RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 KCNB2Q92953 911 aa12.28□□□□□ -0.44
MSH5-211ENST00000463144 TBC1D2BQ9UPU7 963 aa12.28□□□□□ -0.44
MSH5-211ENST00000463144 CCDC171Q6TFL3 1326 aa12.28□□□□□ -0.44
MSH5-211ENST00000463144 CHGBP05060 677 aa12.28□□□□□ -0.44
MSH5-211ENST00000463144 TTC14Q96N46 770 aa12.28□□□□□ -0.44
MSH5-211ENST00000463144 CCDC85AQ96PX6 553 aaPredicted RBP12.28□□□□□ -0.44
MSH5-211ENST00000463144 HAUS7Q99871 368 aa12.28□□□□□ -0.44
MSH5-211ENST00000463144 CWC22Q9HCG8 908 aaKnown RBP12.28□□□□□ -0.44
MSH5-211ENST00000463144 MED23Q9ULK4 1368 aa12.27□□□□□ -0.44
MSH5-211ENST00000463144 CDHR2Q9BYE9 1310 aa12.27□□□□□ -0.44
MSH5-211ENST00000463144 NOL8Q76FK4 1167 aaKnown RBP12.27□□□□□ -0.44
MSH5-211ENST00000463144 DZIP3Q86Y13 1208 aaKnown RBP12.27□□□□□ -0.44
MSH5-211ENST00000463144 MAP4K1Q92918 833 aa12.27□□□□□ -0.44
MSH5-211ENST00000463144 NEUROD6Q96NK8 337 aa12.27□□□□□ -0.44
MSH5-211ENST00000463144 ZNF609O15014 1411 aa12.27□□□□□ -0.45
MSH5-211ENST00000463144 A0A0G2JS52 829 aa12.27□□□□□ -0.45
MSH5-211ENST00000463144 ERVV-1B6SEH8 477 aa12.27□□□□□ -0.45
MSH5-211ENST00000463144 KCNQ2O43526 872 aa12.27□□□□□ -0.45
MSH5-211ENST00000463144 HSPA1LP34931 641 aa12.27□□□□□ -0.45
MSH5-211ENST00000463144 EIF5P55010 431 aaKnown RBP12.27□□□□□ -0.45
MSH5-211ENST00000463144 ITPK1Q13572 414 aa12.27□□□□□ -0.45
MSH5-211ENST00000463144 CCDC57Q2TAC2 916 aa12.27□□□□□ -0.45
MSH5-211ENST00000463144 ADCK5Q3MIX3 580 aa12.27□□□□□ -0.45
MSH5-211ENST00000463144 HSP90AB3PQ58FF7 597 aa12.27□□□□□ -0.45
MSH5-211ENST00000463144 PRPF40BQ6NWY9 871 aaKnown RBP12.27□□□□□ -0.45
MSH5-211ENST00000463144 CLEC17AQ6ZS10 378 aa12.27□□□□□ -0.45
MSH5-211ENST00000463144 RBM8AQ9Y5S9 174 aaKnown RBP12.27□□□□□ -0.45
MSH5-211ENST00000463144 TRAK2O60296 914 aa12.26□□□□□ -0.45
MSH5-211ENST00000463144 ZNF589Q86UQ0 364 aaPredicted RBP12.26□□□□□ -0.45
MSH5-211ENST00000463144 DNAJC2Q99543 621 aaKnown RBP12.26□□□□□ -0.45
MSH5-211ENST00000463144 ZDHHC9Q9Y397 364 aa12.26□□□□□ -0.45
MSH5-211ENST00000463144 MYH14Q7Z406 1995 aaKnown RBP12.26□□□□□ -0.45
MSH5-211ENST00000463144 BCL9LQ86UU0 1499 aa12.26□□□□□ -0.45
MSH5-211ENST00000463144 RREB1Q92766 1687 aa12.26□□□□□ -0.45
MSH5-211ENST00000463144 UBN2Q6ZU65 1347 aa12.26□□□□□ -0.45
MSH5-211ENST00000463144 LOC102724428A0A0B4J2F2 783 aa12.26□□□□□ -0.45
MSH5-211ENST00000463144 A0A1B0GUL7 405 aa12.26□□□□□ -0.45
MSH5-211ENST00000463144 CPA1P15085 419 aa12.26□□□□□ -0.45
MSH5-211ENST00000463144 ATP6V1AP38606 617 aa12.26□□□□□ -0.45
MSH5-211ENST00000463144 SIK1P57059 783 aa12.26□□□□□ -0.45
MSH5-211ENST00000463144 NUCB2P80303 420 aa12.26□□□□□ -0.45
MSH5-211ENST00000463144 ZNF34Q8IZ26 560 aa12.26□□□□□ -0.45
MSH5-211ENST00000463144 TTLL11Q8NHH1 800 aa12.26□□□□□ -0.45
MSH5-211ENST00000463144 JCADQ9P266 1359 aa12.25□□□□□ -0.45
MSH5-211ENST00000463144 DDX11L8A8MPP1 907 aa12.25□□□□□ -0.45
MSH5-211ENST00000463144 CRKLP46109 303 aaKnown RBP12.25□□□□□ -0.45
MSH5-211ENST00000463144 DDX46Q7L014 1031 aaKnown RBP12.25□□□□□ -0.45
MSH5-211ENST00000463144 GBP4Q96PP9 640 aa12.25□□□□□ -0.45
MSH5-211ENST00000463144 CCDC87Q9NVE4 849 aa12.25□□□□□ -0.45
MSH5-211ENST00000463144 CICQ96RK0 1608 aaPredicted RBP12.25□□□□□ -0.45
MSH5-211ENST00000463144 MYH3P11055 1940 aa12.25□□□□□ -0.45
MSH5-211ENST00000463144 AK2P54819 239 aa12.25□□□□□ -0.45
MSH5-211ENST00000463144 IFIT5Q13325 482 aaKnown RBP12.25□□□□□ -0.45
MSH5-211ENST00000463144 COL9A3Q14050 684 aaPredicted RBP12.25□□□□□ -0.45
MSH5-211ENST00000463144 FAM98CQ17RN3 349 aaKnown RBP12.25□□□□□ -0.45
MSH5-211ENST00000463144 CREB3L3Q68CJ9 461 aa12.25□□□□□ -0.45
MSH5-211ENST00000463144 IL27Q8NEV9 243 aa12.25□□□□□ -0.45
MSH5-211ENST00000463144 C8orf37Q96NL8 207 aa12.25□□□□□ -0.45
MSH5-211ENST00000463144 CEP126Q9P2H0 1117 aa12.25□□□□□ -0.45
MSH5-211ENST00000463144 TRMT112Q9UI30 125 aaKnown RBP12.25□□□□□ -0.45
MSH5-211ENST00000463144 FBXO3Q9UK99 471 aa12.25□□□□□ -0.45
MSH5-211ENST00000463144 IRS4O14654 1257 aaPredicted RBP12.24□□□□□ -0.45
MSH5-211ENST00000463144 TAF5LO75529 589 aa12.24□□□□□ -0.45
MSH5-211ENST00000463144 BAG4O95429 457 aaKnown RBP12.24□□□□□ -0.45
MSH5-211ENST00000463144 CASTP20810 708 aaKnown RBP12.24□□□□□ -0.45
MSH5-211ENST00000463144 RUFY3Q7L099 469 aa12.24□□□□□ -0.45
MSH5-211ENST00000463144 KBTBD3Q8NAB2 608 aa12.24□□□□□ -0.45
MSH5-211ENST00000463144 INTS4Q96HW7 963 aaKnown RBP12.24□□□□□ -0.45
MSH5-211ENST00000463144 SEC62Q99442 399 aaKnown RBP12.24□□□□□ -0.45
MSH5-211ENST00000463144 LARP6Q9BRS8 491 aaKnown RBP12.24□□□□□ -0.45
MSH5-211ENST00000463144 GREM2Q9H772 168 aa12.24□□□□□ -0.45
MSH5-211ENST00000463144 RFX7Q2KHR2 1363 aa12.24□□□□□ -0.45
MSH5-211ENST00000463144 PALLDQ8WX93 1383 aa12.24□□□□□ -0.45
MSH5-211ENST00000463144 SLC27A2O14975 620 aa12.23□□□□□ -0.45
MSH5-211ENST00000463144 CTSWP56202 376 aa12.23□□□□□ -0.45
MSH5-211ENST00000463144 NGLY1Q96IV0 654 aa12.23□□□□□ -0.45
MSH5-211ENST00000463144 JAKMIP1Q96N16 626 aaKnown RBP12.23□□□□□ -0.45
MSH5-211ENST00000463144 TM6SF1Q9BZW5 370 aa12.23□□□□□ -0.45
MSH5-211ENST00000463144 ZSWIM6Q9HCJ5 1215 aa12.23□□□□□ -0.45
MSH5-211ENST00000463144 RIPOR2Q9Y4F9 1068 aa12.23□□□□□ -0.45
MSH5-211ENST00000463144 TAF6LQ9Y6J9 622 aa12.23□□□□□ -0.45
MSH5-211ENST00000463144 ITGA6P23229 1130 aa12.23□□□□□ -0.45
MSH5-211ENST00000463144 ADORA1P30542 326 aa12.23□□□□□ -0.45
MSH5-211ENST00000463144 VPS72Q15906 364 aa12.23□□□□□ -0.45
MSH5-211ENST00000463144 SLFNL1Q499Z3 407 aa12.23□□□□□ -0.45
MSH5-211ENST00000463144 PAG1Q9NWQ8 432 aa12.23□□□□□ -0.45
MSH5-211ENST00000463144 RIC1Q4ADV7 1423 aa12.23□□□□□ -0.45
MSH5-211ENST00000463144 GOLIM4O00461 696 aa12.22□□□□□ -0.45
MSH5-211ENST00000463144 SUSD4Q5VX71 490 aa12.22□□□□□ -0.45
MSH5-211ENST00000463144 CCDC129Q6ZRS4 1044 aa12.22□□□□□ -0.45
MSH5-211ENST00000463144 COL5A3P25940 1745 aaPredicted RBP12.22□□□□□ -0.45
MSH5-211ENST00000463144 PDE8AO60658 829 aa12.22□□□□□ -0.45
MSH5-211ENST00000463144 CAMTA2O94983 1202 aa12.22□□□□□ -0.45
MSH5-211ENST00000463144 IFIT1P09914 478 aaKnown RBP12.22□□□□□ -0.45
MSH5-211ENST00000463144 TAF7LQ5H9L4 462 aa12.22□□□□□ -0.45
MSH5-211ENST00000463144 USPL1Q5W0Q7 1092 aa12.22□□□□□ -0.45
MSH5-211ENST00000463144 XAGE2Q96GT9 111 aa12.22□□□□□ -0.45
MSH5-211ENST00000463144 RPAP1Q9BWH6 1393 aaPredicted RBP12.21□□□□□ -0.45
MSH5-211ENST00000463144 KCNJ4P48050 445 aa12.21□□□□□ -0.45
MSH5-211ENST00000463144 MCMDC2Q4G0Z9 681 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms