RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 AACSQ86V21 672 aa18.44■□□□□ 0.54
RPRD1B-203ENST00000462548 GREM2Q9H772 168 aa18.44■□□□□ 0.54
RPRD1B-203ENST00000462548 TLR7Q9NYK1 1049 aaKnown RBP18.44■□□□□ 0.54
RPRD1B-203ENST00000462548 AOX1Q06278 1338 aa18.43■□□□□ 0.54
RPRD1B-203ENST00000462548 USP42Q9H9J4 1324 aaKnown RBP18.43■□□□□ 0.54
RPRD1B-203ENST00000462548 BICDL1Q6ZP65 573 aa18.43■□□□□ 0.54
RPRD1B-203ENST00000462548 CCDC8Q9H0W5 538 aaPredicted RBP18.43■□□□□ 0.54
RPRD1B-203ENST00000462548 RGL2O15211 777 aa18.42■□□□□ 0.54
RPRD1B-203ENST00000462548 CCDC57Q2TAC2 916 aa18.42■□□□□ 0.54
RPRD1B-203ENST00000462548 EYA2O00167 538 aa18.42■□□□□ 0.54
RPRD1B-203ENST00000462548 CDC45O75419 566 aa18.42■□□□□ 0.54
RPRD1B-203ENST00000462548 APBA3O96018 575 aa18.42■□□□□ 0.54
RPRD1B-203ENST00000462548 ZPR1O75312 459 aa18.41■□□□□ 0.54
RPRD1B-203ENST00000462548 IFIT2P09913 472 aaKnown RBP18.41■□□□□ 0.54
RPRD1B-203ENST00000462548 TRAPPC3LQ5T215 181 aa18.41■□□□□ 0.54
RPRD1B-203ENST00000462548 TNS1Q9HBL0 1735 aaKnown RBP18.41■□□□□ 0.54
RPRD1B-203ENST00000462548 LAMB2P55268 1798 aa18.41■□□□□ 0.54
RPRD1B-203ENST00000462548 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.4■□□□□ 0.54
RPRD1B-203ENST00000462548 PLSCR1O15162 318 aa18.4■□□□□ 0.54
RPRD1B-203ENST00000462548 ITGA6P23229 1130 aa18.4■□□□□ 0.54
RPRD1B-203ENST00000462548 MFAP1P55081 439 aaKnown RBP18.4■□□□□ 0.54
RPRD1B-203ENST00000462548 IFIT5Q13325 482 aaKnown RBP18.4■□□□□ 0.54
RPRD1B-203ENST00000462548 TNNI3KQ59H18 835 aa18.4■□□□□ 0.54
RPRD1B-203ENST00000462548 FPGT-TNNI3KV9GXZ4 949 aa18.4■□□□□ 0.54
RPRD1B-203ENST00000462548 COL24A1Q17RW2 1714 aa18.4■□□□□ 0.54
RPRD1B-203ENST00000462548 ERFEQ4G0M1 354 aa18.4■□□□□ 0.54
RPRD1B-203ENST00000462548 CIAO1O76071 339 aa18.39■□□□□ 0.53
RPRD1B-203ENST00000462548 MAP4K4O95819 1239 aaPredicted RBP18.39■□□□□ 0.53
RPRD1B-203ENST00000462548 RFC4P35249 363 aa18.39■□□□□ 0.53
RPRD1B-203ENST00000462548 IL15P40933 162 aaPredicted RBP18.39■□□□□ 0.53
RPRD1B-203ENST00000462548 TTC41PQ6P2S7 1318 aa18.39■□□□□ 0.53
RPRD1B-203ENST00000462548 ECHDC1Q9NTX5 307 aa18.39■□□□□ 0.53
RPRD1B-203ENST00000462548 C3orf67Q6ZVT6 689 aa18.38■□□□□ 0.53
RPRD1B-203ENST00000462548 DBNLQ9UJU6 430 aaKnown RBP18.38■□□□□ 0.53
RPRD1B-203ENST00000462548 ANKRD18BA2A2Z9 1011 aa18.37■□□□□ 0.53
RPRD1B-203ENST00000462548 TRIM6-TRIM34B2RNG4 842 aa18.37■□□□□ 0.53
RPRD1B-203ENST00000462548 ADRA2BP18089 450 aa18.37■□□□□ 0.53
RPRD1B-203ENST00000462548 ABCC12Q96J65 1359 aa18.37■□□□□ 0.53
RPRD1B-203ENST00000462548 COL4A1P02462 1669 aa18.37■□□□□ 0.53
RPRD1B-203ENST00000462548 ZNF827Q17R98 1081 aa18.37■□□□□ 0.53
RPRD1B-203ENST00000462548 TAF7LQ5H9L4 462 aa18.37■□□□□ 0.53
RPRD1B-203ENST00000462548 RILPL2Q969X0 211 aa18.37■□□□□ 0.53
RPRD1B-203ENST00000462548 DBNDD2Q9BQY9 259 aa18.37■□□□□ 0.53
RPRD1B-203ENST00000462548 RIC1Q4ADV7 1423 aa18.36■□□□□ 0.53
RPRD1B-203ENST00000462548 ANP32AP39687 249 aaKnown RBP18.36■□□□□ 0.53
RPRD1B-203ENST00000462548 SETDB2Q96T68 719 aa18.36■□□□□ 0.53
RPRD1B-203ENST00000462548 SEC31BQ9NQW1 1179 aa18.36■□□□□ 0.53
RPRD1B-203ENST00000462548 GLRX3O76003 335 aaKnown RBP18.35■□□□□ 0.53
RPRD1B-203ENST00000462548 TBC1D32Q96NH3 1257 aa18.35■□□□□ 0.53
RPRD1B-203ENST00000462548 FBXO3Q9UK99 471 aa18.35■□□□□ 0.53
RPRD1B-203ENST00000462548 RIPOR2Q9Y4F9 1068 aa18.35■□□□□ 0.53
RPRD1B-203ENST00000462548 CASZ1Q86V15 1759 aa18.35■□□□□ 0.53
RPRD1B-203ENST00000462548 LRP5O75197 1615 aa18.35■□□□□ 0.53
RPRD1B-203ENST00000462548 SSFA2P28290 1259 aa18.35■□□□□ 0.53
RPRD1B-203ENST00000462548 ZNF609O15014 1411 aa18.35■□□□□ 0.53
RPRD1B-203ENST00000462548 TIMM10P62072 90 aa18.34■□□□□ 0.53
RPRD1B-203ENST00000462548 CCDC24Q8N4L8 307 aa18.34■□□□□ 0.53
RPRD1B-203ENST00000462548 GPR108Q9NPR9 543 aa18.34■□□□□ 0.53
RPRD1B-203ENST00000462548 GYS1P13807 737 aa18.34■□□□□ 0.53
RPRD1B-203ENST00000462548 NFIXQ14938 502 aa18.34■□□□□ 0.53
RPRD1B-203ENST00000462548 LDHAL6AQ6ZMR3 332 aa18.34■□□□□ 0.53
RPRD1B-203ENST00000462548 AKT1S1Q96B36 256 aa18.34■□□□□ 0.53
RPRD1B-203ENST00000462548 GPATCH3Q96I76 525 aa18.34■□□□□ 0.53
RPRD1B-203ENST00000462548 ERC2O15083 957 aa18.33■□□□□ 0.53
RPRD1B-203ENST00000462548 SLC10A5Q5PT55 438 aa18.33■□□□□ 0.53
RPRD1B-203ENST00000462548 NBPF5PQ86XG9 351 aaPredicted RBP18.33■□□□□ 0.53
RPRD1B-203ENST00000462548 AK9Q5TCS8 1911 aa18.33■□□□□ 0.53
RPRD1B-203ENST00000462548 UPF2Q9HAU5 1272 aaKnown RBP18.33■□□□□ 0.52
RPRD1B-203ENST00000462548 CEP126Q9P2H0 1117 aa18.33■□□□□ 0.52
RPRD1B-203ENST00000462548 RTL9Q8NET4 1388 aa18.33■□□□□ 0.52
RPRD1B-203ENST00000462548 CCDC152Q4G0S7 254 aa18.32■□□□□ 0.52
RPRD1B-203ENST00000462548 CHMLP26374 656 aa18.32■□□□□ 0.52
RPRD1B-203ENST00000462548 NEUROD6Q96NK8 337 aa18.32■□□□□ 0.52
RPRD1B-203ENST00000462548 C22orf23Q9BZE7 217 aa18.32■□□□□ 0.52
RPRD1B-203ENST00000462548 NYXQ9GZU5 481 aa18.32■□□□□ 0.52
RPRD1B-203ENST00000462548 BOLA2Q9H3K6 86 aa18.32■□□□□ 0.52
RPRD1B-203ENST00000462548 CNNM1Q9NRU3 951 aa18.32■□□□□ 0.52
RPRD1B-203ENST00000462548 A0A1B0GUL7 405 aa18.31■□□□□ 0.52
RPRD1B-203ENST00000462548 GTF2E1P29083 439 aaPredicted RBP18.31■□□□□ 0.52
RPRD1B-203ENST00000462548 SF3B3Q15393 1217 aaKnown RBP18.31■□□□□ 0.52
RPRD1B-203ENST00000462548 SPEF2Q9C093 1822 aa18.31■□□□□ 0.52
RPRD1B-203ENST00000462548 HSP90B1P14625 803 aaKnown RBP18.31■□□□□ 0.52
RPRD1B-203ENST00000462548 VGLL2Q8N8G2 317 aa18.31■□□□□ 0.52
RPRD1B-203ENST00000462548 RGPD3A6NKT7 1758 aaPredicted RBP18.31■□□□□ 0.52
RPRD1B-203ENST00000462548 RGPD4Q7Z3J3 1758 aa18.31■□□□□ 0.52
RPRD1B-203ENST00000462548 TAF1P21675 1872 aa18.31■□□□□ 0.52
RPRD1B-203ENST00000462548 METTL24Q5JXM2 366 aa18.3■□□□□ 0.52
RPRD1B-203ENST00000462548 CARMIL3Q8ND23 1372 aa18.3■□□□□ 0.52
RPRD1B-203ENST00000462548 ATP5JP18859 108 aa18.3■□□□□ 0.52
RPRD1B-203ENST00000462548 ADORA1P30542 326 aa18.3■□□□□ 0.52
RPRD1B-203ENST00000462548 TPTE2Q6XPS3 522 aa18.3■□□□□ 0.52
RPRD1B-203ENST00000462548 CNTROBQ8N137 903 aa18.3■□□□□ 0.52
RPRD1B-203ENST00000462548 TFCP2L1Q9NZI6 479 aa18.3■□□□□ 0.52
RPRD1B-203ENST00000462548 TNRC6CQ9HCJ0 1690 aaKnown RBP18.29■□□□□ 0.52
RPRD1B-203ENST00000462548 IL25Q9H293 177 aa18.29■□□□□ 0.52
RPRD1B-203ENST00000462548 NDUFB9Q9Y6M9 179 aa18.29■□□□□ 0.52
RPRD1B-203ENST00000462548 COL23A1Q86Y22 540 aaPredicted RBP18.29■□□□□ 0.52
RPRD1B-203ENST00000462548 EDC3Q96F86 508 aaKnown RBP18.29■□□□□ 0.52
RPRD1B-203ENST00000462548 IPO9Q96P70 1041 aaKnown RBP18.29■□□□□ 0.52
RPRD1B-203ENST00000462548 TM4SF1P30408 202 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms