RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 SH3TC1Q8TE82 1336 aa17.76■□□□□ 0.43
COL5A1-205ENST00000464187 USP42Q9H9J4 1324 aaKnown RBP17.76■□□□□ 0.43
COL5A1-205ENST00000464187 EIF5BO60841 1220 aaKnown RBP17.76■□□□□ 0.43
COL5A1-205ENST00000464187 PTPN12Q05209 780 aaKnown RBP17.76■□□□□ 0.43
COL5A1-205ENST00000464187 TBC1D9BQ66K14 1250 aa17.76■□□□□ 0.43
COL5A1-205ENST00000464187 SIL1Q9H173 461 aa17.76■□□□□ 0.43
COL5A1-205ENST00000464187 IL1RAPL2Q9NP60 686 aa17.76■□□□□ 0.43
COL5A1-205ENST00000464187 COPRSQ9NQ92 184 aa17.76■□□□□ 0.43
COL5A1-205ENST00000464187 NTSR2O95665 410 aa17.75■□□□□ 0.43
COL5A1-205ENST00000464187 SSFA2P28290 1259 aa17.75■□□□□ 0.43
COL5A1-205ENST00000464187 G3BP1Q13283 466 aaKnown RBP eCLIP17.75■□□□□ 0.43
COL5A1-205ENST00000464187 BICDL1Q6ZP65 573 aa17.75■□□□□ 0.43
COL5A1-205ENST00000464187 SCN7AQ01118 1682 aa17.75■□□□□ 0.43
COL5A1-205ENST00000464187 CSF1RP07333 972 aa17.75■□□□□ 0.43
COL5A1-205ENST00000464187 ERC1Q8IUD2 1116 aa17.75■□□□□ 0.43
COL5A1-205ENST00000464187 TNS1Q9HBL0 1735 aaKnown RBP17.73■□□□□ 0.43
COL5A1-205ENST00000464187 PDE8AO60658 829 aa17.73■□□□□ 0.43
COL5A1-205ENST00000464187 CTSWP56202 376 aa17.73■□□□□ 0.43
COL5A1-205ENST00000464187 TTLL11Q8NHH1 800 aa17.73■□□□□ 0.43
COL5A1-205ENST00000464187 CCDC85AQ96PX6 553 aaPredicted RBP17.73■□□□□ 0.43
COL5A1-205ENST00000464187 SETDB2Q96T68 719 aa17.73■□□□□ 0.43
COL5A1-205ENST00000464187 HCLS1P14317 486 aaPredicted RBP17.72■□□□□ 0.43
COL5A1-205ENST00000464187 ZNF827Q17R98 1081 aa17.72■□□□□ 0.43
COL5A1-205ENST00000464187 CCDC57Q2TAC2 916 aa17.72■□□□□ 0.43
COL5A1-205ENST00000464187 NUTM1Q86Y26 1132 aa17.72■□□□□ 0.43
COL5A1-205ENST00000464187 TFCP2L1Q9NZI6 479 aa17.72■□□□□ 0.43
COL5A1-205ENST00000464187 SASH1O94885 1247 aa17.72■□□□□ 0.43
COL5A1-205ENST00000464187 CD2BP2O95400 341 aaKnown RBP17.72■□□□□ 0.43
COL5A1-205ENST00000464187 CASC1Q6TDU7 716 aa17.72■□□□□ 0.43
COL5A1-205ENST00000464187 AKT1S1Q96B36 256 aa17.72■□□□□ 0.43
COL5A1-205ENST00000464187 USP26Q9BXU7 913 aa17.72■□□□□ 0.43
COL5A1-205ENST00000464187 CHMP5Q9NZZ3 219 aa17.72■□□□□ 0.43
COL5A1-205ENST00000464187 UBR3Q6ZT12 1888 aa17.71■□□□□ 0.43
COL5A1-205ENST00000464187 MX1P20591 662 aa17.71■□□□□ 0.43
COL5A1-205ENST00000464187 TSHZ3Q63HK5 1081 aa17.71■□□□□ 0.43
COL5A1-205ENST00000464187 DDIT3P35638 169 aa17.7■□□□□ 0.42
COL5A1-205ENST00000464187 EN1Q05925 392 aaPredicted RBP17.7■□□□□ 0.42
COL5A1-205ENST00000464187 IFIT5Q13325 482 aaKnown RBP17.7■□□□□ 0.42
COL5A1-205ENST00000464187 GSE1Q14687 1217 aa17.7■□□□□ 0.42
COL5A1-205ENST00000464187 CLASRPQ8N2M8 674 aaKnown RBP17.7■□□□□ 0.42
COL5A1-205ENST00000464187 GREM2Q9H772 168 aa17.7■□□□□ 0.42
COL5A1-205ENST00000464187 C4AP0C0L4 1744 aa17.7■□□□□ 0.42
COL5A1-205ENST00000464187 HSP90B1P14625 803 aaKnown RBP17.7■□□□□ 0.42
COL5A1-205ENST00000464187 EZH2Q15910 746 aaKnown RBP17.7■□□□□ 0.42
COL5A1-205ENST00000464187 ZNF594Q96JF6 807 aaPredicted RBP17.7■□□□□ 0.42
COL5A1-205ENST00000464187 CAMKK2Q96RR4 588 aa17.7■□□□□ 0.42
COL5A1-205ENST00000464187 STAP2Q9UGK3 403 aa17.7■□□□□ 0.42
COL5A1-205ENST00000464187 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.7■□□□□ 0.42
COL5A1-205ENST00000464187 GYS1P13807 737 aa17.69■□□□□ 0.42
COL5A1-205ENST00000464187 ITGA6P23229 1130 aa17.69■□□□□ 0.42
COL5A1-205ENST00000464187 ERFEQ4G0M1 354 aa17.69■□□□□ 0.42
COL5A1-205ENST00000464187 NYXQ9GZU5 481 aa17.69■□□□□ 0.42
COL5A1-205ENST00000464187 GTF2E1P29083 439 aaPredicted RBP17.68■□□□□ 0.42
COL5A1-205ENST00000464187 SF3B2Q13435 895 aaKnown RBP17.68■□□□□ 0.42
COL5A1-205ENST00000464187 NBPF5PQ86XG9 351 aaPredicted RBP17.68■□□□□ 0.42
COL5A1-205ENST00000464187 K7ELQ4 463 aaPredicted RBP17.68■□□□□ 0.42
COL5A1-205ENST00000464187 NFIXQ14938 502 aa17.68■□□□□ 0.42
COL5A1-205ENST00000464187 TAF7LQ5H9L4 462 aa17.68■□□□□ 0.42
COL5A1-205ENST00000464187 AOX1Q06278 1338 aa17.67■□□□□ 0.42
COL5A1-205ENST00000464187 RGPD3A6NKT7 1758 aaPredicted RBP17.67■□□□□ 0.42
COL5A1-205ENST00000464187 RGPD4Q7Z3J3 1758 aa17.67■□□□□ 0.42
COL5A1-205ENST00000464187 ANKRD18BA2A2Z9 1011 aa17.67■□□□□ 0.42
COL5A1-205ENST00000464187 EYA2O00167 538 aa17.67■□□□□ 0.42
COL5A1-205ENST00000464187 ERC2O15083 957 aa17.67■□□□□ 0.42
COL5A1-205ENST00000464187 RABEP1Q15276 862 aa17.67■□□□□ 0.42
COL5A1-205ENST00000464187 LRRC24Q50LG9 513 aa17.67■□□□□ 0.42
COL5A1-205ENST00000464187 TPTE2Q6XPS3 522 aa17.67■□□□□ 0.42
COL5A1-205ENST00000464187 ATG9AQ7Z3C6 839 aa17.67■□□□□ 0.42
COL5A1-205ENST00000464187 CIAO1O76071 339 aa17.66■□□□□ 0.42
COL5A1-205ENST00000464187 TFCP2Q12800 502 aa17.66■□□□□ 0.42
COL5A1-205ENST00000464187 AACSQ86V21 672 aa17.66■□□□□ 0.42
COL5A1-205ENST00000464187 EAF2Q96CJ1 260 aaPredicted RBP17.66■□□□□ 0.42
COL5A1-205ENST00000464187 PUS3Q9BZE2 481 aaKnown RBP17.66■□□□□ 0.42
COL5A1-205ENST00000464187 CARMIL3Q8ND23 1372 aa17.66■□□□□ 0.42
COL5A1-205ENST00000464187 REC8O95072 547 aa17.65■□□□□ 0.42
COL5A1-205ENST00000464187 IL15P40933 162 aaPredicted RBP17.65■□□□□ 0.42
COL5A1-205ENST00000464187 CCDC152Q4G0S7 254 aa17.65■□□□□ 0.42
COL5A1-205ENST00000464187 COL23A1Q86Y22 540 aaPredicted RBP17.65■□□□□ 0.42
COL5A1-205ENST00000464187 FBXO3Q9UK99 471 aa17.65■□□□□ 0.42
COL5A1-205ENST00000464187 IFIT2P09913 472 aaKnown RBP17.65■□□□□ 0.42
COL5A1-205ENST00000464187 BAG6P46379 1132 aa17.65■□□□□ 0.42
COL5A1-205ENST00000464187 SLC10A5Q5PT55 438 aa17.65■□□□□ 0.42
COL5A1-205ENST00000464187 FLAD1Q8NFF5 587 aa17.65■□□□□ 0.42
COL5A1-205ENST00000464187 ABCC12Q96J65 1359 aa17.65■□□□□ 0.42
COL5A1-205ENST00000464187 DEFB132Q7Z7B7 95 aa17.64■□□□□ 0.41
COL5A1-205ENST00000464187 COL24A1Q17RW2 1714 aa17.63■□□□□ 0.41
COL5A1-205ENST00000464187 NPHP1O15259 732 aa17.63■□□□□ 0.41
COL5A1-205ENST00000464187 LDHAL6AQ6ZMR3 332 aa17.63■□□□□ 0.41
COL5A1-205ENST00000464187 CCDC8Q9H0W5 538 aaPredicted RBP17.63■□□□□ 0.41
COL5A1-205ENST00000464187 ANO8Q9HCE9 1232 aaPredicted RBP17.63■□□□□ 0.41
COL5A1-205ENST00000464187 CIZ1Q9ULV3 898 aaPredicted RBP17.63■□□□□ 0.41
COL5A1-205ENST00000464187 MYH3P11055 1940 aa17.63■□□□□ 0.41
COL5A1-205ENST00000464187 PNPLA7Q6ZV29 1317 aa17.63■□□□□ 0.41
COL5A1-205ENST00000464187 TM4SF1P30408 202 aa17.63■□□□□ 0.41
COL5A1-205ENST00000464187 SF3B3Q15393 1217 aaKnown RBP17.63■□□□□ 0.41
COL5A1-205ENST00000464187 TNNI3KQ59H18 835 aa17.63■□□□□ 0.41
COL5A1-205ENST00000464187 C3orf67Q6ZVT6 689 aa17.63■□□□□ 0.41
COL5A1-205ENST00000464187 CCDC24Q8N4L8 307 aa17.63■□□□□ 0.41
COL5A1-205ENST00000464187 ESYT1Q9BSJ8 1104 aa17.63■□□□□ 0.41
COL5A1-205ENST00000464187 SEC31BQ9NQW1 1179 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms