RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 PCCAP05165 728 aaPredicted RBP16.98■□□□□ 0.31
C9orf3-210ENST00000462125 HSP90B1P14625 803 aaKnown RBP16.98■□□□□ 0.31
C9orf3-210ENST00000462125 RTL5Q5HYW3 569 aaPredicted RBP16.98■□□□□ 0.31
C9orf3-210ENST00000462125 G2E3Q7L622 706 aa16.98■□□□□ 0.31
C9orf3-210ENST00000462125 SPINK5Q9NQ38 1064 aaPredicted RBP16.98■□□□□ 0.31
C9orf3-210ENST00000462125 CWC25Q9NXE8 425 aaPredicted RBP16.98■□□□□ 0.31
C9orf3-210ENST00000462125 MAP3K2Q9Y2U5 619 aa16.98■□□□□ 0.31
C9orf3-210ENST00000462125 ZNF541Q9H0D2 1346 aa16.97■□□□□ 0.31
C9orf3-210ENST00000462125 GPC2Q8N158 579 aa16.97■□□□□ 0.31
C9orf3-210ENST00000462125 LARGE2Q8N3Y3 721 aa16.97■□□□□ 0.31
C9orf3-210ENST00000462125 MPNDQ8N594 471 aa16.97■□□□□ 0.31
C9orf3-210ENST00000462125 DNAJC5GQ8N7S2 189 aa16.97■□□□□ 0.31
C9orf3-210ENST00000462125 SUPT20HQ8NEM7 779 aa16.97■□□□□ 0.31
C9orf3-210ENST00000462125 IGKV5-2P06315 115 aa16.96■□□□□ 0.31
C9orf3-210ENST00000462125 EXOSC9Q06265 439 aaKnown RBP16.96■□□□□ 0.31
C9orf3-210ENST00000462125 CELF1Q92879 486 aaKnown RBP16.96■□□□□ 0.31
C9orf3-210ENST00000462125 TAF1DQ9H5J8 278 aaPredicted RBP16.96■□□□□ 0.31
C9orf3-210ENST00000462125 ZNF521Q96K83 1311 aa16.96■□□□□ 0.3
C9orf3-210ENST00000462125 LAMB2P55268 1798 aa16.95■□□□□ 0.3
C9orf3-210ENST00000462125 PDE8AO60658 829 aa16.95■□□□□ 0.3
C9orf3-210ENST00000462125 DPP8Q6V1X1 898 aaPredicted RBP16.95■□□□□ 0.3
C9orf3-210ENST00000462125 COL4A5P29400 1685 aa16.94■□□□□ 0.3
C9orf3-210ENST00000462125 DDX60Q8IY21 1712 aaKnown RBP16.94■□□□□ 0.3
C9orf3-210ENST00000462125 PPIP5K2O43314 1243 aa16.94■□□□□ 0.3
C9orf3-210ENST00000462125 EIF6P56537 245 aaKnown RBP16.94■□□□□ 0.3
C9orf3-210ENST00000462125 RPS8P62241 208 aaKnown RBP16.94■□□□□ 0.3
C9orf3-210ENST00000462125 HTRA3P83110 453 aa16.94■□□□□ 0.3
C9orf3-210ENST00000462125 FLIIQ13045 1269 aa16.94■□□□□ 0.3
C9orf3-210ENST00000462125 COL13A1Q5TAT6 717 aaPredicted RBP16.94■□□□□ 0.3
C9orf3-210ENST00000462125 MYH16Q9H6N6 1097 aa16.94■□□□□ 0.3
C9orf3-210ENST00000462125 CDHR2Q9BYE9 1310 aa16.94■□□□□ 0.3
C9orf3-210ENST00000462125 KIAA2012Q0VF49 1180 aa16.93■□□□□ 0.3
C9orf3-210ENST00000462125 NEXNQ0ZGT2 675 aa16.93■□□□□ 0.3
C9orf3-210ENST00000462125 AOC3Q16853 763 aa16.93■□□□□ 0.3
C9orf3-210ENST00000462125 CHADLQ6NUI6 762 aa16.93■□□□□ 0.3
C9orf3-210ENST00000462125 NIM1KQ8IY84 436 aa16.93■□□□□ 0.3
C9orf3-210ENST00000462125 HACL1Q9UJ83 578 aa16.93■□□□□ 0.3
C9orf3-210ENST00000462125 NEURL1BA8MQ27 555 aa16.92■□□□□ 0.3
C9orf3-210ENST00000462125 H7C1W4 665 aa16.92■□□□□ 0.3
C9orf3-210ENST00000462125 POTEIP0CG38 1075 aa16.92■□□□□ 0.3
C9orf3-210ENST00000462125 POTEJP0CG39 1038 aa16.92■□□□□ 0.3
C9orf3-210ENST00000462125 JARID2Q92833 1246 aaPredicted RBP16.92■□□□□ 0.3
C9orf3-210ENST00000462125 ZNRF3Q9ULT6 936 aa16.92■□□□□ 0.3
C9orf3-210ENST00000462125 EPHX2P34913 555 aa16.91■□□□□ 0.3
C9orf3-210ENST00000462125 CWF19L2Q2TBE0 894 aaKnown RBP16.91■□□□□ 0.3
C9orf3-210ENST00000462125 CCDC152Q4G0S7 254 aa16.91■□□□□ 0.3
C9orf3-210ENST00000462125 LDHDQ86WU2 507 aa16.91■□□□□ 0.3
C9orf3-210ENST00000462125 SEC31BQ9NQW1 1179 aa16.91■□□□□ 0.3
C9orf3-210ENST00000462125 NSFL1CQ9UNZ2 370 aaKnown RBP16.91■□□□□ 0.3
C9orf3-210ENST00000462125 SCN4AP35499 1836 aa16.91■□□□□ 0.3
C9orf3-210ENST00000462125 CXCL9Q07325 125 aa16.9■□□□□ 0.3
C9orf3-210ENST00000462125 FKBP5Q13451 457 aaPredicted RBP16.9■□□□□ 0.3
C9orf3-210ENST00000462125 PNMA8AQ86V59 439 aaPredicted RBP16.9■□□□□ 0.3
C9orf3-210ENST00000462125 DNAAF4Q8WXU2 420 aa16.9■□□□□ 0.3
C9orf3-210ENST00000462125 GJA3Q9Y6H8 435 aa16.9■□□□□ 0.3
C9orf3-210ENST00000462125 TAF1P21675 1872 aa16.9■□□□□ 0.3
C9orf3-210ENST00000462125 SCNN1DP51172 638 aa16.89■□□□□ 0.29
C9orf3-210ENST00000462125 GPSM2P81274 684 aa16.89■□□□□ 0.29
C9orf3-210ENST00000462125 GCKRQ14397 625 aa16.89■□□□□ 0.29
C9orf3-210ENST00000462125 LINS1Q8NG48 757 aa16.89■□□□□ 0.29
C9orf3-210ENST00000462125 TTLL11Q8NHH1 800 aa16.89■□□□□ 0.29
C9orf3-210ENST00000462125 PODXL2Q9NZ53 605 aa16.89■□□□□ 0.29
C9orf3-210ENST00000462125 POLLQ9UGP5 575 aa16.89■□□□□ 0.29
C9orf3-210ENST00000462125 CCER2I3L3R5 266 aa16.88■□□□□ 0.29
C9orf3-210ENST00000462125 CTSWP56202 376 aa16.88■□□□□ 0.29
C9orf3-210ENST00000462125 WASHC4Q2M389 1173 aa16.88■□□□□ 0.29
C9orf3-210ENST00000462125 ITGBL1O95965 494 aaPredicted RBP16.87■□□□□ 0.29
C9orf3-210ENST00000462125 CASP7P55210 303 aa16.87■□□□□ 0.29
C9orf3-210ENST00000462125 TBC1D16Q8TBP0 767 aa16.87■□□□□ 0.29
C9orf3-210ENST00000462125 PLA2G12BQ9BX93 195 aa16.87■□□□□ 0.29
C9orf3-210ENST00000462125 CACNA1FO60840 1977 aa16.87■□□□□ 0.29
C9orf3-210ENST00000462125 COL4A1P02462 1669 aa16.87■□□□□ 0.29
C9orf3-210ENST00000462125 LRRC37AA6NMS7 1700 aa16.87■□□□□ 0.29
C9orf3-210ENST00000462125 PCNTO95613 3336 aa16.86■□□□□ 0.29
C9orf3-210ENST00000462125 DUOX1Q9NRD9 1551 aa16.86■□□□□ 0.29
C9orf3-210ENST00000462125 YDJCA8MPS7 323 aa16.86■□□□□ 0.29
C9orf3-210ENST00000462125 EPS15P42566 896 aa16.86■□□□□ 0.29
C9orf3-210ENST00000462125 TNIP1Q15025 636 aa16.86■□□□□ 0.29
C9orf3-210ENST00000462125 EAPPQ56P03 285 aaPredicted RBP16.86■□□□□ 0.29
C9orf3-210ENST00000462125 CIAPIN1Q6FI81 312 aa16.86■□□□□ 0.29
C9orf3-210ENST00000462125 KLRG1Q96E93 195 aa16.86■□□□□ 0.29
C9orf3-210ENST00000462125 PASKQ96RG2 1323 aa16.86■□□□□ 0.29
C9orf3-210ENST00000462125 C6orf229H3BNL8 230 aa16.85■□□□□ 0.29
C9orf3-210ENST00000462125 CSF1RP07333 972 aa16.85■□□□□ 0.29
C9orf3-210ENST00000462125 LMOD1P29536 600 aaPredicted RBP16.85■□□□□ 0.29
C9orf3-210ENST00000462125 BEND3Q5T5X7 828 aa16.85■□□□□ 0.29
C9orf3-210ENST00000462125 USP50Q70EL3 339 aaPredicted RBP16.85■□□□□ 0.29
C9orf3-210ENST00000462125 UBE3BQ7Z3V4 1068 aa16.85■□□□□ 0.29
C9orf3-210ENST00000462125 ANKRD18AQ8IVF6 992 aa16.85■□□□□ 0.29
C9orf3-210ENST00000462125 JMYQ8N9B5 988 aa16.85■□□□□ 0.29
C9orf3-210ENST00000462125 CCDC85AQ96PX6 553 aaPredicted RBP16.85■□□□□ 0.29
C9orf3-210ENST00000462125 CDC5LQ99459 802 aaKnown RBP16.85■□□□□ 0.29
C9orf3-210ENST00000462125 EYA3Q99504 573 aa16.85■□□□□ 0.29
C9orf3-210ENST00000462125 GPRC5DQ9NZD1 345 aa16.85■□□□□ 0.29
C9orf3-210ENST00000462125 RTL9Q8NET4 1388 aa16.85■□□□□ 0.29
C9orf3-210ENST00000462125 E9PSI1 815 aa16.84■□□□□ 0.29
C9orf3-210ENST00000462125 SLFN5Q08AF3 891 aa16.84■□□□□ 0.29
C9orf3-210ENST00000462125 GREM2Q9H772 168 aa16.84■□□□□ 0.29
C9orf3-210ENST00000462125 BSDC1Q9NW68 430 aaPredicted RBP16.84■□□□□ 0.29
C9orf3-210ENST00000462125 CLEC11AQ9Y240 323 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms