RNA–Protein interactions for RNA: ENST00000463197.1

CCR9-205, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 4

Gene CCR9, Length 349 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-205ENST00000463197 CLEC11AQ9Y240 323 aa7.44□□□□□ -1.22
CCR9-205ENST00000463197 RASSF10A6NK89 507 aa7.43□□□□□ -1.22
CCR9-205ENST00000463197 PPIP5K2O43314 1243 aa7.43□□□□□ -1.22
CCR9-205ENST00000463197 CAPN15O75808 1086 aa7.43□□□□□ -1.22
CCR9-205ENST00000463197 BBOX1O75936 387 aa7.43□□□□□ -1.22
CCR9-205ENST00000463197 GMPSP49915 693 aaPredicted RBP7.43□□□□□ -1.22
CCR9-205ENST00000463197 SF3B3Q15393 1217 aaKnown RBP7.43□□□□□ -1.22
CCR9-205ENST00000463197 HDGFL1Q5TGJ6 251 aa7.43□□□□□ -1.22
CCR9-205ENST00000463197 JDP2Q8WYK2 163 aa7.43□□□□□ -1.22
CCR9-205ENST00000463197 SEC31BQ9NQW1 1179 aa7.43□□□□□ -1.22
CCR9-205ENST00000463197 GPRC5DQ9NZD1 345 aa7.43□□□□□ -1.22
CCR9-205ENST00000463197 PGAP2Q9UHJ9 254 aa7.43□□□□□ -1.22
CCR9-205ENST00000463197 ZBTB12Q9Y330 459 aaPredicted RBP7.43□□□□□ -1.22
CCR9-205ENST00000463197 RAD17O75943 681 aa7.42□□□□□ -1.22
CCR9-205ENST00000463197 EIF6P56537 245 aaKnown RBP7.42□□□□□ -1.22
CCR9-205ENST00000463197 GPSM2P81274 684 aa7.42□□□□□ -1.22
CCR9-205ENST00000463197 LMOD3Q0VAK6 560 aa7.42□□□□□ -1.22
CCR9-205ENST00000463197 KIAA2012Q0VF49 1180 aa7.42□□□□□ -1.22
CCR9-205ENST00000463197 TRIM28Q13263 835 aaKnown RBP7.42□□□□□ -1.22
CCR9-205ENST00000463197 GRAPQ13588 217 aa7.42□□□□□ -1.22
CCR9-205ENST00000463197 PNMA8AQ86V59 439 aaPredicted RBP7.42□□□□□ -1.22
CCR9-205ENST00000463197 TNS4Q8IZW8 715 aa7.42□□□□□ -1.22
CCR9-205ENST00000463197 MPNDQ8N594 471 aa7.42□□□□□ -1.22
CCR9-205ENST00000463197 GRAPLQ8TC17 118 aaPredicted RBP7.42□□□□□ -1.22
CCR9-205ENST00000463197 TRPM4Q8TD43 1214 aa7.42□□□□□ -1.22
CCR9-205ENST00000463197 ZIC5Q96T25 663 aa7.42□□□□□ -1.22
CCR9-205ENST00000463197 WBP1LQ9NX94 342 aa7.42□□□□□ -1.22
CCR9-205ENST00000463197 DBF4Q9UBU7 674 aaPredicted RBP7.42□□□□□ -1.22
CCR9-205ENST00000463197 ZNRF3Q9ULT6 936 aa7.42□□□□□ -1.22
CCR9-205ENST00000463197 SH3TC1Q8TE82 1336 aa7.42□□□□□ -1.22
CCR9-205ENST00000463197 DUOX1Q9NRD9 1551 aa7.42□□□□□ -1.22
CCR9-205ENST00000463197 RIMBP2O15034 1052 aa7.41□□□□□ -1.22
CCR9-205ENST00000463197 DEFB115Q30KQ5 88 aa7.41□□□□□ -1.22
CCR9-205ENST00000463197 GRIPAP1Q4V328 841 aa7.41□□□□□ -1.22
CCR9-205ENST00000463197 HSP90AB3PQ58FF7 597 aa7.41□□□□□ -1.22
CCR9-205ENST00000463197 DPP8Q6V1X1 898 aaPredicted RBP7.41□□□□□ -1.22
CCR9-205ENST00000463197 USP50Q70EL3 339 aaPredicted RBP7.41□□□□□ -1.22
CCR9-205ENST00000463197 G2E3Q7L622 706 aa7.41□□□□□ -1.22
CCR9-205ENST00000463197 NIM1KQ8IY84 436 aa7.41□□□□□ -1.22
CCR9-205ENST00000463197 GLIS2Q9BZE0 524 aaPredicted RBP7.41□□□□□ -1.22
CCR9-205ENST00000463197 VPS33BQ9H267 617 aa7.41□□□□□ -1.22
CCR9-205ENST00000463197 WDR33Q9C0J8 1336 aaKnown RBP7.41□□□□□ -1.22
CCR9-205ENST00000463197 RTL9Q8NET4 1388 aa7.41□□□□□ -1.22
CCR9-205ENST00000463197 IRS4O14654 1257 aaPredicted RBP7.4□□□□□ -1.22
CCR9-205ENST00000463197 AOC2O75106 756 aa7.4□□□□□ -1.22
CCR9-205ENST00000463197 IGKV5-2P06315 115 aa7.4□□□□□ -1.22
CCR9-205ENST00000463197 HOXB7P09629 217 aa7.4□□□□□ -1.22
CCR9-205ENST00000463197 LBX1P52954 281 aa7.4□□□□□ -1.22
CCR9-205ENST00000463197 WDR43Q15061 677 aaKnown RBP eCLIP7.4□□□□□ -1.22
CCR9-205ENST00000463197 DOK7Q18PE1 504 aa7.4□□□□□ -1.22
CCR9-205ENST00000463197 CYP4F22Q6NT55 531 aa7.4□□□□□ -1.22
CCR9-205ENST00000463197 DDX46Q7L014 1031 aaKnown RBP7.4□□□□□ -1.22
CCR9-205ENST00000463197 SAMD7Q7Z3H4 446 aa7.4□□□□□ -1.22
CCR9-205ENST00000463197 TSR2Q969E8 191 aaKnown RBP7.4□□□□□ -1.22
CCR9-205ENST00000463197 MYD88Q99836 296 aa7.4□□□□□ -1.22
CCR9-205ENST00000463197 DBNDD1Q9H9R9 158 aa7.4□□□□□ -1.22
CCR9-205ENST00000463197 CNOT7Q9UIV1 285 aaKnown RBP7.4□□□□□ -1.22
CCR9-205ENST00000463197 NSFL1CQ9UNZ2 370 aaKnown RBP7.4□□□□□ -1.22
CCR9-205ENST00000463197 ASTN2O75129 1339 aaPredicted RBP7.4□□□□□ -1.22
CCR9-205ENST00000463197 TAF1P21675 1872 aa7.39□□□□□ -1.23
CCR9-205ENST00000463197 SCN4AP35499 1836 aa7.39□□□□□ -1.23
CCR9-205ENST00000463197 PSMD14O00487 310 aa7.39□□□□□ -1.23
CCR9-205ENST00000463197 HSPA8P11142 646 aaKnown RBP7.39□□□□□ -1.23
CCR9-205ENST00000463197 RPS8P62241 208 aaKnown RBP7.39□□□□□ -1.23
CCR9-205ENST00000463197 CIAPIN1Q6FI81 312 aa7.39□□□□□ -1.23
CCR9-205ENST00000463197 ZBTB38Q8NAP3 1195 aaPredicted RBP7.39□□□□□ -1.23
CCR9-205ENST00000463197 TBC1D16Q8TBP0 767 aa7.39□□□□□ -1.23
CCR9-205ENST00000463197 CCDC85AQ96PX6 553 aaPredicted RBP7.39□□□□□ -1.23
CCR9-205ENST00000463197 ADARB2Q9NS39 739 aaKnown RBP7.39□□□□□ -1.23
CCR9-205ENST00000463197 IFT57Q9NWB7 429 aa7.39□□□□□ -1.23
CCR9-205ENST00000463197 HYPKQ9NX55 129 aa7.39□□□□□ -1.23
CCR9-205ENST00000463197 TLL2Q9Y6L7 1015 aa7.39□□□□□ -1.23
CCR9-205ENST00000463197 LMOD1P29536 600 aaPredicted RBP7.38□□□□□ -1.23
CCR9-205ENST00000463197 WASHC4Q2M389 1173 aa7.38□□□□□ -1.23
CCR9-205ENST00000463197 RIC3Q7Z5B4 369 aa7.38□□□□□ -1.23
CCR9-205ENST00000463197 SAPCD2Q86UD0 394 aa7.38□□□□□ -1.23
CCR9-205ENST00000463197 USP48Q86UV5 1035 aa7.38□□□□□ -1.23
CCR9-205ENST00000463197 MICALL2Q8IY33 904 aa7.38□□□□□ -1.23
CCR9-205ENST00000463197 SUPT20HQ8NEM7 779 aa7.38□□□□□ -1.23
CCR9-205ENST00000463197 CAPNS2Q96L46 248 aa7.38□□□□□ -1.23
CCR9-205ENST00000463197 SPINK5Q9NQ38 1064 aaPredicted RBP7.38□□□□□ -1.23
CCR9-205ENST00000463197 TSKSQ9UJT2 592 aa7.38□□□□□ -1.23
CCR9-205ENST00000463197 SCAF8Q9UPN6 1271 aaKnown RBP7.38□□□□□ -1.23
CCR9-205ENST00000463197 LAMB2P55268 1798 aa7.38□□□□□ -1.23
CCR9-205ENST00000463197 PCCAP05165 728 aaPredicted RBP7.37□□□□□ -1.23
CCR9-205ENST00000463197 CASP7P55210 303 aa7.37□□□□□ -1.23
CCR9-205ENST00000463197 GNAI1P63096 354 aa7.37□□□□□ -1.23
CCR9-205ENST00000463197 CWF19L2Q2TBE0 894 aaKnown RBP7.37□□□□□ -1.23
CCR9-205ENST00000463197 TBC1D10BQ4KMP7 808 aaPredicted RBP7.37□□□□□ -1.23
CCR9-205ENST00000463197 TXNRD3Q86VQ6 643 aa7.37□□□□□ -1.23
CCR9-205ENST00000463197 WWC1Q8IX03 1113 aa7.37□□□□□ -1.23
CCR9-205ENST00000463197 METTL22Q9BUU2 404 aaPredicted RBP7.37□□□□□ -1.23
CCR9-205ENST00000463197 MXD3Q9BW11 206 aa7.37□□□□□ -1.23
CCR9-205ENST00000463197 PRDM10Q9NQV6 1147 aa7.37□□□□□ -1.23
CCR9-205ENST00000463197 PODXL2Q9NZ53 605 aa7.37□□□□□ -1.23
CCR9-205ENST00000463197 ABT1Q9ULW3 272 aaKnown RBP7.37□□□□□ -1.23
CCR9-205ENST00000463197 MAP3K2Q9Y2U5 619 aa7.37□□□□□ -1.23
CCR9-205ENST00000463197 DDX60Q8IY21 1712 aaKnown RBP7.37□□□□□ -1.23
CCR9-205ENST00000463197 PI4KAP2A4QPH2 592 aa7.36□□□□□ -1.23
CCR9-205ENST00000463197 FAM155AB1AL88 458 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms