RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 USP17L13C9JLJ4 530 aa9.48□□□□□ -0.89
CFHR3-204ENST00000461558 USP17L12C9JPN9 530 aa9.48□□□□□ -0.89
CFHR3-204ENST00000461558 USP17L11C9JVI0 530 aa9.48□□□□□ -0.89
CFHR3-204ENST00000461558 USP17L21D6R901 530 aa9.48□□□□□ -0.89
CFHR3-204ENST00000461558 USP17L18D6R9N7 530 aa9.48□□□□□ -0.89
CFHR3-204ENST00000461558 USP17L22D6RA61 530 aa9.48□□□□□ -0.89
CFHR3-204ENST00000461558 USP17L17D6RBQ6 530 aa9.48□□□□□ -0.89
CFHR3-204ENST00000461558 USP17L19D6RCP7 530 aa9.48□□□□□ -0.89
CFHR3-204ENST00000461558 USP17L20D6RJB6 530 aa9.48□□□□□ -0.89
CFHR3-204ENST00000461558 CPB1P15086 417 aa9.48□□□□□ -0.89
CFHR3-204ENST00000461558 USP17L24Q0WX57 530 aa9.48□□□□□ -0.89
CFHR3-204ENST00000461558 PCSK7Q16549 785 aa9.48□□□□□ -0.89
CFHR3-204ENST00000461558 RNF112Q9ULX5 631 aa9.48□□□□□ -0.89
CFHR3-204ENST00000461558 MSL1Q68DK7 614 aa9.47□□□□□ -0.89
CFHR3-204ENST00000461558 LPIN3Q9BQK8 851 aa9.47□□□□□ -0.89
CFHR3-204ENST00000461558 FRRS1LQ9P0K9 344 aa9.47□□□□□ -0.89
CFHR3-204ENST00000461558 ZFATQ9P243 1243 aa9.47□□□□□ -0.89
CFHR3-204ENST00000461558 ARSDP51689 593 aa9.46□□□□□ -0.9
CFHR3-204ENST00000461558 DGKZQ13574 1117 aa9.46□□□□□ -0.9
CFHR3-204ENST00000461558 GRIK5Q16478 980 aa9.46□□□□□ -0.9
CFHR3-204ENST00000461558 PERM1Q5SV97 790 aa9.46□□□□□ -0.9
CFHR3-204ENST00000461558 DHX32Q7L7V1 743 aaKnown RBP9.46□□□□□ -0.9
CFHR3-204ENST00000461558 KRT25Q7Z3Z0 450 aa9.46□□□□□ -0.9
CFHR3-204ENST00000461558 DTWD1Q8N5C7 304 aa9.46□□□□□ -0.9
CFHR3-204ENST00000461558 CALR3Q96L12 384 aaKnown RBP9.46□□□□□ -0.9
CFHR3-204ENST00000461558 QTRT2Q9H974 415 aaKnown RBP9.46□□□□□ -0.9
CFHR3-204ENST00000461558 TRPM4Q8TD43 1214 aa9.45□□□□□ -0.9
CFHR3-204ENST00000461558 C11orf16Q9NQ32 467 aa9.45□□□□□ -0.9
CFHR3-204ENST00000461558 ZBTB42B2RXF5 422 aa9.44□□□□□ -0.9
CFHR3-204ENST00000461558 GPLD1P80108 840 aa9.44□□□□□ -0.9
CFHR3-204ENST00000461558 MCTP1Q6DN14 999 aa9.44□□□□□ -0.9
CFHR3-204ENST00000461558 FBXO11Q86XK2 927 aa9.44□□□□□ -0.9
CFHR3-204ENST00000461558 WFDC12Q8WWY7 111 aa9.44□□□□□ -0.9
CFHR3-204ENST00000461558 IFT43Q96FT9 208 aa9.44□□□□□ -0.9
CFHR3-204ENST00000461558 ARXQ96QS3 562 aa9.44□□□□□ -0.9
CFHR3-204ENST00000461558 VRTNQ9H8Y1 702 aa9.44□□□□□ -0.9
CFHR3-204ENST00000461558 FOXO3O43524 673 aa9.43□□□□□ -0.9
CFHR3-204ENST00000461558 MICAL2O94851 1124 aa9.43□□□□□ -0.9
CFHR3-204ENST00000461558 RARAP10276 462 aa9.43□□□□□ -0.9
CFHR3-204ENST00000461558 TARSP26639 723 aaKnown RBP9.43□□□□□ -0.9
CFHR3-204ENST00000461558 WEE1P30291 646 aa9.43□□□□□ -0.9
CFHR3-204ENST00000461558 MLLT1Q03111 559 aaPredicted RBP9.43□□□□□ -0.9
CFHR3-204ENST00000461558 PLAURQ03405 335 aa9.43□□□□□ -0.9
CFHR3-204ENST00000461558 ELMSAN1Q6PJG2 1045 aa9.43□□□□□ -0.9
CFHR3-204ENST00000461558 WFDC8Q8IUA0 241 aa9.43□□□□□ -0.9
CFHR3-204ENST00000461558 SASH3O75995 380 aa9.42□□□□□ -0.9
CFHR3-204ENST00000461558 LMOD1P29536 600 aaPredicted RBP9.42□□□□□ -0.9
CFHR3-204ENST00000461558 IREB2P48200 963 aaKnown RBP9.42□□□□□ -0.9
CFHR3-204ENST00000461558 TTC9Q92623 222 aa9.42□□□□□ -0.9
CFHR3-204ENST00000461558 MYO19Q96H55 970 aa9.42□□□□□ -0.9
CFHR3-204ENST00000461558 NOS3P29474 1203 aa9.41□□□□□ -0.9
CFHR3-204ENST00000461558 C11orf91Q3C1V1 193 aa9.41□□□□□ -0.9
CFHR3-204ENST00000461558 VTI1AQ96AJ9 217 aa9.41□□□□□ -0.9
CFHR3-204ENST00000461558 ARID4AP29374 1257 aaPredicted RBP9.39□□□□□ -0.91
CFHR3-204ENST00000461558 NRLP54845 237 aa9.39□□□□□ -0.91
CFHR3-204ENST00000461558 PRR23CQ6ZRP0 262 aa9.39□□□□□ -0.91
CFHR3-204ENST00000461558 SMG9Q9H0W8 520 aaKnown RBP9.39□□□□□ -0.91
CFHR3-204ENST00000461558 PCMTD2Q9NV79 361 aa9.39□□□□□ -0.91
CFHR3-204ENST00000461558 RTCBQ9Y3I0 505 aaKnown RBP9.39□□□□□ -0.91
CFHR3-204ENST00000461558 A6NJR5 290 aa9.38□□□□□ -0.91
CFHR3-204ENST00000461558 OPLAHO14841 1288 aa9.38□□□□□ -0.91
CFHR3-204ENST00000461558 IGF2-ASQ6U949 168 aa9.38□□□□□ -0.91
CFHR3-204ENST00000461558 MEGF10Q96KG7 1140 aa9.38□□□□□ -0.91
CFHR3-204ENST00000461558 USP20Q9Y2K6 914 aa9.38□□□□□ -0.91
CFHR3-204ENST00000461558 DEAF1O75398 565 aaPredicted RBP9.37□□□□□ -0.91
CFHR3-204ENST00000461558 EGFRP00533 1210 aa9.37□□□□□ -0.91
CFHR3-204ENST00000461558 EIF2AK2P19525 551 aaKnown RBP9.37□□□□□ -0.91
CFHR3-204ENST00000461558 HFE2Q6ZVN8 426 aa9.37□□□□□ -0.91
CFHR3-204ENST00000461558 TLR7Q9NYK1 1049 aaKnown RBP9.37□□□□□ -0.91
CFHR3-204ENST00000461558 LRFN2Q9ULH4 789 aa9.37□□□□□ -0.91
CFHR3-204ENST00000461558 PAX4O43316 350 aa9.36□□□□□ -0.91
CFHR3-204ENST00000461558 XYLBO75191 536 aa9.35□□□□□ -0.91
CFHR3-204ENST00000461558 TREML1Q86YW5 311 aa9.35□□□□□ -0.91
CFHR3-204ENST00000461558 RGL4Q8IZJ4 473 aa9.35□□□□□ -0.91
CFHR3-204ENST00000461558 FAM200AQ8TCP9 573 aa9.35□□□□□ -0.91
CFHR3-204ENST00000461558 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.35□□□□□ -0.91
CFHR3-204ENST00000461558 COL17A1Q9UMD9 1497 aaPredicted RBP9.34□□□□□ -0.91
CFHR3-204ENST00000461558 DLL1O00548 723 aa9.34□□□□□ -0.91
CFHR3-204ENST00000461558 CFAP70Q5T0N1 1121 aa9.34□□□□□ -0.91
CFHR3-204ENST00000461558 SLC51AQ86UW1 340 aa9.34□□□□□ -0.91
CFHR3-204ENST00000461558 PLD4Q96BZ4 506 aa9.34□□□□□ -0.91
CFHR3-204ENST00000461558 CMTR1Q8N1G2 835 aaKnown RBP9.33□□□□□ -0.92
CFHR3-204ENST00000461558 LOC102724428A0A0B4J2F2 783 aa9.32□□□□□ -0.92
CFHR3-204ENST00000461558 J3QW42 95 aa9.32□□□□□ -0.92
CFHR3-204ENST00000461558 PSAPP07602 524 aa9.32□□□□□ -0.92
CFHR3-204ENST00000461558 FSTP19883 344 aa9.32□□□□□ -0.92
CFHR3-204ENST00000461558 SIK1P57059 783 aa9.32□□□□□ -0.92
CFHR3-204ENST00000461558 FKBP5Q13451 457 aaPredicted RBP9.32□□□□□ -0.92
CFHR3-204ENST00000461558 TMEM132AQ24JP5 1023 aa9.32□□□□□ -0.92
CFHR3-204ENST00000461558 KCNMB2Q9Y691 235 aa9.32□□□□□ -0.92
CFHR3-204ENST00000461558 MMP20O60882 483 aa9.31□□□□□ -0.92
CFHR3-204ENST00000461558 HOXD8P13378 290 aaPredicted RBP9.31□□□□□ -0.92
CFHR3-204ENST00000461558 SSTR4P31391 388 aa9.31□□□□□ -0.92
CFHR3-204ENST00000461558 TXKP42681 527 aa9.31□□□□□ -0.92
CFHR3-204ENST00000461558 COX20Q5RI15 118 aa9.31□□□□□ -0.92
CFHR3-204ENST00000461558 DZIP1LQ8IYY4 767 aaKnown RBP9.31□□□□□ -0.92
CFHR3-204ENST00000461558 NSUN5Q96P11 429 aaKnown RBP9.31□□□□□ -0.92
CFHR3-204ENST00000461558 AKTIPQ9H8T0 292 aa9.31□□□□□ -0.92
CFHR3-204ENST00000461558 SOX18P35713 384 aa9.3□□□□□ -0.92
CFHR3-204ENST00000461558 GDF6Q6KF10 455 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms