RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	PDE8A	O60658	829 aa		12.19	□□□□□ -0.46
PSMD4-208	ENST00000462970	CT47B1	P0C2W7	299 aa	Predicted RBP	12.19	□□□□□ -0.46
PSMD4-208	ENST00000462970	LMNB1	P20700	586 aa		12.19	□□□□□ -0.46
PSMD4-208	ENST00000462970	GCKR	Q14397	625 aa		12.19	□□□□□ -0.46
PSMD4-208	ENST00000462970	SLC51A	Q86UW1	340 aa		12.19	□□□□□ -0.46
PSMD4-208	ENST00000462970	TAOK3	Q9H2K8	898 aa		12.19	□□□□□ -0.46
PSMD4-208	ENST00000462970	GPBP1L1	Q9HC44	474 aa	Predicted RBP	12.19	□□□□□ -0.46
PSMD4-208	ENST00000462970	TIAM2	Q8IVF5	1701 aa		12.19	□□□□□ -0.46
PSMD4-208	ENST00000462970	DICER1	Q9UPY3	1922 aa	Known RBP	12.18	□□□□□ -0.46
PSMD4-208	ENST00000462970	GRAP	Q13588	217 aa		12.18	□□□□□ -0.46
PSMD4-208	ENST00000462970	BEND3	Q5T5X7	828 aa		12.18	□□□□□ -0.46
PSMD4-208	ENST00000462970	GRAPL	Q8TC17	118 aa	Predicted RBP	12.18	□□□□□ -0.46
PSMD4-208	ENST00000462970	SRCIN1	Q9C0H9	1055 aa		12.18	□□□□□ -0.46
PSMD4-208	ENST00000462970	C9orf78	Q9NZ63	289 aa	Predicted RBP	12.18	□□□□□ -0.46
PSMD4-208	ENST00000462970	PTPRC	P08575	1304 aa		12.17	□□□□□ -0.46
PSMD4-208	ENST00000462970	CDHR2	Q9BYE9	1310 aa		12.17	□□□□□ -0.46
PSMD4-208	ENST00000462970	RARS	P54136	660 aa	Known RBP	12.17	□□□□□ -0.46
PSMD4-208	ENST00000462970	SF3B3	Q15393	1217 aa	Known RBP	12.17	□□□□□ -0.46
PSMD4-208	ENST00000462970	CCDC152	Q4G0S7	254 aa		12.17	□□□□□ -0.46
PSMD4-208	ENST00000462970	RTKN2	Q8IZC4	609 aa		12.17	□□□□□ -0.46
PSMD4-208	ENST00000462970	C7orf43	Q8WVR3	580 aa		12.17	□□□□□ -0.46
PSMD4-208	ENST00000462970	FRAT1	Q92837	279 aa	Predicted RBP	12.17	□□□□□ -0.46
PSMD4-208	ENST00000462970	YTHDC1	Q96MU7	727 aa	Known RBP	12.17	□□□□□ -0.46
PSMD4-208	ENST00000462970	SEC31B	Q9NQW1	1179 aa		12.17	□□□□□ -0.46
PSMD4-208	ENST00000462970	ZNF277	Q9NRM2	450 aa	Predicted RBP	12.17	□□□□□ -0.46
PSMD4-208	ENST00000462970	NOB1	Q9ULX3	412 aa	Known RBP	12.17	□□□□□ -0.46
PSMD4-208	ENST00000462970	CHMP3	Q9Y3E7	222 aa		12.17	□□□□□ -0.46
PSMD4-208	ENST00000462970		H7C1W4	665 aa		12.16	□□□□□ -0.46
PSMD4-208	ENST00000462970	BBOX1	O75936	387 aa		12.16	□□□□□ -0.46
PSMD4-208	ENST00000462970	CTSW	P56202	376 aa		12.16	□□□□□ -0.46
PSMD4-208	ENST00000462970	FKBP4	Q02790	459 aa	Known RBP eCLIP	12.16	□□□□□ -0.46
PSMD4-208	ENST00000462970	CELF1	Q92879	486 aa	Known RBP	12.16	□□□□□ -0.46
PSMD4-208	ENST00000462970	ATP6V0A2	Q9Y487	856 aa		12.16	□□□□□ -0.46
PSMD4-208	ENST00000462970	GRM8	O00222	908 aa		12.15	□□□□□ -0.46
PSMD4-208	ENST00000462970	ALDH1L1	O75891	902 aa		12.15	□□□□□ -0.46
PSMD4-208	ENST00000462970	PRELP	P51888	382 aa		12.15	□□□□□ -0.46
PSMD4-208	ENST00000462970	CC2D2B	Q6DHV5	1058 aa		12.15	□□□□□ -0.46
PSMD4-208	ENST00000462970	COL4A1	P02462	1669 aa		12.15	□□□□□ -0.46
PSMD4-208	ENST00000462970	KIF16B	Q96L93	1317 aa		12.14	□□□□□ -0.47
PSMD4-208	ENST00000462970	LTBP3	Q9NS15	1303 aa		12.14	□□□□□ -0.47
PSMD4-208	ENST00000462970	BCAR3	O75815	825 aa		12.14	□□□□□ -0.47
PSMD4-208	ENST00000462970	RPS8	P62241	208 aa	Known RBP	12.14	□□□□□ -0.47
PSMD4-208	ENST00000462970	DPP8	Q6V1X1	898 aa	Predicted RBP	12.14	□□□□□ -0.47
PSMD4-208	ENST00000462970	ANKRD18A	Q8IVF6	992 aa		12.14	□□□□□ -0.47
PSMD4-208	ENST00000462970	SP8	Q8IXZ3	490 aa		12.14	□□□□□ -0.47
PSMD4-208	ENST00000462970	MPND	Q8N594	471 aa		12.14	□□□□□ -0.47
PSMD4-208	ENST00000462970	API5	Q9BZZ5	524 aa	Known RBP	12.14	□□□□□ -0.47
PSMD4-208	ENST00000462970	GREM2	Q9H772	168 aa		12.14	□□□□□ -0.47
PSMD4-208	ENST00000462970	FOXD4L1	Q9NU39	408 aa		12.14	□□□□□ -0.47
PSMD4-208	ENST00000462970	IARS	P41252	1262 aa	Known RBP	12.13	□□□□□ -0.47
PSMD4-208	ENST00000462970	FAM161A	Q3B820	660 aa		12.13	□□□□□ -0.47
PSMD4-208	ENST00000462970	TTLL11	Q8NHH1	800 aa		12.13	□□□□□ -0.47
PSMD4-208	ENST00000462970	CDC5L	Q99459	802 aa	Known RBP	12.13	□□□□□ -0.47
PSMD4-208	ENST00000462970	C6orf229	H3BNL8	230 aa		12.12	□□□□□ -0.47
PSMD4-208	ENST00000462970	KIF3C	O14782	793 aa		12.12	□□□□□ -0.47
PSMD4-208	ENST00000462970	ZBTB22	O15209	634 aa		12.12	□□□□□ -0.47
PSMD4-208	ENST00000462970	IPO8	O15397	1037 aa	Known RBP	12.12	□□□□□ -0.47
PSMD4-208	ENST00000462970	PPIP5K2	O43314	1243 aa		12.12	□□□□□ -0.47
PSMD4-208	ENST00000462970	CASP7	P55210	303 aa		12.12	□□□□□ -0.47
PSMD4-208	ENST00000462970	GRIPAP1	Q4V328	841 aa		12.12	□□□□□ -0.47
PSMD4-208	ENST00000462970	TMC4	Q7Z404	712 aa		12.12	□□□□□ -0.47
PSMD4-208	ENST00000462970	LARGE2	Q8N3Y3	721 aa		12.12	□□□□□ -0.47
PSMD4-208	ENST00000462970	SUPT20H	Q8NEM7	779 aa		12.12	□□□□□ -0.47
PSMD4-208	ENST00000462970	ANKIB1	Q9P2G1	1089 aa		12.12	□□□□□ -0.47
PSMD4-208	ENST00000462970	NSFL1C	Q9UNZ2	370 aa	Known RBP	12.12	□□□□□ -0.47
PSMD4-208	ENST00000462970	KDM2B	Q8NHM5	1336 aa		12.11	□□□□□ -0.47
PSMD4-208	ENST00000462970	LRRC37A	A6NMS7	1700 aa		12.11	□□□□□ -0.47
PSMD4-208	ENST00000462970	NBPF7	P0C2Y1	421 aa	Predicted RBP	12.11	□□□□□ -0.47
PSMD4-208	ENST00000462970	ITGA6	P23229	1130 aa		12.11	□□□□□ -0.47
PSMD4-208	ENST00000462970	CCT4	P50991	539 aa	Known RBP	12.11	□□□□□ -0.47
PSMD4-208	ENST00000462970	GPSM2	P81274	684 aa		12.11	□□□□□ -0.47
PSMD4-208	ENST00000462970	AOC3	Q16853	763 aa		12.11	□□□□□ -0.47
PSMD4-208	ENST00000462970	TAF7L	Q5H9L4	462 aa		12.11	□□□□□ -0.47
PSMD4-208	ENST00000462970	LMBR1L	Q6UX01	489 aa		12.11	□□□□□ -0.47
PSMD4-208	ENST00000462970	JDP2	Q8WYK2	163 aa		12.11	□□□□□ -0.47
PSMD4-208	ENST00000462970	CLUAP1	Q96AJ1	413 aa		12.11	□□□□□ -0.47
PSMD4-208	ENST00000462970	SUCLG2	Q96I99	432 aa		12.11	□□□□□ -0.47
PSMD4-208	ENST00000462970	PSMD1	Q99460	953 aa		12.11	□□□□□ -0.47
PSMD4-208	ENST00000462970	PLA2G12B	Q9BX93	195 aa		12.11	□□□□□ -0.47
PSMD4-208	ENST00000462970	ANKRD18B	A2A2Z9	1011 aa		12.1	□□□□□ -0.47
PSMD4-208	ENST00000462970	RIMBP2	O15034	1052 aa		12.1	□□□□□ -0.47
PSMD4-208	ENST00000462970	IGHMBP2	P38935	993 aa	Known RBP	12.1	□□□□□ -0.47
PSMD4-208	ENST00000462970	FOXO4	P98177	505 aa		12.1	□□□□□ -0.47
PSMD4-208	ENST00000462970	IFIT5	Q13325	482 aa	Known RBP	12.1	□□□□□ -0.47
PSMD4-208	ENST00000462970	EPHA10	Q5JZY3	1008 aa		12.1	□□□□□ -0.47
PSMD4-208	ENST00000462970	DPY19L2	Q6NUT2	758 aa		12.1	□□□□□ -0.47
PSMD4-208	ENST00000462970	NIM1K	Q8IY84	436 aa		12.1	□□□□□ -0.47
PSMD4-208	ENST00000462970	GPR101	Q96P66	508 aa	Predicted RBP	12.1	□□□□□ -0.47
PSMD4-208	ENST00000462970	NMRK2	Q9NPI5	230 aa		12.1	□□□□□ -0.47
PSMD4-208	ENST00000462970	TNN	Q9UQP3	1299 aa		12.1	□□□□□ -0.47
PSMD4-208	ENST00000462970		G3V3G9	751 aa		12.09	□□□□□ -0.47
PSMD4-208	ENST00000462970	UFL1	O94874	794 aa		12.09	□□□□□ -0.47
PSMD4-208	ENST00000462970	BRPF1	P55201	1214 aa	Predicted RBP	12.09	□□□□□ -0.47
PSMD4-208	ENST00000462970	CCDC57	Q2TAC2	916 aa		12.09	□□□□□ -0.47
PSMD4-208	ENST00000462970	DCAF8	Q5TAQ9	597 aa		12.09	□□□□□ -0.47
PSMD4-208	ENST00000462970	ZKSCAN2	Q63HK3	967 aa		12.09	□□□□□ -0.47
PSMD4-208	ENST00000462970	MPHOSPH8	Q99549	860 aa		12.09	□□□□□ -0.47
PSMD4-208	ENST00000462970	RRAGC	Q9HB90	399 aa		12.09	□□□□□ -0.47
PSMD4-208	ENST00000462970	GJA3	Q9Y6H8	435 aa		12.09	□□□□□ -0.47
PSMD4-208	ENST00000462970	ZC3H4	Q9UPT8	1303 aa	Known RBP	12.09	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms