
CLSTN1-204ENST00000464286 GNAI2P04899 355 aa8.58□□□□□ -1.04
CLSTN1-204ENST00000464286 PDE1AP54750 535 aa8.58□□□□□ -1.04
CLSTN1-204ENST00000464286 RNF20Q5VTR2 975 aa8.58□□□□□ -1.04
CLSTN1-204ENST00000464286 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.58□□□□□ -1.04
CLSTN1-204ENST00000464286 ZGPATQ8N5A5 531 aaKnown RBP8.58□□□□□ -1.04
CLSTN1-204ENST00000464286 LRRCC1Q9C099 1032 aa8.58□□□□□ -1.04
CLSTN1-204ENST00000464286 OGFRQ9NZT2 677 aa8.58□□□□□ -1.04
CLSTN1-204ENST00000464286 HDAC5Q9UQL6 1122 aa8.58□□□□□ -1.04
CLSTN1-204ENST00000464286 NRKQ7Z2Y5 1582 aa8.57□□□□□ -1.04
CLSTN1-204ENST00000464286 KIF2AO00139 706 aaPredicted RBP8.57□□□□□ -1.04
CLSTN1-204ENST00000464286 WNT7AO00755 349 aa8.57□□□□□ -1.04
CLSTN1-204ENST00000464286 RAB11FIP3O75154 756 aa8.57□□□□□ -1.04
CLSTN1-204ENST00000464286 TUBB4AP04350 444 aa8.57□□□□□ -1.04
CLSTN1-204ENST00000464286 PDCP20941 246 aa8.57□□□□□ -1.04
CLSTN1-204ENST00000464286 IL13P35225 146 aa8.57□□□□□ -1.04
CLSTN1-204ENST00000464286 CYP4X1Q8N118 509 aa8.57□□□□□ -1.04
CLSTN1-204ENST00000464286 RNF214Q8ND24 703 aa8.57□□□□□ -1.04
CLSTN1-204ENST00000464286 RUFY2Q8WXA3 655 aa8.57□□□□□ -1.04
CLSTN1-204ENST00000464286 RTF1Q92541 710 aaKnown RBP8.57□□□□□ -1.04
CLSTN1-204ENST00000464286 SH2B1Q9NRF2 756 aaPredicted RBP8.57□□□□□ -1.04
CLSTN1-204ENST00000464286 POLKQ9UBT6 870 aa8.57□□□□□ -1.04
CLSTN1-204ENST00000464286 STAP2Q9UGK3 403 aa8.57□□□□□ -1.04
CLSTN1-204ENST00000464286 ARHGEF40Q8TER5 1519 aa8.57□□□□□ -1.04
CLSTN1-204ENST00000464286 NEO1Q92859 1461 aa8.57□□□□□ -1.04
CLSTN1-204ENST00000464286 TUBGCP6Q96RT7 1819 aa8.57□□□□□ -1.04
CLSTN1-204ENST00000464286 CCDC171Q6TFL3 1326 aa8.56□□□□□ -1.04
CLSTN1-204ENST00000464286 CFAP65Q6ZU64 1925 aaKnown RBP8.56□□□□□ -1.04
CLSTN1-204ENST00000464286 N4BP2Q86UW6 1770 aaPredicted RBP8.56□□□□□ -1.04
CLSTN1-204ENST00000464286 TMEM131LA2VDJ0 1609 aa8.56□□□□□ -1.04
CLSTN1-204ENST00000464286 SMTNL1A8MU46 457 aa8.56□□□□□ -1.04
CLSTN1-204ENST00000464286 ZSCAN22P10073 491 aaPredicted RBP8.56□□□□□ -1.04
CLSTN1-204ENST00000464286 ZSCAN20P17040 1043 aaPredicted RBP8.56□□□□□ -1.04
CLSTN1-204ENST00000464286 DIXDC1Q155Q3 683 aa8.56□□□□□ -1.04
CLSTN1-204ENST00000464286 HSP90AB4PQ58FF6 505 aa8.56□□□□□ -1.04
CLSTN1-204ENST00000464286 ZNF787Q6DD87 383 aa8.56□□□□□ -1.04
CLSTN1-204ENST00000464286 PTCRAQ6ISU1 281 aaPredicted RBP8.56□□□□□ -1.04
CLSTN1-204ENST00000464286 RSBN1LQ6PCB5 846 aaPredicted RBP8.56□□□□□ -1.04
CLSTN1-204ENST00000464286 USP48Q86UV5 1035 aa8.56□□□□□ -1.04
CLSTN1-204ENST00000464286 COG3Q96JB2 828 aa8.56□□□□□ -1.04
CLSTN1-204ENST00000464286 NUDT12Q9BQG2 462 aa8.56□□□□□ -1.04
CLSTN1-204ENST00000464286 CDK19Q9BWU1 502 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms