RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 SPATA31A7Q8IWB4 1347 aa10.43□□□□□ -0.74
SHQ1-203ENST00000463369 DISP2A7MBM2 1401 aa10.43□□□□□ -0.74
SHQ1-203ENST00000463369 MCCP23508 829 aa10.43□□□□□ -0.74
SHQ1-203ENST00000463369 OS9Q13438 667 aaPredicted RBP10.43□□□□□ -0.74
SHQ1-203ENST00000463369 FKBP5Q13451 457 aaPredicted RBP10.43□□□□□ -0.74
SHQ1-203ENST00000463369 AKAP4Q5JQC9 854 aa10.43□□□□□ -0.74
SHQ1-203ENST00000463369 ANKRD45Q5TZF3 282 aa10.43□□□□□ -0.74
SHQ1-203ENST00000463369 GCC1Q96CN9 775 aa10.43□□□□□ -0.74
SHQ1-203ENST00000463369 TSPY26PQ9H489 355 aa10.43□□□□□ -0.74
SHQ1-203ENST00000463369 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.43□□□□□ -0.74
SHQ1-203ENST00000463369 SPG7Q9UQ90 795 aa10.43□□□□□ -0.74
SHQ1-203ENST00000463369 THRAP3Q9Y2W1 955 aaKnown RBP10.43□□□□□ -0.74
SHQ1-203ENST00000463369 ITGB4P16144 1822 aa10.43□□□□□ -0.74
SHQ1-203ENST00000463369 MAP3K5Q99683 1374 aa10.43□□□□□ -0.74
SHQ1-203ENST00000463369 CDC45O75419 566 aa10.42□□□□□ -0.74
SHQ1-203ENST00000463369 EXOSC9Q06265 439 aaKnown RBP10.42□□□□□ -0.74
SHQ1-203ENST00000463369 VPS72Q15906 364 aa10.42□□□□□ -0.74
SHQ1-203ENST00000463369 ZNF530Q6P9A1 599 aaPredicted RBP10.42□□□□□ -0.74
SHQ1-203ENST00000463369 NME8Q8N427 588 aa10.42□□□□□ -0.74
SHQ1-203ENST00000463369 USP21Q9UK80 565 aa10.42□□□□□ -0.74
SHQ1-203ENST00000463369 FAM177BA6PVY3 158 aa10.42□□□□□ -0.74
SHQ1-203ENST00000463369 DCAF8Q5TAQ9 597 aa10.42□□□□□ -0.74
SHQ1-203ENST00000463369 ANKRD7Q92527 254 aa10.42□□□□□ -0.74
SHQ1-203ENST00000463369 RTF1Q92541 710 aaKnown RBP10.42□□□□□ -0.74
SHQ1-203ENST00000463369 TSR2Q969E8 191 aaKnown RBP10.42□□□□□ -0.74
SHQ1-203ENST00000463369 FEZ1Q99689 392 aa10.42□□□□□ -0.74
SHQ1-203ENST00000463369 CHMP4BQ9H444 224 aaKnown RBP10.42□□□□□ -0.74
SHQ1-203ENST00000463369 CACNA1FO60840 1977 aa10.41□□□□□ -0.74
SHQ1-203ENST00000463369 IPO8O15397 1037 aaKnown RBP10.41□□□□□ -0.74
SHQ1-203ENST00000463369 DCTN1Q14203 1278 aa10.41□□□□□ -0.74
SHQ1-203ENST00000463369 UVSSAQ2YD98 709 aa10.41□□□□□ -0.74
SHQ1-203ENST00000463369 C1orf141Q5JVX7 400 aa10.41□□□□□ -0.74
SHQ1-203ENST00000463369 MCM10Q7L590 875 aa10.41□□□□□ -0.74
SHQ1-203ENST00000463369 ZNF830Q96NB3 372 aaPredicted RBP10.41□□□□□ -0.74
SHQ1-203ENST00000463369 KDM3BQ7LBC6 1761 aa10.41□□□□□ -0.74
SHQ1-203ENST00000463369 ZGPATQ8N5A5 531 aaKnown RBP10.4□□□□□ -0.74
SHQ1-203ENST00000463369 IL17REQ8NFR9 667 aa10.4□□□□□ -0.74
SHQ1-203ENST00000463369 ZCRB1Q8TBF4 217 aaKnown RBP10.4□□□□□ -0.74
SHQ1-203ENST00000463369 THUMPD2Q9BTF0 503 aaKnown RBP10.4□□□□□ -0.74
SHQ1-203ENST00000463369 AFF2P51816 1311 aa10.4□□□□□ -0.74
SHQ1-203ENST00000463369 CEMIPQ8WUJ3 1361 aa10.4□□□□□ -0.74
SHQ1-203ENST00000463369 U2AF2P26368 475 aaKnown RBP eCLIP10.4□□□□□ -0.75
SHQ1-203ENST00000463369 IFNL2Q8IZJ0 200 aa10.4□□□□□ -0.75
SHQ1-203ENST00000463369 MORC4Q8TE76 937 aa10.4□□□□□ -0.75
SHQ1-203ENST00000463369 USP26Q9BXU7 913 aa10.4□□□□□ -0.75
SHQ1-203ENST00000463369 SNRKQ9NRH2 765 aa10.4□□□□□ -0.75
SHQ1-203ENST00000463369 GLI3P10071 1580 aa10.4□□□□□ -0.75
SHQ1-203ENST00000463369 TOGARAM1Q9Y4F4 1720 aa10.39□□□□□ -0.75
SHQ1-203ENST00000463369 CYP27B1O15528 508 aa10.39□□□□□ -0.75
SHQ1-203ENST00000463369 PARNO95453 639 aaKnown RBP10.39□□□□□ -0.75
SHQ1-203ENST00000463369 ZNF853P0CG23 659 aa10.39□□□□□ -0.75
SHQ1-203ENST00000463369 PHKG2P15735 406 aa10.39□□□□□ -0.75
SHQ1-203ENST00000463369 NUBP1P53384 320 aa10.39□□□□□ -0.75
SHQ1-203ENST00000463369 GNAI1P63096 354 aa10.39□□□□□ -0.75
SHQ1-203ENST00000463369 FAM184AQ8NB25 1140 aa10.39□□□□□ -0.75
SHQ1-203ENST00000463369 VRTNQ9H8Y1 702 aa10.39□□□□□ -0.75
SHQ1-203ENST00000463369 DIAPH3Q9NSV4 1193 aa10.39□□□□□ -0.75
SHQ1-203ENST00000463369 IFT57Q9NWB7 429 aa10.39□□□□□ -0.75
SHQ1-203ENST00000463369 OGFRQ9NZT2 677 aa10.39□□□□□ -0.75
SHQ1-203ENST00000463369 CGNQ9P2M7 1197 aaKnown RBP10.39□□□□□ -0.75
SHQ1-203ENST00000463369 PCDH11XQ9BZA7 1347 aa10.39□□□□□ -0.75
SHQ1-203ENST00000463369 PCDH11YQ9BZA8 1340 aa10.39□□□□□ -0.75
SHQ1-203ENST00000463369 THSD7AQ9UPZ6 1657 aa10.39□□□□□ -0.75
SHQ1-203ENST00000463369 ATRNO75882 1429 aa10.39□□□□□ -0.75
SHQ1-203ENST00000463369 CTIFO43310 598 aaKnown RBP10.38□□□□□ -0.75
SHQ1-203ENST00000463369 MCCD1P59942 119 aaPredicted RBP10.38□□□□□ -0.75
SHQ1-203ENST00000463369 ZNF771Q7L3S4 317 aaPredicted RBP10.38□□□□□ -0.75
SHQ1-203ENST00000463369 OXER1Q8TDS5 423 aa10.38□□□□□ -0.75
SHQ1-203ENST00000463369 GIPC2Q8TF65 315 aa10.38□□□□□ -0.75
SHQ1-203ENST00000463369 SYAP1Q96A49 352 aaPredicted RBP10.38□□□□□ -0.75
SHQ1-203ENST00000463369 CHAMP1Q96JM3 812 aa10.38□□□□□ -0.75
SHQ1-203ENST00000463369 TTC12Q9H892 705 aaPredicted RBP10.38□□□□□ -0.75
SHQ1-203ENST00000463369 LGR6Q9HBX8 967 aa10.38□□□□□ -0.75
SHQ1-203ENST00000463369 BRWD3Q6RI45 1802 aa10.38□□□□□ -0.75
SHQ1-203ENST00000463369 RNMTO43148 476 aaKnown RBP10.38□□□□□ -0.75
SHQ1-203ENST00000463369 ST18O60284 1047 aa10.38□□□□□ -0.75
SHQ1-203ENST00000463369 MPRIPQ6WCQ1 1025 aa10.38□□□□□ -0.75
SHQ1-203ENST00000463369 C17orf53Q8N3J3 647 aaPredicted RBP10.38□□□□□ -0.75
SHQ1-203ENST00000463369 EXOC5O00471 708 aa10.37□□□□□ -0.75
SHQ1-203ENST00000463369 CHRM1P11229 460 aaPredicted RBP10.37□□□□□ -0.75
SHQ1-203ENST00000463369 GABPB1Q06547 395 aaPredicted RBP10.37□□□□□ -0.75
SHQ1-203ENST00000463369 SF3A1Q15459 793 aaKnown RBP10.37□□□□□ -0.75
SHQ1-203ENST00000463369 MPNDQ8N594 471 aa10.37□□□□□ -0.75
SHQ1-203ENST00000463369 TRPC5Q9UL62 973 aaPredicted RBP10.37□□□□□ -0.75
SHQ1-203ENST00000463369 KDM6AO15550 1401 aaPredicted RBP10.37□□□□□ -0.75
SHQ1-203ENST00000463369 TNS2Q63HR2 1409 aa10.37□□□□□ -0.75
SHQ1-203ENST00000463369 SBF2Q86WG5 1849 aa10.37□□□□□ -0.75
SHQ1-203ENST00000463369 CHL1O00533 1208 aa10.37□□□□□ -0.75
SHQ1-203ENST00000463369 ZBTB7BO15156 539 aaPredicted RBP10.37□□□□□ -0.75
SHQ1-203ENST00000463369 PPFIA4O75335 1185 aa10.37□□□□□ -0.75
SHQ1-203ENST00000463369 PPP1R37O75864 691 aa10.37□□□□□ -0.75
SHQ1-203ENST00000463369 PHF14O94880 888 aa10.37□□□□□ -0.75
SHQ1-203ENST00000463369 GSPT1P15170 499 aaKnown RBP10.37□□□□□ -0.75
SHQ1-203ENST00000463369 TTLL12Q14166 644 aaPredicted RBP10.37□□□□□ -0.75
SHQ1-203ENST00000463369 DCAF5Q96JK2 942 aa10.37□□□□□ -0.75
SHQ1-203ENST00000463369 GJD4Q96KN9 370 aaPredicted RBP10.37□□□□□ -0.75
SHQ1-203ENST00000463369 BABAM1Q9NWV8 329 aa10.37□□□□□ -0.75
SHQ1-203ENST00000463369 DOT1LQ8TEK3 1739 aa10.36□□□□□ -0.75
SHQ1-203ENST00000463369 MRC1P22897 1456 aa10.36□□□□□ -0.75
SHQ1-203ENST00000463369 SPDYE2BA6NHP3 402 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 322.4 ms