RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 SEC31BQ9NQW1 1179 aa11.03□□□□□ -0.64
TMEM254-208ENST00000463209 E9PSI1 815 aa11.02□□□□□ -0.65
TMEM254-208ENST00000463209 PCCAP05165 728 aaPredicted RBP11.02□□□□□ -0.65
TMEM254-208ENST00000463209 IARSP41252 1262 aaKnown RBP11.02□□□□□ -0.65
TMEM254-208ENST00000463209 TRIM28Q13263 835 aaKnown RBP11.02□□□□□ -0.65
TMEM254-208ENST00000463209 GRAPQ13588 217 aa11.02□□□□□ -0.65
TMEM254-208ENST00000463209 UBE3BQ7Z3V4 1068 aa11.02□□□□□ -0.65
TMEM254-208ENST00000463209 RTKN2Q8IZC4 609 aa11.02□□□□□ -0.65
TMEM254-208ENST00000463209 CCDC191Q8NCU4 936 aa11.02□□□□□ -0.65
TMEM254-208ENST00000463209 GRAPLQ8TC17 118 aaPredicted RBP11.02□□□□□ -0.65
TMEM254-208ENST00000463209 KDM2BQ8NHM5 1336 aa11.02□□□□□ -0.65
TMEM254-208ENST00000463209 MYH3P11055 1940 aa11.01□□□□□ -0.65
TMEM254-208ENST00000463209 CACNA1FO60840 1977 aa11.01□□□□□ -0.65
TMEM254-208ENST00000463209 DDNO94850 711 aaPredicted RBP11.01□□□□□ -0.65
TMEM254-208ENST00000463209 NEXNQ0ZGT2 675 aa11.01□□□□□ -0.65
TMEM254-208ENST00000463209 AOC3Q16853 763 aa11.01□□□□□ -0.65
TMEM254-208ENST00000463209 DNAAF4Q8WXU2 420 aa11.01□□□□□ -0.65
TMEM254-208ENST00000463209 GPR101Q96P66 508 aaPredicted RBP11.01□□□□□ -0.65
TMEM254-208ENST00000463209 ATP6V0A2Q9Y487 856 aa11.01□□□□□ -0.65
TMEM254-208ENST00000463209 LTBP1Q14766 1721 aa11.01□□□□□ -0.65
TMEM254-208ENST00000463209 WDR90Q96KV7 1748 aa11.01□□□□□ -0.65
TMEM254-208ENST00000463209 GLTPD2A6NH11 291 aa11□□□□□ -0.65
TMEM254-208ENST00000463209 GCKRQ14397 625 aa11□□□□□ -0.65
TMEM254-208ENST00000463209 SF3B3Q15393 1217 aaKnown RBP11□□□□□ -0.65
TMEM254-208ENST00000463209 MRPL50Q8N5N7 158 aaKnown RBP11□□□□□ -0.65
TMEM254-208ENST00000463209 SSH1Q8WYL5 1049 aa11□□□□□ -0.65
TMEM254-208ENST00000463209 CHMP4AQ9BY43 222 aa11□□□□□ -0.65
TMEM254-208ENST00000463209 PPIP5K2O43314 1243 aa10.99□□□□□ -0.65
TMEM254-208ENST00000463209 GPSM2P81274 684 aa10.99□□□□□ -0.65
TMEM254-208ENST00000463209 SLC4A10Q6U841 1118 aa10.99□□□□□ -0.65
TMEM254-208ENST00000463209 DPP8Q6V1X1 898 aaPredicted RBP10.99□□□□□ -0.65
TMEM254-208ENST00000463209 LARGE2Q8N3Y3 721 aa10.99□□□□□ -0.65
TMEM254-208ENST00000463209 PSMD1Q99460 953 aa10.99□□□□□ -0.65
TMEM254-208ENST00000463209 POTECB2RU33 542 aa10.98□□□□□ -0.65
TMEM254-208ENST00000463209 H7C1W4 665 aa10.98□□□□□ -0.65
TMEM254-208ENST00000463209 PDE8AO60658 829 aa10.98□□□□□ -0.65
TMEM254-208ENST00000463209 BBOX1O75936 387 aa10.98□□□□□ -0.65
TMEM254-208ENST00000463209 CASP7P55210 303 aa10.98□□□□□ -0.65
TMEM254-208ENST00000463209 CTSWP56202 376 aa10.98□□□□□ -0.65
TMEM254-208ENST00000463209 HNRNPUQ00839 825 aaKnown RBP eCLIP10.98□□□□□ -0.65
TMEM254-208ENST00000463209 BEND3Q5T5X7 828 aa10.98□□□□□ -0.65
TMEM254-208ENST00000463209 SP8Q8IXZ3 490 aa10.98□□□□□ -0.65
TMEM254-208ENST00000463209 MPNDQ8N594 471 aa10.98□□□□□ -0.65
TMEM254-208ENST00000463209 GREM2Q9H772 168 aa10.98□□□□□ -0.65
TMEM254-208ENST00000463209 CDHR2Q9BYE9 1310 aa10.98□□□□□ -0.65
TMEM254-208ENST00000463209 ZC3H4Q9UPT8 1303 aaKnown RBP10.98□□□□□ -0.65
TMEM254-208ENST00000463209 RIMBP2O15034 1052 aa10.97□□□□□ -0.65
TMEM254-208ENST00000463209 POTEIP0CG38 1075 aa10.97□□□□□ -0.65
TMEM254-208ENST00000463209 POTEJP0CG39 1038 aa10.97□□□□□ -0.65
TMEM254-208ENST00000463209 FAM161AQ3B820 660 aa10.97□□□□□ -0.65
TMEM254-208ENST00000463209 CCDC152Q4G0S7 254 aa10.97□□□□□ -0.65
TMEM254-208ENST00000463209 CC2D2BQ6DHV5 1058 aa10.97□□□□□ -0.65
TMEM254-208ENST00000463209 C16orf71Q8IYS4 520 aaPredicted RBP10.97□□□□□ -0.65
TMEM254-208ENST00000463209 TRMT2AQ8IZ69 625 aaKnown RBP10.97□□□□□ -0.65
TMEM254-208ENST00000463209 LINS1Q8NG48 757 aa10.97□□□□□ -0.65
TMEM254-208ENST00000463209 TMX4Q9H1E5 349 aaPredicted RBP10.97□□□□□ -0.65
TMEM254-208ENST00000463209 NSFL1CQ9UNZ2 370 aaKnown RBP10.97□□□□□ -0.65
TMEM254-208ENST00000463209 GJA3Q9Y6H8 435 aa10.97□□□□□ -0.65
TMEM254-208ENST00000463209 WTIPA6NIX2 430 aaPredicted RBP10.96□□□□□ -0.65
TMEM254-208ENST00000463209 RPS8P62241 208 aaKnown RBP10.96□□□□□ -0.65
TMEM254-208ENST00000463209 EPHA10Q5JZY3 1008 aa10.96□□□□□ -0.65
TMEM254-208ENST00000463209 DPY19L2Q6NUT2 758 aa10.96□□□□□ -0.65
TMEM254-208ENST00000463209 NIM1KQ8IY84 436 aa10.96□□□□□ -0.65
TMEM254-208ENST00000463209 TTLL11Q8NHH1 800 aa10.96□□□□□ -0.65
TMEM254-208ENST00000463209 JDP2Q8WYK2 163 aa10.96□□□□□ -0.65
TMEM254-208ENST00000463209 SMC4Q9NTJ3 1288 aa10.96□□□□□ -0.65
TMEM254-208ENST00000463209 A0A1B0GUL6 1792 aa10.95□□□□□ -0.66
TMEM254-208ENST00000463209 C6orf229H3BNL8 230 aa10.95□□□□□ -0.66
TMEM254-208ENST00000463209 FZD9O00144 591 aa10.95□□□□□ -0.66
TMEM254-208ENST00000463209 TOMM70O94826 608 aa10.95□□□□□ -0.66
TMEM254-208ENST00000463209 HTRA3P83110 453 aa10.95□□□□□ -0.66
TMEM254-208ENST00000463209 RTFDC1Q9BY42 306 aaPredicted RBP10.95□□□□□ -0.66
TMEM254-208ENST00000463209 POLLQ9UGP5 575 aa10.95□□□□□ -0.66
TMEM254-208ENST00000463209 CHMP3Q9Y3E7 222 aa10.95□□□□□ -0.66
TMEM254-208ENST00000463209 RAD17O75943 681 aa10.94□□□□□ -0.66
TMEM254-208ENST00000463209 UFL1O94874 794 aa10.94□□□□□ -0.66
TMEM254-208ENST00000463209 VEGFAP15692 232 aaPredicted RBP10.94□□□□□ -0.66
TMEM254-208ENST00000463209 FOXO4P98177 505 aa10.94□□□□□ -0.66
TMEM254-208ENST00000463209 DOK7Q18PE1 504 aa10.94□□□□□ -0.66
TMEM254-208ENST00000463209 ANKRD18AQ8IVF6 992 aa10.94□□□□□ -0.66
TMEM254-208ENST00000463209 SRCIN1Q9C0H9 1055 aa10.94□□□□□ -0.66
TMEM254-208ENST00000463209 DBNDD1Q9H9R9 158 aa10.94□□□□□ -0.66
TMEM254-208ENST00000463209 SCN4AP35499 1836 aa10.93□□□□□ -0.66
TMEM254-208ENST00000463209 YDJCA8MPS7 323 aa10.93□□□□□ -0.66
TMEM254-208ENST00000463209 GRM8O00222 908 aa10.93□□□□□ -0.66
TMEM254-208ENST00000463209 NBPF7P0C2Y1 421 aaPredicted RBP10.93□□□□□ -0.66
TMEM254-208ENST00000463209 HSP90B1P14625 803 aaKnown RBP10.93□□□□□ -0.66
TMEM254-208ENST00000463209 ITGA6P23229 1130 aa10.93□□□□□ -0.66
TMEM254-208ENST00000463209 EIF6P56537 245 aaKnown RBP10.93□□□□□ -0.66
TMEM254-208ENST00000463209 KIAA2012Q0VF49 1180 aa10.93□□□□□ -0.66
TMEM254-208ENST00000463209 EAPPQ56P03 285 aaPredicted RBP10.93□□□□□ -0.66
TMEM254-208ENST00000463209 SUPT20HQ8NEM7 779 aa10.93□□□□□ -0.66
TMEM254-208ENST00000463209 TBC1D16Q8TBP0 767 aa10.93□□□□□ -0.66
TMEM254-208ENST00000463209 RBM46Q8TBY0 533 aaKnown RBP10.93□□□□□ -0.66
TMEM254-208ENST00000463209 SUCLG2Q96I99 432 aa10.93□□□□□ -0.66
TMEM254-208ENST00000463209 KCNQ5Q9NR82 932 aa10.93□□□□□ -0.66
TMEM254-208ENST00000463209 C9orf78Q9NZ63 289 aaPredicted RBP10.93□□□□□ -0.66
TMEM254-208ENST00000463209 ANKIB1Q9P2G1 1089 aa10.93□□□□□ -0.66
TMEM254-208ENST00000463209 NOB1Q9ULX3 412 aaKnown RBP10.93□□□□□ -0.66
TMEM254-208ENST00000463209 TNNQ9UQP3 1299 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms