RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 SUSD4Q5VX71 490 aa18.98■□□□□ 0.63
TMEM39A-203ENST00000461654 UBN2Q6ZU65 1347 aa18.98■□□□□ 0.63
TMEM39A-203ENST00000461654 NUP98P52948 1817 aa18.97■□□□□ 0.63
TMEM39A-203ENST00000461654 FAM177BA6PVY3 158 aa18.97■□□□□ 0.63
TMEM39A-203ENST00000461654 TOMM70O94826 608 aa18.97■□□□□ 0.63
TMEM39A-203ENST00000461654 ALDH1B1P30837 517 aa18.97■□□□□ 0.63
TMEM39A-203ENST00000461654 HSP90AB3PQ58FF7 597 aa18.97■□□□□ 0.63
TMEM39A-203ENST00000461654 USP44Q9H0E7 712 aa18.97■□□□□ 0.63
TMEM39A-203ENST00000461654 C1orf115Q9H7X2 142 aa18.97■□□□□ 0.63
TMEM39A-203ENST00000461654 RIC1Q4ADV7 1423 aa18.97■□□□□ 0.63
TMEM39A-203ENST00000461654 NEURL1BA8MQ27 555 aa18.96■□□□□ 0.63
TMEM39A-203ENST00000461654 GPTP24298 496 aa18.96■□□□□ 0.63
TMEM39A-203ENST00000461654 CWF19L2Q2TBE0 894 aaKnown RBP18.96■□□□□ 0.63
TMEM39A-203ENST00000461654 RPAP2Q8IXW5 612 aaPredicted RBP18.96■□□□□ 0.63
TMEM39A-203ENST00000461654 NMRK2Q9NPI5 230 aa18.96■□□□□ 0.63
TMEM39A-203ENST00000461654 HDAC1Q13547 482 aaPredicted RBP18.95■□□□□ 0.62
TMEM39A-203ENST00000461654 ERFEQ4G0M1 354 aa18.95■□□□□ 0.62
TMEM39A-203ENST00000461654 PPP1R42Q7Z4L9 355 aa18.95■□□□□ 0.62
TMEM39A-203ENST00000461654 NUTM1Q86Y26 1132 aa18.95■□□□□ 0.62
TMEM39A-203ENST00000461654 TAOK3Q9H2K8 898 aa18.95■□□□□ 0.62
TMEM39A-203ENST00000461654 SLX4Q8IY92 1834 aa18.95■□□□□ 0.62
TMEM39A-203ENST00000461654 ARFGEF2Q9Y6D5 1785 aa18.94■□□□□ 0.62
TMEM39A-203ENST00000461654 GLTPD2A6NH11 291 aa18.94■□□□□ 0.62
TMEM39A-203ENST00000461654 GRM8O00222 908 aa18.94■□□□□ 0.62
TMEM39A-203ENST00000461654 HMMRO75330 724 aa18.94■□□□□ 0.62
TMEM39A-203ENST00000461654 NTSR2O95665 410 aa18.94■□□□□ 0.62
TMEM39A-203ENST00000461654 IGKV5-2P06315 115 aa18.94■□□□□ 0.62
TMEM39A-203ENST00000461654 HOXA10P31260 410 aaPredicted RBP18.94■□□□□ 0.62
TMEM39A-203ENST00000461654 TCIRG1Q13488 830 aa18.94■□□□□ 0.62
TMEM39A-203ENST00000461654 GCKRQ14397 625 aa18.94■□□□□ 0.62
TMEM39A-203ENST00000461654 SLC10A5Q5PT55 438 aa18.94■□□□□ 0.62
TMEM39A-203ENST00000461654 FER1L6Q2WGJ9 1857 aa18.94■□□□□ 0.62
TMEM39A-203ENST00000461654 ABCC12Q96J65 1359 aa18.93■□□□□ 0.62
TMEM39A-203ENST00000461654 ATP5J2-PTCD1G3V325 749 aa18.93■□□□□ 0.62
TMEM39A-203ENST00000461654 CWC25Q9NXE8 425 aaPredicted RBP18.93■□□□□ 0.62
TMEM39A-203ENST00000461654 ZNF219Q9P2Y4 722 aaPredicted RBP18.93■□□□□ 0.62
TMEM39A-203ENST00000461654 IGHDP01880 384 aa18.92■□□□□ 0.62
TMEM39A-203ENST00000461654 CCDC93Q567U6 631 aa18.92■□□□□ 0.62
TMEM39A-203ENST00000461654 ANKRD44Q8N8A2 993 aa18.92■□□□□ 0.62
TMEM39A-203ENST00000461654 CCDC191Q8NCU4 936 aa18.92■□□□□ 0.62
TMEM39A-203ENST00000461654 UTP14AQ9BVJ6 771 aaKnown RBP18.92■□□□□ 0.62
TMEM39A-203ENST00000461654 LRRFIP2Q9Y608 721 aaKnown RBP18.92■□□□□ 0.62
TMEM39A-203ENST00000461654 NBPF7P0C2Y1 421 aaPredicted RBP18.91■□□□□ 0.62
TMEM39A-203ENST00000461654 HSPA6P17066 643 aa18.91■□□□□ 0.62
TMEM39A-203ENST00000461654 CEP85Q6P2H3 762 aa18.91■□□□□ 0.62
TMEM39A-203ENST00000461654 RTKN2Q8IZC4 609 aa18.91■□□□□ 0.62
TMEM39A-203ENST00000461654 RRAGCQ9HB90 399 aa18.91■□□□□ 0.62
TMEM39A-203ENST00000461654 TRIM28Q13263 835 aaKnown RBP18.9■□□□□ 0.62
TMEM39A-203ENST00000461654 CC2D2BQ6DHV5 1058 aa18.9■□□□□ 0.62
TMEM39A-203ENST00000461654 DPY19L2Q6NUT2 758 aa18.9■□□□□ 0.62
TMEM39A-203ENST00000461654 NLRP10Q86W26 655 aa18.9■□□□□ 0.62
TMEM39A-203ENST00000461654 RBM46Q8TBY0 533 aaKnown RBP18.9■□□□□ 0.62
TMEM39A-203ENST00000461654 CRAMP1Q96RY5 1269 aa18.9■□□□□ 0.62
TMEM39A-203ENST00000461654 UTYO14607 1347 aa18.9■□□□□ 0.62
TMEM39A-203ENST00000461654 FKBP4Q02790 459 aaKnown RBP eCLIP18.89■□□□□ 0.61
TMEM39A-203ENST00000461654 NLRP3Q96P20 1036 aa18.89■□□□□ 0.61
TMEM39A-203ENST00000461654 ISCA1Q9BUE6 129 aa18.89■□□□□ 0.61
TMEM39A-203ENST00000461654 TNRC6CQ9HCJ0 1690 aaKnown RBP18.89■□□□□ 0.61
TMEM39A-203ENST00000461654 GRIPAP1Q4V328 841 aa18.88■□□□□ 0.61
TMEM39A-203ENST00000461654 RPGRQ92834 1020 aaKnown RBP18.88■□□□□ 0.61
TMEM39A-203ENST00000461654 GCC1Q96CN9 775 aa18.88■□□□□ 0.61
TMEM39A-203ENST00000461654 VEGFAP15692 232 aaPredicted RBP18.87■□□□□ 0.61
TMEM39A-203ENST00000461654 ATP8B2P98198 1209 aa18.87■□□□□ 0.61
TMEM39A-203ENST00000461654 FSTL1Q12841 308 aa18.87■□□□□ 0.61
TMEM39A-203ENST00000461654 C16orf71Q8IYS4 520 aaPredicted RBP18.87■□□□□ 0.61
TMEM39A-203ENST00000461654 RBM17Q96I25 401 aaKnown RBP18.87■□□□□ 0.61
TMEM39A-203ENST00000461654 DICER1Q9UPY3 1922 aaKnown RBP18.86■□□□□ 0.61
TMEM39A-203ENST00000461654 CCDC88AQ3V6T2 1871 aa18.86■□□□□ 0.61
TMEM39A-203ENST00000461654 SNED1Q8TER0 1413 aa18.86■□□□□ 0.61
TMEM39A-203ENST00000461654 UBE3BQ7Z3V4 1068 aa18.86■□□□□ 0.61
TMEM39A-203ENST00000461654 PSMD1Q99460 953 aa18.86■□□□□ 0.61
TMEM39A-203ENST00000461654 ZBTB47Q9UFB7 747 aaPredicted RBP18.86■□□□□ 0.61
TMEM39A-203ENST00000461654 H7C1W4 665 aa18.85■□□□□ 0.61
TMEM39A-203ENST00000461654 C3orf67Q6ZVT6 689 aa18.85■□□□□ 0.61
TMEM39A-203ENST00000461654 SIRT2Q8IXJ6 389 aa18.85■□□□□ 0.61
TMEM39A-203ENST00000461654 CACNA1SQ13698 1873 aa18.85■□□□□ 0.61
TMEM39A-203ENST00000461654 TIAM2Q8IVF5 1701 aa18.85■□□□□ 0.61
TMEM39A-203ENST00000461654 ANKRD36CQ5JPF3 1778 aa18.84■□□□□ 0.61
TMEM39A-203ENST00000461654 SH3TC1Q8TE82 1336 aa18.84■□□□□ 0.61
TMEM39A-203ENST00000461654 POTECB2RU33 542 aa18.84■□□□□ 0.61
TMEM39A-203ENST00000461654 OLFM4Q6UX06 510 aa18.84■□□□□ 0.61
TMEM39A-203ENST00000461654 SMC5Q8IY18 1101 aa18.84■□□□□ 0.61
TMEM39A-203ENST00000461654 SYNE4Q8N205 404 aa18.84■□□□□ 0.61
TMEM39A-203ENST00000461654 SUCLG2Q96I99 432 aa18.84■□□□□ 0.61
TMEM39A-203ENST00000461654 TRMT112Q9UI30 125 aaKnown RBP18.84■□□□□ 0.61
TMEM39A-203ENST00000461654 SRGAP3O43295 1099 aa18.83■□□□□ 0.6
TMEM39A-203ENST00000461654 PCCAP05165 728 aaPredicted RBP18.83■□□□□ 0.6
TMEM39A-203ENST00000461654 ZNF277Q9NRM2 450 aaPredicted RBP18.83■□□□□ 0.6
TMEM39A-203ENST00000461654 BBOX1O75936 387 aa18.82■□□□□ 0.6
TMEM39A-203ENST00000461654 HSP90B1P14625 803 aaKnown RBP18.82■□□□□ 0.6
TMEM39A-203ENST00000461654 APLP1P51693 650 aa18.82■□□□□ 0.6
TMEM39A-203ENST00000461654 MTX1Q13505 466 aa18.82■□□□□ 0.6
TMEM39A-203ENST00000461654 ZBTB38Q8NAP3 1195 aaPredicted RBP18.82■□□□□ 0.6
TMEM39A-203ENST00000461654 DCTPP1Q9H773 170 aa18.82■□□□□ 0.6
TMEM39A-203ENST00000461654 WDR90Q96KV7 1748 aa18.82■□□□□ 0.6
TMEM39A-203ENST00000461654 PPEF1O14829 653 aaPredicted RBP18.81■□□□□ 0.6
TMEM39A-203ENST00000461654 IARSP41252 1262 aaKnown RBP18.81■□□□□ 0.6
TMEM39A-203ENST00000461654 SMC1BQ8NDV3 1235 aa18.81■□□□□ 0.6
TMEM39A-203ENST00000461654 SSH3Q8TE77 659 aa18.81■□□□□ 0.6
TMEM39A-203ENST00000461654 BICC1Q9H694 974 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms