RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 USP19O94966 1318 aa8.06□□□□□ -1.12
VPS36-202ENST00000462289 ACEP12821 1306 aa8.06□□□□□ -1.12
VPS36-202ENST00000462289 LMO7Q8WWI1 1683 aa8.06□□□□□ -1.12
VPS36-202ENST00000462289 FIGNL2A6NMB9 653 aa8.06□□□□□ -1.12
VPS36-202ENST00000462289 SOCS7O14512 581 aa8.06□□□□□ -1.12
VPS36-202ENST00000462289 ADH1AP07327 375 aa8.06□□□□□ -1.12
VPS36-202ENST00000462289 EIF4G2P78344 907 aaKnown RBP eCLIP8.06□□□□□ -1.12
VPS36-202ENST00000462289 RELBQ01201 579 aa8.06□□□□□ -1.12
VPS36-202ENST00000462289 RNF217Q8TC41 542 aa8.06□□□□□ -1.12
VPS36-202ENST00000462289 INSM2Q96T92 566 aaPredicted RBP8.06□□□□□ -1.12
VPS36-202ENST00000462289 ARHGEF10O15013 1369 aa8.06□□□□□ -1.12
VPS36-202ENST00000462289 NRAPQ86VF7 1730 aa8.06□□□□□ -1.12
VPS36-202ENST00000462289 EDC4Q6P2E9 1401 aaKnown RBP8.05□□□□□ -1.12
VPS36-202ENST00000462289 NFAT5O94916 1531 aa8.05□□□□□ -1.12
VPS36-202ENST00000462289 ABCC6O95255 1503 aa8.05□□□□□ -1.12
VPS36-202ENST00000462289 ZBBXA8MT70 800 aa8.05□□□□□ -1.12
VPS36-202ENST00000462289 HSPA5P11021 654 aaKnown RBP8.05□□□□□ -1.12
VPS36-202ENST00000462289 ADD1P35611 737 aaKnown RBP8.05□□□□□ -1.12
VPS36-202ENST00000462289 CCDC155Q8N6L0 562 aa8.05□□□□□ -1.12
VPS36-202ENST00000462289 GPR161Q8N6U8 529 aaKnown RBP8.05□□□□□ -1.12
VPS36-202ENST00000462289 IL27Q8NEV9 243 aa8.05□□□□□ -1.12
VPS36-202ENST00000462289 A0A1W2PP64 1363 aa8.05□□□□□ -1.12
VPS36-202ENST00000462289 USP31Q70CQ4 1352 aa8.05□□□□□ -1.12
VPS36-202ENST00000462289 ANKRD36BQ8N2N9 1353 aa8.05□□□□□ -1.12
VPS36-202ENST00000462289 KIF20BQ96Q89 1820 aa8.05□□□□□ -1.12
VPS36-202ENST00000462289 OVOS2A0A0J9YW53 1432 aa8.04□□□□□ -1.12
VPS36-202ENST00000462289 OVOS2Q6IE36 1432 aa8.04□□□□□ -1.12
VPS36-202ENST00000462289 BRPF1P55201 1214 aaPredicted RBP8.04□□□□□ -1.12
VPS36-202ENST00000462289 KRT76Q01546 638 aa8.04□□□□□ -1.12
VPS36-202ENST00000462289 KRT28Q7Z3Y7 464 aa8.04□□□□□ -1.12
VPS36-202ENST00000462289 CABP1Q9NZU7 370 aa8.04□□□□□ -1.12
VPS36-202ENST00000462289 PLCH1Q4KWH8 1693 aa8.04□□□□□ -1.12
VPS36-202ENST00000462289 SLIT2O94813 1529 aa8.03□□□□□ -1.12
VPS36-202ENST00000462289 COL14A1Q05707 1796 aaKnown RBP8.03□□□□□ -1.12
VPS36-202ENST00000462289 CPDO75976 1380 aa8.03□□□□□ -1.12
VPS36-202ENST00000462289 FBXO45P0C2W1 286 aa8.03□□□□□ -1.12
VPS36-202ENST00000462289 PTGIRP43119 386 aa8.03□□□□□ -1.12
VPS36-202ENST00000462289 RAB15P59190 212 aa8.03□□□□□ -1.12
VPS36-202ENST00000462289 SRPK2P78362 688 aaKnown RBP8.03□□□□□ -1.12
VPS36-202ENST00000462289 TMF1P82094 1093 aa8.03□□□□□ -1.12
VPS36-202ENST00000462289 CDCA8Q53HL2 280 aa8.03□□□□□ -1.12
VPS36-202ENST00000462289 FOXD4L5Q5VV16 416 aaPredicted RBP8.03□□□□□ -1.12
VPS36-202ENST00000462289 CCDC125Q86Z20 511 aa8.03□□□□□ -1.12
VPS36-202ENST00000462289 PMFBP1Q8TBY8 1022 aa8.03□□□□□ -1.12
VPS36-202ENST00000462289 ZNF395Q9H8N7 513 aaPredicted RBP8.03□□□□□ -1.12
VPS36-202ENST00000462289 TTC21AQ8NDW8 1320 aa8.03□□□□□ -1.12
VPS36-202ENST00000462289 SENP3-EIF4A1A0A087X0R7 540 aa8.02□□□□□ -1.13
VPS36-202ENST00000462289 ITGA6P23229 1130 aa8.02□□□□□ -1.13
VPS36-202ENST00000462289 PSME1Q06323 249 aa8.02□□□□□ -1.13
VPS36-202ENST00000462289 BANK1Q8NDB2 785 aa8.02□□□□□ -1.13
VPS36-202ENST00000462289 SLC12A5Q9H2X9 1139 aa8.02□□□□□ -1.13
VPS36-202ENST00000462289 POLMQ9NP87 494 aaPredicted RBP8.02□□□□□ -1.13
VPS36-202ENST00000462289 GPR37L1O60883 481 aa8.01□□□□□ -1.13
VPS36-202ENST00000462289 RGS17Q9UGC6 210 aaPredicted RBP8.01□□□□□ -1.13
VPS36-202ENST00000462289 LTN1O94822 1766 aa8.01□□□□□ -1.13
VPS36-202ENST00000462289 TTC21BQ7Z4L5 1316 aa8.01□□□□□ -1.13
VPS36-202ENST00000462289 BCL9LQ86UU0 1499 aa8□□□□□ -1.13
VPS36-202ENST00000462289 KTN1Q86UP2 1357 aaKnown RBP8□□□□□ -1.13
VPS36-202ENST00000462289 CCDC7Q96M83 1385 aa8□□□□□ -1.13
VPS36-202ENST00000462289 GIGYF1O75420 1035 aaPredicted RBP8□□□□□ -1.13
VPS36-202ENST00000462289 MCCD1P59942 119 aaPredicted RBP8□□□□□ -1.13
VPS36-202ENST00000462289 XPCQ01831 940 aaPredicted RBP8□□□□□ -1.13
VPS36-202ENST00000462289 FNBP4Q8N3X1 1017 aaPredicted RBP8□□□□□ -1.13
VPS36-202ENST00000462289 NGDNQ8NEJ9 315 aaKnown RBP8□□□□□ -1.13
VPS36-202ENST00000462289 KIF7Q2M1P5 1343 aa8□□□□□ -1.13
VPS36-202ENST00000462289 RGPD5Q99666 1765 aa7.99□□□□□ -1.13
VPS36-202ENST00000462289 RNF144AP50876 292 aaPredicted RBP7.99□□□□□ -1.13
VPS36-202ENST00000462289 COL25A1Q9BXS0 654 aaPredicted RBP7.99□□□□□ -1.13
VPS36-202ENST00000462289 CYLDQ9NQC7 956 aa7.99□□□□□ -1.13
VPS36-202ENST00000462289 PCDHB9Q9Y5E1 797 aa7.99□□□□□ -1.13
VPS36-202ENST00000462289 WASHC2AQ641Q2 1341 aa7.99□□□□□ -1.13
VPS36-202ENST00000462289 NPC1L1Q9UHC9 1359 aa7.98□□□□□ -1.13
VPS36-202ENST00000462289 ATRNO75882 1429 aa7.98□□□□□ -1.13
VPS36-202ENST00000462289 ZEB1P37275 1124 aaPredicted RBP7.98□□□□□ -1.13
VPS36-202ENST00000462289 ERVK-9P63128 1117 aa7.98□□□□□ -1.13
VPS36-202ENST00000462289 NR1H3Q13133 447 aa7.98□□□□□ -1.13
VPS36-202ENST00000462289 MTMR14Q8NCE2 650 aa7.98□□□□□ -1.13
VPS36-202ENST00000462289 CNTNAP3BQ96NU0 1288 aa7.98□□□□□ -1.13
VPS36-202ENST00000462289 CNTNAP3Q9BZ76 1288 aa7.98□□□□□ -1.13
VPS36-202ENST00000462289 TERF2IPQ9NYB0 399 aa7.98□□□□□ -1.13
VPS36-202ENST00000462289 CDK12Q9NYV4 1490 aaPredicted RBP7.98□□□□□ -1.13
VPS36-202ENST00000462289 MAP2P11137 1827 aaKnown RBP7.98□□□□□ -1.13
VPS36-202ENST00000462289 WNK3Q9BYP7 1800 aa7.98□□□□□ -1.13
VPS36-202ENST00000462289 CAMTA1Q9Y6Y1 1673 aa7.98□□□□□ -1.13
VPS36-202ENST00000462289 GLI3P10071 1580 aa7.97□□□□□ -1.13
VPS36-202ENST00000462289 ATP5J2-PTCD1G3V325 749 aa7.97□□□□□ -1.13
VPS36-202ENST00000462289 GPC1P35052 558 aa7.97□□□□□ -1.13
VPS36-202ENST00000462289 RNFT1Q5M7Z0 435 aa7.97□□□□□ -1.13
VPS36-202ENST00000462289 LYSMD3Q7Z3D4 306 aa7.97□□□□□ -1.13
VPS36-202ENST00000462289 ZNF592Q92610 1267 aa7.97□□□□□ -1.13
VPS36-202ENST00000462289 FAM208AQ9UK61 1670 aaKnown RBP7.97□□□□□ -1.13
VPS36-202ENST00000462289 PEAK1Q9H792 1746 aa7.97□□□□□ -1.13
VPS36-202ENST00000462289 NSD2O96028 1365 aa7.97□□□□□ -1.13
VPS36-202ENST00000462289 AATKQ6ZMQ8 1374 aa7.97□□□□□ -1.13
VPS36-202ENST00000462289 SMG6Q86US8 1419 aaKnown RBP7.96□□□□□ -1.13
VPS36-202ENST00000462289 THSD7AQ9UPZ6 1657 aa7.96□□□□□ -1.13
VPS36-202ENST00000462289 FYB1O15117 783 aa7.96□□□□□ -1.14
VPS36-202ENST00000462289 RNF20Q5VTR2 975 aa7.96□□□□□ -1.14
VPS36-202ENST00000462289 SV2AQ7L0J3 742 aa7.96□□□□□ -1.14
VPS36-202ENST00000462289 HDGFL2Q7Z4V5 671 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms