RNA–Protein interactions for RNA: ENST00000461707.5

NPHP1-209, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 3,822 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-209ENST00000461707 NCLP19338 710 aaKnown RBP8.89□□□□□ -0.99
NPHP1-209ENST00000461707 OS9Q13438 667 aaPredicted RBP8.89□□□□□ -0.99
NPHP1-209ENST00000461707 PDLIM2Q96JY6 352 aa8.89□□□□□ -0.99
NPHP1-209ENST00000461707 MYD88Q99836 296 aa8.89□□□□□ -0.99
NPHP1-209ENST00000461707 CCDC9Q9Y3X0 531 aaKnown RBP8.89□□□□□ -0.99
NPHP1-209ENST00000461707 DDX49Q9Y6V7 483 aaKnown RBP8.89□□□□□ -0.99
NPHP1-209ENST00000461707 GRM8O00222 908 aa8.88□□□□□ -0.99
NPHP1-209ENST00000461707 CSB-PGBD3P0DP91 1061 aa8.88□□□□□ -0.99
NPHP1-209ENST00000461707 EVCP57679 992 aa8.88□□□□□ -0.99
NPHP1-209ENST00000461707 C10orf71Q711Q0 1435 aa8.88□□□□□ -0.99
NPHP1-209ENST00000461707 FOXO4P98177 505 aa8.88□□□□□ -0.99
NPHP1-209ENST00000461707 AACSQ86V21 672 aa8.88□□□□□ -0.99
NPHP1-209ENST00000461707 TCEANC2Q96MN5 208 aa8.88□□□□□ -0.99
NPHP1-209ENST00000461707 DDX21Q9NR30 783 aaKnown RBP eCLIP8.88□□□□□ -0.99
NPHP1-209ENST00000461707 RAPGEF4Q8WZA2 1011 aa8.88□□□□□ -0.99
NPHP1-209ENST00000461707 INTS4Q96HW7 963 aaKnown RBP8.88□□□□□ -0.99
NPHP1-209ENST00000461707 FUCA2Q9BTY2 467 aa8.88□□□□□ -0.99
NPHP1-209ENST00000461707 RAD50Q92878 1312 aa8.88□□□□□ -0.99
NPHP1-209ENST00000461707 NEURL1BA8MQ27 555 aa8.87□□□□□ -0.99
NPHP1-209ENST00000461707 RAB11FIP3O75154 756 aa8.87□□□□□ -0.99
NPHP1-209ENST00000461707 RUFY3Q7L099 469 aa8.87□□□□□ -0.99
NPHP1-209ENST00000461707 BOLA2Q9H3K6 86 aa8.87□□□□□ -0.99
NPHP1-209ENST00000461707 GADD45BO75293 160 aaPredicted RBP8.87□□□□□ -0.99
NPHP1-209ENST00000461707 ATF3P18847 181 aa8.87□□□□□ -0.99
NPHP1-209ENST00000461707 RIC3Q7Z5B4 369 aa8.87□□□□□ -0.99
NPHP1-209ENST00000461707 TMEM63CQ9P1W3 806 aa8.87□□□□□ -0.99
NPHP1-209ENST00000461707 NBPF26B4DH59 902 aa8.87□□□□□ -0.99
NPHP1-209ENST00000461707 AK2P54819 239 aa8.87□□□□□ -0.99
NPHP1-209ENST00000461707 NECTIN1Q15223 517 aa8.87□□□□□ -0.99
NPHP1-209ENST00000461707 NBPF14Q5TI25 921 aa8.87□□□□□ -0.99
NPHP1-209ENST00000461707 NBPF10Q6P3W6 841 aaKnown RBP8.87□□□□□ -0.99
NPHP1-209ENST00000461707 NBPF15Q8N660 670 aa8.87□□□□□ -0.99
NPHP1-209ENST00000461707 ZNF445P59923 1031 aa8.86□□□□□ -0.99
NPHP1-209ENST00000461707 LINS1Q8NG48 757 aa8.86□□□□□ -0.99
NPHP1-209ENST00000461707 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.86□□□□□ -0.99
NPHP1-209ENST00000461707 ISY1Q9ULR0 285 aaKnown RBP8.86□□□□□ -0.99
NPHP1-209ENST00000461707 FER1L6Q2WGJ9 1857 aa8.86□□□□□ -0.99
NPHP1-209ENST00000461707 SNED1Q8TER0 1413 aa8.86□□□□□ -0.99
NPHP1-209ENST00000461707 GCKRQ14397 625 aa8.86□□□□□ -0.99
NPHP1-209ENST00000461707 L1TD1Q5T7N2 865 aaKnown RBP8.86□□□□□ -0.99
NPHP1-209ENST00000461707 VGLL2Q8N8G2 317 aa8.86□□□□□ -0.99
NPHP1-209ENST00000461707 A0A0D9SFI3 127 aa8.86□□□□□ -0.99
NPHP1-209ENST00000461707 PRIM1P49642 420 aaKnown RBP8.86□□□□□ -0.99
NPHP1-209ENST00000461707 ZSCAN23Q3MJ62 389 aa8.86□□□□□ -0.99
NPHP1-209ENST00000461707 PRPF40BQ6NWY9 871 aaKnown RBP8.86□□□□□ -0.99
NPHP1-209ENST00000461707 ZNF589Q86UQ0 364 aaPredicted RBP8.86□□□□□ -0.99
NPHP1-209ENST00000461707 RBSNQ9H1K0 784 aa8.86□□□□□ -0.99
NPHP1-209ENST00000461707 HYPKQ9NX55 129 aa8.86□□□□□ -0.99
NPHP1-209ENST00000461707 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.86□□□□□ -0.99
NPHP1-209ENST00000461707 TRIM28Q13263 835 aaKnown RBP8.85□□□□□ -0.99
NPHP1-209ENST00000461707 KLHL40Q2TBA0 621 aa8.85□□□□□ -0.99
NPHP1-209ENST00000461707 RBM43Q6ZSC3 357 aaKnown RBP8.85□□□□□ -0.99
NPHP1-209ENST00000461707 TTLL7Q6ZT98 887 aa8.85□□□□□ -0.99
NPHP1-209ENST00000461707 PPP1R9BQ96SB3 815 aa8.85□□□□□ -0.99
NPHP1-209ENST00000461707 H7C1W4 665 aa8.85□□□□□ -0.99
NPHP1-209ENST00000461707 BRD1O95696 1058 aa8.85□□□□□ -0.99
NPHP1-209ENST00000461707 TATP17735 454 aaPredicted RBP8.85□□□□□ -0.99
NPHP1-209ENST00000461707 MRE11P49959 708 aa8.85□□□□□ -0.99
NPHP1-209ENST00000461707 UBE3BQ7Z3V4 1068 aa8.85□□□□□ -0.99
NPHP1-209ENST00000461707 COPRSQ9NQ92 184 aa8.85□□□□□ -0.99
NPHP1-209ENST00000461707 ATG3Q9NT62 314 aa8.85□□□□□ -0.99
NPHP1-209ENST00000461707 ECHDC1Q9NTX5 307 aa8.85□□□□□ -0.99
NPHP1-209ENST00000461707 A0A0G2JLW4 131 aa8.85□□□□□ -0.99
NPHP1-209ENST00000461707 A1BGP04217 495 aa8.85□□□□□ -0.99
NPHP1-209ENST00000461707 NMIQ13287 307 aaPredicted RBP8.85□□□□□ -0.99
NPHP1-209ENST00000461707 CLASRPQ8N2M8 674 aaKnown RBP8.85□□□□□ -0.99
NPHP1-209ENST00000461707 ZNF512BQ96KM6 892 aaPredicted RBP8.85□□□□□ -0.99
NPHP1-209ENST00000461707 SEC62Q99442 399 aaKnown RBP8.85□□□□□ -0.99
NPHP1-209ENST00000461707 TM6SF1Q9BZW5 370 aa8.85□□□□□ -0.99
NPHP1-209ENST00000461707 EP400Q96L91 3159 aa8.84□□□□□ -0.99
NPHP1-209ENST00000461707 NUCB2P80303 420 aa8.84□□□□□ -0.99
NPHP1-209ENST00000461707 NECAB1Q8N987 351 aa8.84□□□□□ -0.99
NPHP1-209ENST00000461707 SH3TC1Q8TE82 1336 aa8.84□□□□□ -0.99
NPHP1-209ENST00000461707 GOLGB1Q14789 3259 aaKnown RBP8.84□□□□□ -0.99
NPHP1-209ENST00000461707 CASTP20810 708 aaKnown RBP8.84□□□□□ -0.99
NPHP1-209ENST00000461707 ANKRD13DQ6ZTN6 518 aa8.84□□□□□ -0.99
NPHP1-209ENST00000461707 ATG9AQ7Z3C6 839 aa8.84□□□□□ -0.99
NPHP1-209ENST00000461707 CNTROBQ8N137 903 aa8.84□□□□□ -0.99
NPHP1-209ENST00000461707 FAM43AQ8N2R8 423 aa8.84□□□□□ -0.99
NPHP1-209ENST00000461707 GPR108Q9NPR9 543 aa8.84□□□□□ -0.99
NPHP1-209ENST00000461707 COL1A1P02452 1464 aaPredicted RBP8.84□□□□□ -0.99
NPHP1-209ENST00000461707 CCDC171Q6TFL3 1326 aa8.84□□□□□ -0.99
NPHP1-209ENST00000461707 IFIT2P09913 472 aaKnown RBP8.84□□□□□ -0.99
NPHP1-209ENST00000461707 TFCP2Q12800 502 aa8.84□□□□□ -0.99
NPHP1-209ENST00000461707 CCDC129Q6ZRS4 1044 aa8.84□□□□□ -0.99
NPHP1-209ENST00000461707 IFNL2Q8IZJ0 200 aa8.84□□□□□ -0.99
NPHP1-209ENST00000461707 METTL22Q9BUU2 404 aaPredicted RBP8.84□□□□□ -0.99
NPHP1-209ENST00000461707 DBNLQ9UJU6 430 aaKnown RBP8.84□□□□□ -0.99
NPHP1-209ENST00000461707 ADAMTSL1Q8N6G6 1762 aa8.84□□□□□ -1
NPHP1-209ENST00000461707 PTPN12Q05209 780 aaKnown RBP8.83□□□□□ -1
NPHP1-209ENST00000461707 SYCE3A1L190 88 aa8.83□□□□□ -1
NPHP1-209ENST00000461707 GLRX3O76003 335 aaKnown RBP8.83□□□□□ -1
NPHP1-209ENST00000461707 VSIG10Q8N0Z9 540 aa8.83□□□□□ -1
NPHP1-209ENST00000461707 CWC22Q9HCG8 908 aaKnown RBP8.83□□□□□ -1
NPHP1-209ENST00000461707 CSF1RP07333 972 aa8.83□□□□□ -1
NPHP1-209ENST00000461707 ZNF594Q96JF6 807 aaPredicted RBP8.83□□□□□ -1
NPHP1-209ENST00000461707 ISCA1Q9BUE6 129 aa8.83□□□□□ -1
NPHP1-209ENST00000461707 ZMYM6O95789 1325 aa8.82□□□□□ -1
NPHP1-209ENST00000461707 SYNE4Q8N205 404 aa8.82□□□□□ -1
NPHP1-209ENST00000461707 JAKMIP1Q96N16 626 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms