RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 F6X3S4 739 aa23.59■■□□□ 1.37
CDKN1A-206ENST00000462537 PDE8AO60658 829 aa23.59■■□□□ 1.37
CDKN1A-206ENST00000462537 IARSP41252 1262 aaKnown RBP23.59■■□□□ 1.37
CDKN1A-206ENST00000462537 C1QTNF8P60827 252 aa23.59■■□□□ 1.37
CDKN1A-206ENST00000462537 CDHR2Q9BYE9 1310 aa23.59■■□□□ 1.37
CDKN1A-206ENST00000462537 GLTPD2A6NH11 291 aa23.58■■□□□ 1.37
CDKN1A-206ENST00000462537 DPY19L2Q6NUT2 758 aa23.58■■□□□ 1.37
CDKN1A-206ENST00000462537 SP8Q8IXZ3 490 aa23.58■■□□□ 1.37
CDKN1A-206ENST00000462537 LINS1Q8NG48 757 aa23.58■■□□□ 1.37
CDKN1A-206ENST00000462537 KIF3CO14782 793 aa23.57■■□□□ 1.36
CDKN1A-206ENST00000462537 GCKRQ14397 625 aa23.57■■□□□ 1.36
CDKN1A-206ENST00000462537 CCDC152Q4G0S7 254 aa23.57■■□□□ 1.36
CDKN1A-206ENST00000462537 UBE3BQ7Z3V4 1068 aa23.57■■□□□ 1.36
CDKN1A-206ENST00000462537 CELF1Q92879 486 aaKnown RBP23.57■■□□□ 1.36
CDKN1A-206ENST00000462537 CCDC85AQ96PX6 553 aaPredicted RBP23.57■■□□□ 1.36
CDKN1A-206ENST00000462537 MYH3P11055 1940 aa23.57■■□□□ 1.36
CDKN1A-206ENST00000462537 TMC4Q7Z404 712 aa23.56■■□□□ 1.36
CDKN1A-206ENST00000462537 TRMT2AQ8IZ69 625 aaKnown RBP23.56■■□□□ 1.36
CDKN1A-206ENST00000462537 RRAGCQ9HB90 399 aa23.56■■□□□ 1.36
CDKN1A-206ENST00000462537 HNRNPUQ00839 825 aaKnown RBP eCLIP23.55■■□□□ 1.36
CDKN1A-206ENST00000462537 DPP8Q6V1X1 898 aaPredicted RBP23.55■■□□□ 1.36
CDKN1A-206ENST00000462537 MRPL50Q8N5N7 158 aaKnown RBP23.55■■□□□ 1.36
CDKN1A-206ENST00000462537 COL4A1P02462 1669 aa23.54■■□□□ 1.36
CDKN1A-206ENST00000462537 LRRC37AA6NMS7 1700 aa23.54■■□□□ 1.36
CDKN1A-206ENST00000462537 CTSWP56202 376 aa23.54■■□□□ 1.36
CDKN1A-206ENST00000462537 SLC4A10Q6U841 1118 aa23.54■■□□□ 1.36
CDKN1A-206ENST00000462537 C16orf71Q8IYS4 520 aaPredicted RBP23.54■■□□□ 1.36
CDKN1A-206ENST00000462537 MPNDQ8N594 471 aa23.54■■□□□ 1.36
CDKN1A-206ENST00000462537 JDP2Q8WYK2 163 aa23.54■■□□□ 1.36
CDKN1A-206ENST00000462537 BCL2L13Q9BXK5 485 aa23.54■■□□□ 1.36
CDKN1A-206ENST00000462537 SEC31BQ9NQW1 1179 aa23.54■■□□□ 1.36
CDKN1A-206ENST00000462537 H7C1W4 665 aa23.53■■□□□ 1.36
CDKN1A-206ENST00000462537 BEND3Q5T5X7 828 aa23.53■■□□□ 1.36
CDKN1A-206ENST00000462537 SUPT20HQ8NEM7 779 aa23.53■■□□□ 1.36
CDKN1A-206ENST00000462537 SSH1Q8WYL5 1049 aa23.53■■□□□ 1.36
CDKN1A-206ENST00000462537 RPS8P62241 208 aaKnown RBP23.52■■□□□ 1.36
CDKN1A-206ENST00000462537 LARGE2Q8N3Y3 721 aa23.52■■□□□ 1.36
CDKN1A-206ENST00000462537 PPIP5K2O43314 1243 aa23.51■■□□□ 1.35
CDKN1A-206ENST00000462537 ALDH1L2Q3SY69 923 aa23.51■■□□□ 1.35
CDKN1A-206ENST00000462537 SMC4Q9NTJ3 1288 aa23.51■■□□□ 1.35
CDKN1A-206ENST00000462537 WDR90Q96KV7 1748 aa23.5■■□□□ 1.35
CDKN1A-206ENST00000462537 DDNO94850 711 aaPredicted RBP23.5■■□□□ 1.35
CDKN1A-206ENST00000462537 CT47B1P0C2W7 299 aaPredicted RBP23.5■■□□□ 1.35
CDKN1A-206ENST00000462537 AOC3Q16853 763 aa23.5■■□□□ 1.35
CDKN1A-206ENST00000462537 PTPRCP08575 1304 aa23.5■■□□□ 1.35
CDKN1A-206ENST00000462537 SPEF2Q9C093 1822 aa23.49■■□□□ 1.35
CDKN1A-206ENST00000462537 COL4A5P29400 1685 aa23.49■■□□□ 1.35
CDKN1A-206ENST00000462537 TOMM70O94826 608 aa23.49■■□□□ 1.35
CDKN1A-206ENST00000462537 VEGFAP15692 232 aaPredicted RBP23.49■■□□□ 1.35
CDKN1A-206ENST00000462537 ANKRD18AQ8IVF6 992 aa23.49■■□□□ 1.35
CDKN1A-206ENST00000462537 NIM1KQ8IY84 436 aa23.49■■□□□ 1.35
CDKN1A-206ENST00000462537 TTLL11Q8NHH1 800 aa23.49■■□□□ 1.35
CDKN1A-206ENST00000462537 RTFDC1Q9BY42 306 aaPredicted RBP23.49■■□□□ 1.35
CDKN1A-206ENST00000462537 SRCIN1Q9C0H9 1055 aa23.49■■□□□ 1.35
CDKN1A-206ENST00000462537 NSFL1CQ9UNZ2 370 aaKnown RBP23.49■■□□□ 1.35
CDKN1A-206ENST00000462537 ZNF541Q9H0D2 1346 aa23.49■■□□□ 1.35
CDKN1A-206ENST00000462537 CASP7P55210 303 aa23.48■■□□□ 1.35
CDKN1A-206ENST00000462537 CDC5LQ99459 802 aaKnown RBP23.48■■□□□ 1.35
CDKN1A-206ENST00000462537 VPS33BQ9H267 617 aa23.48■■□□□ 1.35
CDKN1A-206ENST00000462537 GREM2Q9H772 168 aa23.48■■□□□ 1.35
CDKN1A-206ENST00000462537 FZD9O00144 591 aa23.47■■□□□ 1.35
CDKN1A-206ENST00000462537 EIF6P56537 245 aaKnown RBP23.47■■□□□ 1.35
CDKN1A-206ENST00000462537 PLA2G12BQ9BX93 195 aa23.47■■□□□ 1.35
CDKN1A-206ENST00000462537 C9orf78Q9NZ63 289 aaPredicted RBP23.47■■□□□ 1.35
CDKN1A-206ENST00000462537 DUOX1Q9NRD9 1551 aa23.47■■□□□ 1.35
CDKN1A-206ENST00000462537 ALDH1L1O75891 902 aa23.46■■□□□ 1.35
CDKN1A-206ENST00000462537 GPSM2P81274 684 aa23.46■■□□□ 1.35
CDKN1A-206ENST00000462537 C6orf229H3BNL8 230 aa23.45■■□□□ 1.34
CDKN1A-206ENST00000462537 GRM8O00222 908 aa23.45■■□□□ 1.34
CDKN1A-206ENST00000462537 ANKIB1Q9P2G1 1089 aa23.45■■□□□ 1.34
CDKN1A-206ENST00000462537 RTL9Q8NET4 1388 aa23.44■■□□□ 1.34
CDKN1A-206ENST00000462537 LTBP1Q14766 1721 aa23.43■■□□□ 1.34
CDKN1A-206ENST00000462537 KIAA2012Q0VF49 1180 aa23.43■■□□□ 1.34
CDKN1A-206ENST00000462537 FAM161AQ3B820 660 aa23.43■■□□□ 1.34
CDKN1A-206ENST00000462537 RBM46Q8TBY0 533 aaKnown RBP23.43■■□□□ 1.34
CDKN1A-206ENST00000462537 CHMP3Q9Y3E7 222 aa23.43■■□□□ 1.34
CDKN1A-206ENST00000462537 GJA3Q9Y6H8 435 aa23.43■■□□□ 1.34
CDKN1A-206ENST00000462537 POTECB2RU33 542 aa23.42■■□□□ 1.34
CDKN1A-206ENST00000462537 ITGA6P23229 1130 aa23.42■■□□□ 1.34
CDKN1A-206ENST00000462537 WASHC4Q2M389 1173 aa23.42■■□□□ 1.34
CDKN1A-206ENST00000462537 GPC2Q8N158 579 aa23.42■■□□□ 1.34
CDKN1A-206ENST00000462537 EYA3Q99504 573 aa23.42■■□□□ 1.34
CDKN1A-206ENST00000462537 POLLQ9UGP5 575 aa23.42■■□□□ 1.34
CDKN1A-206ENST00000462537 SCN4AP35499 1836 aa23.42■■□□□ 1.34
CDKN1A-206ENST00000462537 IQCA1LA6NCM1 817 aa23.41■■□□□ 1.34
CDKN1A-206ENST00000462537 RIMBP2O15034 1052 aa23.41■■□□□ 1.34
CDKN1A-206ENST00000462537 IGHMBP2P38935 993 aaKnown RBP23.41■■□□□ 1.34
CDKN1A-206ENST00000462537 L3MBTL3Q96JM7 780 aaPredicted RBP23.41■■□□□ 1.34
CDKN1A-206ENST00000462537 ZNRF3Q9ULT6 936 aa23.41■■□□□ 1.34
CDKN1A-206ENST00000462537 UFL1O94874 794 aa23.4■■□□□ 1.34
CDKN1A-206ENST00000462537 CSF1RP07333 972 aa23.4■■□□□ 1.34
CDKN1A-206ENST00000462537 RARSP54136 660 aaKnown RBP23.4■■□□□ 1.34
CDKN1A-206ENST00000462537 FOXO4P98177 505 aa23.4■■□□□ 1.34
CDKN1A-206ENST00000462537 TBC1D16Q8TBP0 767 aa23.4■■□□□ 1.34
CDKN1A-206ENST00000462537 BSDC1Q9NW68 430 aaPredicted RBP23.4■■□□□ 1.34
CDKN1A-206ENST00000462537 GGA1Q9UJY5 639 aa23.4■■□□□ 1.34
CDKN1A-206ENST00000462537 NOB1Q9ULX3 412 aaKnown RBP23.4■■□□□ 1.34
CDKN1A-206ENST00000462537 XDHP47989 1333 aa23.39■■□□□ 1.34
CDKN1A-206ENST00000462537 ANKRD18BA2A2Z9 1011 aa23.39■■□□□ 1.33
CDKN1A-206ENST00000462537 GPR101Q96P66 508 aaPredicted RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms