RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 NMRK2Q9NPI5 230 aa11.36□□□□□ -0.59
DDX39B-216ENST00000462421 ANKIB1Q9P2G1 1089 aa11.36□□□□□ -0.59
DDX39B-216ENST00000462421 BRCA1P38398 1863 aaKnown RBP11.36□□□□□ -0.59
DDX39B-216ENST00000462421 UTRNP46939 3433 aa11.35□□□□□ -0.59
DDX39B-216ENST00000462421 NUP98P52948 1817 aa11.35□□□□□ -0.59
DDX39B-216ENST00000462421 C6orf229H3BNL8 230 aa11.35□□□□□ -0.59
DDX39B-216ENST00000462421 IGHMBP2P38935 993 aaKnown RBP11.35□□□□□ -0.59
DDX39B-216ENST00000462421 TAF7LQ5H9L4 462 aa11.35□□□□□ -0.59
DDX39B-216ENST00000462421 ANKRD18AQ8IVF6 992 aa11.35□□□□□ -0.59
DDX39B-216ENST00000462421 SP8Q8IXZ3 490 aa11.35□□□□□ -0.59
DDX39B-216ENST00000462421 CLEC11AQ9Y240 323 aa11.35□□□□□ -0.59
DDX39B-216ENST00000462421 CHMP3Q9Y3E7 222 aa11.35□□□□□ -0.59
DDX39B-216ENST00000462421 GJA3Q9Y6H8 435 aa11.35□□□□□ -0.59
DDX39B-216ENST00000462421 COL11A2P13942 1736 aaPredicted RBP11.35□□□□□ -0.59
DDX39B-216ENST00000462421 APLP1P51693 650 aa11.34□□□□□ -0.59
DDX39B-216ENST00000462421 SLC4A10Q6U841 1118 aa11.34□□□□□ -0.59
DDX39B-216ENST00000462421 C9orf78Q9NZ63 289 aaPredicted RBP11.34□□□□□ -0.59
DDX39B-216ENST00000462421 NSFL1CQ9UNZ2 370 aaKnown RBP11.34□□□□□ -0.59
DDX39B-216ENST00000462421 ANKRD31Q8N7Z5 1873 aa11.34□□□□□ -0.59
DDX39B-216ENST00000462421 KIF3CO14782 793 aa11.33□□□□□ -0.6
DDX39B-216ENST00000462421 VAMP4O75379 141 aa11.33□□□□□ -0.6
DDX39B-216ENST00000462421 HSPA6P17066 643 aa11.33□□□□□ -0.6
DDX39B-216ENST00000462421 KCNJ4P48050 445 aa11.33□□□□□ -0.6
DDX39B-216ENST00000462421 TNIP1Q15025 636 aa11.33□□□□□ -0.6
DDX39B-216ENST00000462421 SF3B3Q15393 1217 aaKnown RBP11.33□□□□□ -0.6
DDX39B-216ENST00000462421 EAPPQ56P03 285 aaPredicted RBP11.33□□□□□ -0.6
DDX39B-216ENST00000462421 UBE3BQ7Z3V4 1068 aa11.33□□□□□ -0.6
DDX39B-216ENST00000462421 PNMA8AQ86V59 439 aaPredicted RBP11.33□□□□□ -0.6
DDX39B-216ENST00000462421 GPC2Q8N158 579 aa11.33□□□□□ -0.6
DDX39B-216ENST00000462421 LINS1Q8NG48 757 aa11.33□□□□□ -0.6
DDX39B-216ENST00000462421 MPHOSPH8Q99549 860 aa11.33□□□□□ -0.6
DDX39B-216ENST00000462421 BCL2L13Q9BXK5 485 aa11.33□□□□□ -0.6
DDX39B-216ENST00000462421 HACL1Q9UJ83 578 aa11.33□□□□□ -0.6
DDX39B-216ENST00000462421 CDHR2Q9BYE9 1310 aa11.33□□□□□ -0.6
DDX39B-216ENST00000462421 ANKRD36CQ5JPF3 1778 aa11.32□□□□□ -0.6
DDX39B-216ENST00000462421 NEURL1BA8MQ27 555 aa11.32□□□□□ -0.6
DDX39B-216ENST00000462421 CTSWP56202 376 aa11.32□□□□□ -0.6
DDX39B-216ENST00000462421 RPS8P62241 208 aaKnown RBP11.32□□□□□ -0.6
DDX39B-216ENST00000462421 WASHC4Q2M389 1173 aa11.32□□□□□ -0.6
DDX39B-216ENST00000462421 C7orf43Q8WVR3 580 aa11.32□□□□□ -0.6
DDX39B-216ENST00000462421 CCDC85AQ96PX6 553 aaPredicted RBP11.32□□□□□ -0.6
DDX39B-216ENST00000462421 ZC3H12CQ9C0D7 883 aaKnown RBP11.32□□□□□ -0.6
DDX39B-216ENST00000462421 SMC4Q9NTJ3 1288 aa11.32□□□□□ -0.6
DDX39B-216ENST00000462421 GGA1Q9UJY5 639 aa11.32□□□□□ -0.6
DDX39B-216ENST00000462421 HDAC5Q9UQL6 1122 aa11.32□□□□□ -0.6
DDX39B-216ENST00000462421 TNRC6CQ9HCJ0 1690 aaKnown RBP11.31□□□□□ -0.6
DDX39B-216ENST00000462421 DDNO94850 711 aaPredicted RBP11.31□□□□□ -0.6
DDX39B-216ENST00000462421 CT47B1P0C2W7 299 aaPredicted RBP11.31□□□□□ -0.6
DDX39B-216ENST00000462421 AOC3Q16853 763 aa11.31□□□□□ -0.6
DDX39B-216ENST00000462421 CWF19L2Q2TBE0 894 aaKnown RBP11.31□□□□□ -0.6
DDX39B-216ENST00000462421 OLFM4Q6UX06 510 aa11.31□□□□□ -0.6
DDX39B-216ENST00000462421 SRCIN1Q9C0H9 1055 aa11.31□□□□□ -0.6
DDX39B-216ENST00000462421 PTPRCP08575 1304 aa11.31□□□□□ -0.6
DDX39B-216ENST00000462421 ARFGEF2Q9Y6D5 1785 aa11.31□□□□□ -0.6
DDX39B-216ENST00000462421 TIAM2Q8IVF5 1701 aa11.3□□□□□ -0.6
DDX39B-216ENST00000462421 ANKRD18BA2A2Z9 1011 aa11.3□□□□□ -0.6
DDX39B-216ENST00000462421 UFL1O94874 794 aa11.3□□□□□ -0.6
DDX39B-216ENST00000462421 GCKRQ14397 625 aa11.3□□□□□ -0.6
DDX39B-216ENST00000462421 C3orf67Q6ZVT6 689 aa11.3□□□□□ -0.6
DDX39B-216ENST00000462421 ZNRF3Q9ULT6 936 aa11.3□□□□□ -0.6
DDX39B-216ENST00000462421 CACNA1SQ13698 1873 aa11.29□□□□□ -0.6
DDX39B-216ENST00000462421 ALDH1L1O75891 902 aa11.29□□□□□ -0.6
DDX39B-216ENST00000462421 IFIT5Q13325 482 aaKnown RBP11.29□□□□□ -0.6
DDX39B-216ENST00000462421 CCDC57Q2TAC2 916 aa11.29□□□□□ -0.6
DDX39B-216ENST00000462421 CIAPIN1Q6FI81 312 aa11.29□□□□□ -0.6
DDX39B-216ENST00000462421 G2E3Q7L622 706 aa11.29□□□□□ -0.6
DDX39B-216ENST00000462421 LDHDQ86WU2 507 aa11.29□□□□□ -0.6
DDX39B-216ENST00000462421 ANKRD2Q9GZV1 360 aa11.29□□□□□ -0.6
DDX39B-216ENST00000462421 PLSCR2Q9NRY7 297 aa11.29□□□□□ -0.6
DDX39B-216ENST00000462421 SLX4Q8IY92 1834 aa11.29□□□□□ -0.6
DDX39B-216ENST00000462421 XDHP47989 1333 aa11.29□□□□□ -0.6
DDX39B-216ENST00000462421 FZD9O00144 591 aa11.28□□□□□ -0.6
DDX39B-216ENST00000462421 RIMBP2O15034 1052 aa11.28□□□□□ -0.6
DDX39B-216ENST00000462421 ATP2B4P23634 1241 aa11.28□□□□□ -0.6
DDX39B-216ENST00000462421 EPHX2P34913 555 aa11.28□□□□□ -0.6
DDX39B-216ENST00000462421 HNRNPUQ00839 825 aaKnown RBP eCLIP11.28□□□□□ -0.6
DDX39B-216ENST00000462421 KIAA2012Q0VF49 1180 aa11.28□□□□□ -0.6
DDX39B-216ENST00000462421 ALDH1L2Q3SY69 923 aa11.28□□□□□ -0.6
DDX39B-216ENST00000462421 CHADLQ6NUI6 762 aa11.28□□□□□ -0.6
DDX39B-216ENST00000462421 JARID2Q92833 1246 aaPredicted RBP11.28□□□□□ -0.6
DDX39B-216ENST00000462421 CELF1Q92879 486 aaKnown RBP11.28□□□□□ -0.6
DDX39B-216ENST00000462421 L3MBTL3Q96JM7 780 aaPredicted RBP11.28□□□□□ -0.6
DDX39B-216ENST00000462421 RTFDC1Q9BY42 306 aaPredicted RBP11.28□□□□□ -0.6
DDX39B-216ENST00000462421 ZNF541Q9H0D2 1346 aa11.28□□□□□ -0.6
DDX39B-216ENST00000462421 F6X3S4 739 aa11.27□□□□□ -0.61
DDX39B-216ENST00000462421 H7C1D1 291 aa11.27□□□□□ -0.61
DDX39B-216ENST00000462421 IGKV5-2P06315 115 aa11.27□□□□□ -0.61
DDX39B-216ENST00000462421 SLFN5Q08AF3 891 aa11.27□□□□□ -0.61
DDX39B-216ENST00000462421 FBXW7Q969H0 707 aa11.27□□□□□ -0.61
DDX39B-216ENST00000462421 FER1L6Q2WGJ9 1857 aa11.26□□□□□ -0.61
DDX39B-216ENST00000462421 H7C1W4 665 aa11.26□□□□□ -0.61
DDX39B-216ENST00000462421 GRM8O00222 908 aa11.26□□□□□ -0.61
DDX39B-216ENST00000462421 IPO8O15397 1037 aaKnown RBP11.26□□□□□ -0.61
DDX39B-216ENST00000462421 ITGA6P23229 1130 aa11.26□□□□□ -0.61
DDX39B-216ENST00000462421 GPSM2P81274 684 aa11.26□□□□□ -0.61
DDX39B-216ENST00000462421 API5Q9BZZ5 524 aaKnown RBP11.26□□□□□ -0.61
DDX39B-216ENST00000462421 TAF1DQ9H5J8 278 aaPredicted RBP11.26□□□□□ -0.61
DDX39B-216ENST00000462421 SEC31BQ9NQW1 1179 aa11.26□□□□□ -0.61
DDX39B-216ENST00000462421 CNNM1Q9NRU3 951 aa11.26□□□□□ -0.61
DDX39B-216ENST00000462421 BSDC1Q9NW68 430 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms