RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 SPTLC2O15270 562 aa18.13■□□□□ 0.49
SMC4-204ENST00000462787 EZRP15311 586 aaKnown RBP18.13■□□□□ 0.49
SMC4-204ENST00000462787 CYLC1P35663 651 aaPredicted RBP18.12■□□□□ 0.49
SMC4-204ENST00000462787 FAM160A1Q05DH4 1040 aa18.12■□□□□ 0.49
SMC4-204ENST00000462787 GPT2Q8TD30 523 aa18.12■□□□□ 0.49
SMC4-204ENST00000462787 UTP14AQ9BVJ6 771 aaKnown RBP18.12■□□□□ 0.49
SMC4-204ENST00000462787 HYPKQ9NX55 129 aa18.12■□□□□ 0.49
SMC4-204ENST00000462787 DMRT2Q9Y5R5 561 aa18.12■□□□□ 0.49
SMC4-204ENST00000462787 SPECC1Q5M775 1068 aa18.11■□□□□ 0.49
SMC4-204ENST00000462787 Q6ZUG5 572 aa18.11■□□□□ 0.49
SMC4-204ENST00000462787 TCEANC2Q96MN5 208 aa18.11■□□□□ 0.49
SMC4-204ENST00000462787 CCDC178Q5BJE1 867 aa18.11■□□□□ 0.49
SMC4-204ENST00000462787 FAM114A1Q8IWE2 563 aa18.11■□□□□ 0.49
SMC4-204ENST00000462787 RAD50Q92878 1312 aa18.11■□□□□ 0.49
SMC4-204ENST00000462787 CREB3L3Q68CJ9 461 aa18.11■□□□□ 0.49
SMC4-204ENST00000462787 TSPYL6Q8N831 410 aa18.11■□□□□ 0.49
SMC4-204ENST00000462787 IDH1O75874 414 aaKnown RBP18.11■□□□□ 0.49
SMC4-204ENST00000462787 FAM76AQ8TAV0 307 aa18.11■□□□□ 0.49
SMC4-204ENST00000462787 ITSN2Q9NZM3 1697 aa18.1■□□□□ 0.49
SMC4-204ENST00000462787 GOLIM4O00461 696 aa18.1■□□□□ 0.49
SMC4-204ENST00000462787 VPS36Q86VN1 386 aa18.1■□□□□ 0.49
SMC4-204ENST00000462787 TRMT2AQ8IZ69 625 aaKnown RBP18.1■□□□□ 0.49
SMC4-204ENST00000462787 VGLL3A8MV65 326 aa18.1■□□□□ 0.49
SMC4-204ENST00000462787 GBP6Q6ZN66 633 aa18.1■□□□□ 0.49
SMC4-204ENST00000462787 TSG101Q99816 390 aa18.1■□□□□ 0.49
SMC4-204ENST00000462787 RNF216Q9NWF9 866 aaPredicted RBP18.1■□□□□ 0.49
SMC4-204ENST00000462787 AOX1Q06278 1338 aa18.1■□□□□ 0.49
SMC4-204ENST00000462787 NCOA7Q8NI08 942 aa18.1■□□□□ 0.49
SMC4-204ENST00000462787 MPHOSPH8Q99549 860 aa18.1■□□□□ 0.49
SMC4-204ENST00000462787 BAG1Q99933 345 aaPredicted RBP18.1■□□□□ 0.49
SMC4-204ENST00000462787 CCDC113Q9H0I3 377 aa18.1■□□□□ 0.49
SMC4-204ENST00000462787 PUF60Q9UHX1 559 aaKnown RBP18.1■□□□□ 0.49
SMC4-204ENST00000462787 MKRN1Q9UHC7 482 aaKnown RBP18.09■□□□□ 0.49
SMC4-204ENST00000462787 PHACTR2O75167 634 aa18.09■□□□□ 0.49
SMC4-204ENST00000462787 MTIF2P46199 727 aaKnown RBP18.09■□□□□ 0.49
SMC4-204ENST00000462787 MYL5Q02045 173 aa18.09■□□□□ 0.49
SMC4-204ENST00000462787 CARD6Q9BX69 1037 aa18.09■□□□□ 0.49
SMC4-204ENST00000462787 METAP2P50579 478 aaKnown RBP eCLIP18.09■□□□□ 0.49
SMC4-204ENST00000462787 RMND1Q9NWS8 449 aa18.09■□□□□ 0.49
SMC4-204ENST00000462787 KARSQ15046 597 aaKnown RBP18.08■□□□□ 0.49
SMC4-204ENST00000462787 TDRD12Q587J7 1177 aaKnown RBP18.08■□□□□ 0.49
SMC4-204ENST00000462787 ZNF569Q5MCW4 686 aa18.08■□□□□ 0.49
SMC4-204ENST00000462787 AFAP1L1Q8TED9 768 aa18.08■□□□□ 0.49
SMC4-204ENST00000462787 KRT83P78385 493 aa18.08■□□□□ 0.49
SMC4-204ENST00000462787 CCDC121Q6ZUS5 278 aa18.08■□□□□ 0.49
SMC4-204ENST00000462787 ATRIPQ8WXE1 791 aa18.08■□□□□ 0.49
SMC4-204ENST00000462787 A6NNZ2 444 aa18.08■□□□□ 0.48
SMC4-204ENST00000462787 OAS2P29728 719 aaKnown RBP18.08■□□□□ 0.48
SMC4-204ENST00000462787 TUBB8Q3ZCM7 444 aa18.08■□□□□ 0.48
SMC4-204ENST00000462787 DNAJC21Q5F1R6 531 aaKnown RBP18.08■□□□□ 0.48
SMC4-204ENST00000462787 NAPBQ9H115 298 aa18.08■□□□□ 0.48
SMC4-204ENST00000462787 ZHX3Q9H4I2 956 aa18.08■□□□□ 0.48
SMC4-204ENST00000462787 RHOXF2BP0C7M4 288 aa18.08■□□□□ 0.48
SMC4-204ENST00000462787 MATR3P43243 847 aaKnown RBP eCLIP18.08■□□□□ 0.487e-8■■□□□ 11.8
SMC4-204ENST00000462787 POTEDQ86YR6 584 aa18.08■□□□□ 0.48
SMC4-204ENST00000462787 RHOXF2Q9BQY4 288 aa18.08■□□□□ 0.48
SMC4-204ENST00000462787 CABP4P57796 275 aa18.07■□□□□ 0.48
SMC4-204ENST00000462787 ARFGAP2Q8N6H7 521 aa18.07■□□□□ 0.48
SMC4-204ENST00000462787 PI4KAP2A4QPH2 592 aa18.07■□□□□ 0.48
SMC4-204ENST00000462787 ZSCAN26Q16670 478 aa18.07■□□□□ 0.48
SMC4-204ENST00000462787 BRAPQ7Z569 592 aa18.07■□□□□ 0.48
SMC4-204ENST00000462787 PI4KAP1Q8N8J0 262 aa18.07■□□□□ 0.48
SMC4-204ENST00000462787 SOS1Q07889 1333 aaPredicted RBP18.07■□□□□ 0.48
SMC4-204ENST00000462787 IFIT3O14879 490 aaKnown RBP18.07■□□□□ 0.48
SMC4-204ENST00000462787 BMP15O95972 392 aa18.07■□□□□ 0.48
SMC4-204ENST00000462787 B4GALNT4Q76KP1 1039 aa18.07■□□□□ 0.48
SMC4-204ENST00000462787 KLHL34Q8N239 644 aa18.07■□□□□ 0.48
SMC4-204ENST00000462787 MYD88Q99836 296 aa18.07■□□□□ 0.48
SMC4-204ENST00000462787 ELP1O95163 1332 aa18.07■□□□□ 0.48
SMC4-204ENST00000462787 KLF18A0A0U1RQI7 1052 aa18.07■□□□□ 0.48
SMC4-204ENST00000462787 NMIQ13287 307 aaPredicted RBP18.07■□□□□ 0.48
SMC4-204ENST00000462787 OTUD7AQ8TE49 926 aaPredicted RBP18.07■□□□□ 0.48
SMC4-204ENST00000462787 LZTFL1Q9NQ48 299 aa18.07■□□□□ 0.48
SMC4-204ENST00000462787 KRT86O43790 486 aa18.06■□□□□ 0.48
SMC4-204ENST00000462787 MCMDC2Q4G0Z9 681 aa18.06■□□□□ 0.48
SMC4-204ENST00000462787 WASLO00401 505 aaPredicted RBP18.06■□□□□ 0.48
SMC4-204ENST00000462787 TACC1O75410 805 aa18.06■□□□□ 0.48
SMC4-204ENST00000462787 WAPLQ7Z5K2 1190 aa18.06■□□□□ 0.48
SMC4-204ENST00000462787 CHMP4BP1P59074 171 aa18.06■□□□□ 0.48
SMC4-204ENST00000462787 MAP3K2Q9Y2U5 619 aa18.06■□□□□ 0.48
SMC4-204ENST00000462787 SNX14Q9Y5W7 946 aa18.06■□□□□ 0.48
SMC4-204ENST00000462787 RNF41Q9H4P4 317 aaPredicted RBP18.05■□□□□ 0.48
SMC4-204ENST00000462787 KIF24Q5T7B8 1368 aa18.05■□□□□ 0.48
SMC4-204ENST00000462787 MSL1Q68DK7 614 aa18.05■□□□□ 0.48
SMC4-204ENST00000462787 ALG1Q9BT22 464 aa18.05■□□□□ 0.48
SMC4-204ENST00000462787 SEPT11Q9NVA2 429 aaKnown RBP18.05■□□□□ 0.48
SMC4-204ENST00000462787 DNA2P51530 1060 aa18.05■□□□□ 0.48
SMC4-204ENST00000462787 LEO1Q8WVC0 666 aaPredicted RBP18.05■□□□□ 0.48
SMC4-204ENST00000462787 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.05■□□□□ 0.48
SMC4-204ENST00000462787 SSBP05455 408 aaKnown RBP eCLIP18.05■□□□□ 0.489e-17■■■■■ 55.5
SMC4-204ENST00000462787 AMOTQ4VCS5 1084 aa18.05■□□□□ 0.48
SMC4-204ENST00000462787 TAOK3Q9H2K8 898 aa18.05■□□□□ 0.48
SMC4-204ENST00000462787 GOPCQ9HD26 462 aa18.05■□□□□ 0.48
SMC4-204ENST00000462787 AKR1B10O60218 316 aa18.04■□□□□ 0.48
SMC4-204ENST00000462787 CNGA4Q8IV77 575 aa18.04■□□□□ 0.48
SMC4-204ENST00000462787 LRRC2Q9BYS8 371 aa18.04■□□□□ 0.48
SMC4-204ENST00000462787 ZNF215Q9UL58 517 aaPredicted RBP18.04■□□□□ 0.48
SMC4-204ENST00000462787 TRIM21P19474 475 aaKnown RBP18.04■□□□□ 0.48
SMC4-204ENST00000462787 SHANK2Q9UPX8 1470 aa18.04■□□□□ 0.48
SMC4-204ENST00000462787 ZFYVE9O95405 1425 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms