RNA–Protein interactions for RNA: ENST00000461379.5

GAPVD1-210, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-210ENST00000461379 C7orf43Q8WVR3 580 aa20.22■□□□□ 0.83
GAPVD1-210ENST00000461379 COL11A2P13942 1736 aaPredicted RBP20.22■□□□□ 0.83
GAPVD1-210ENST00000461379 FOXO4P98177 505 aa20.21■□□□□ 0.83
GAPVD1-210ENST00000461379 GRAPQ13588 217 aa20.21■□□□□ 0.83
GAPVD1-210ENST00000461379 EPHA10Q5JZY3 1008 aa20.21■□□□□ 0.83
GAPVD1-210ENST00000461379 FTSJ3Q8IY81 847 aaKnown RBP20.21■□□□□ 0.83
GAPVD1-210ENST00000461379 DZIP1LQ8IYY4 767 aaKnown RBP20.21■□□□□ 0.83
GAPVD1-210ENST00000461379 GRAPLQ8TC17 118 aaPredicted RBP20.21■□□□□ 0.83
GAPVD1-210ENST00000461379 SUCLG2Q96I99 432 aa20.21■□□□□ 0.83
GAPVD1-210ENST00000461379 SEC31BQ9NQW1 1179 aa20.21■□□□□ 0.83
GAPVD1-210ENST00000461379 PPEF1O14829 653 aaPredicted RBP20.2■□□□□ 0.82
GAPVD1-210ENST00000461379 BBOX1O75936 387 aa20.2■□□□□ 0.82
GAPVD1-210ENST00000461379 CSF1RP07333 972 aa20.2■□□□□ 0.82
GAPVD1-210ENST00000461379 OLFM4Q6UX06 510 aa20.2■□□□□ 0.82
GAPVD1-210ENST00000461379 TMEM57Q8N5G2 664 aa20.2■□□□□ 0.82
GAPVD1-210ENST00000461379 CELF1Q92879 486 aaKnown RBP20.2■□□□□ 0.82
GAPVD1-210ENST00000461379 GREM2Q9H772 168 aa20.2■□□□□ 0.82
GAPVD1-210ENST00000461379 PLIN1O60240 522 aa20.19■□□□□ 0.82
GAPVD1-210ENST00000461379 RLBP1P12271 317 aa20.19■□□□□ 0.82
GAPVD1-210ENST00000461379 KAZALD1Q96I82 304 aa20.19■□□□□ 0.82
GAPVD1-210ENST00000461379 RPS8P62241 208 aaKnown RBP20.18■□□□□ 0.82
GAPVD1-210ENST00000461379 SOGA3Q5TF21 947 aa20.18■□□□□ 0.82
GAPVD1-210ENST00000461379 LMBR1LQ6UX01 489 aa20.18■□□□□ 0.82
GAPVD1-210ENST00000461379 SLC51AQ86UW1 340 aa20.18■□□□□ 0.82
GAPVD1-210ENST00000461379 MEIS3Q99687 375 aa20.18■□□□□ 0.82
GAPVD1-210ENST00000461379 DDX60Q8IY21 1712 aaKnown RBP20.17■□□□□ 0.82
GAPVD1-210ENST00000461379 UBTFL1P0CB47 393 aaPredicted RBP20.17■□□□□ 0.82
GAPVD1-210ENST00000461379 FAM161AQ3B820 660 aa20.17■□□□□ 0.82
GAPVD1-210ENST00000461379 CCDC93Q567U6 631 aa20.17■□□□□ 0.82
GAPVD1-210ENST00000461379 PANK1Q8TE04 598 aa20.17■□□□□ 0.82
GAPVD1-210ENST00000461379 ATP6V0A2Q9Y487 856 aa20.17■□□□□ 0.82
GAPVD1-210ENST00000461379 RTL9Q8NET4 1388 aa20.17■□□□□ 0.82
GAPVD1-210ENST00000461379 DLEC1Q9Y238 1755 aa20.16■□□□□ 0.82
GAPVD1-210ENST00000461379 MS4A1P11836 297 aa20.16■□□□□ 0.82
GAPVD1-210ENST00000461379 BICC1Q9H694 974 aaKnown RBP20.16■□□□□ 0.82
GAPVD1-210ENST00000461379 CHMP3Q9Y3E7 222 aa20.16■□□□□ 0.82
GAPVD1-210ENST00000461379 NFKBIEO00221 500 aa20.15■□□□□ 0.82
GAPVD1-210ENST00000461379 ITGA6P23229 1130 aa20.15■□□□□ 0.82
GAPVD1-210ENST00000461379 CC2D2BQ6DHV5 1058 aa20.15■□□□□ 0.82
GAPVD1-210ENST00000461379 TMC4Q7Z404 712 aa20.15■□□□□ 0.82
GAPVD1-210ENST00000461379 ITPRIPQ8IWB1 547 aa20.15■□□□□ 0.82
GAPVD1-210ENST00000461379 SP8Q8IXZ3 490 aa20.15■□□□□ 0.82
GAPVD1-210ENST00000461379 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.15■□□□□ 0.82
GAPVD1-210ENST00000461379 CDC5LQ99459 802 aaKnown RBP20.15■□□□□ 0.82
GAPVD1-210ENST00000461379 BRCA1P38398 1863 aaKnown RBP20.14■□□□□ 0.81
GAPVD1-210ENST00000461379 GNAI3P08754 354 aa20.14■□□□□ 0.81
GAPVD1-210ENST00000461379 RASSF7Q02833 373 aa20.14■□□□□ 0.81
GAPVD1-210ENST00000461379 RABL6Q3YEC7 729 aaPredicted RBP20.14■□□□□ 0.81
GAPVD1-210ENST00000461379 ANKRD18AQ8IVF6 992 aa20.14■□□□□ 0.81
GAPVD1-210ENST00000461379 RTKN2Q8IZC4 609 aa20.14■□□□□ 0.81
GAPVD1-210ENST00000461379 ANKRD44Q8N8A2 993 aa20.14■□□□□ 0.81
GAPVD1-210ENST00000461379 TMX4Q9H1E5 349 aaPredicted RBP20.14■□□□□ 0.81
GAPVD1-210ENST00000461379 IFIT5Q13325 482 aaKnown RBP20.13■□□□□ 0.81
GAPVD1-210ENST00000461379 HDAC5Q9UQL6 1122 aa20.13■□□□□ 0.81
GAPVD1-210ENST00000461379 LRRFIP2Q9Y608 721 aaKnown RBP20.13■□□□□ 0.81
GAPVD1-210ENST00000461379 SLX4Q8IY92 1834 aa20.12■□□□□ 0.81
GAPVD1-210ENST00000461379 ANKRD18BA2A2Z9 1011 aa20.12■□□□□ 0.81
GAPVD1-210ENST00000461379 TAOK3Q9H2K8 898 aa20.12■□□□□ 0.81
GAPVD1-210ENST00000461379 LAMB2P55268 1798 aa20.11■□□□□ 0.81
GAPVD1-210ENST00000461379 GOLGB1Q14789 3259 aaKnown RBP20.11■□□□□ 0.81
GAPVD1-210ENST00000461379 CCDC57Q2TAC2 916 aa20.11■□□□□ 0.81
GAPVD1-210ENST00000461379 GRIPAP1Q4V328 841 aa20.11■□□□□ 0.81
GAPVD1-210ENST00000461379 C20orf194Q5TEA3 1177 aa20.11■□□□□ 0.81
GAPVD1-210ENST00000461379 COL4A1P02462 1669 aa20.1■□□□□ 0.81
GAPVD1-210ENST00000461379 LTBP3Q9NS15 1303 aa20.1■□□□□ 0.81
GAPVD1-210ENST00000461379 ZBTB7BO15156 539 aaPredicted RBP20.1■□□□□ 0.81
GAPVD1-210ENST00000461379 IGHMBP2P38935 993 aaKnown RBP20.1■□□□□ 0.81
GAPVD1-210ENST00000461379 PRELPP51888 382 aa20.1■□□□□ 0.81
GAPVD1-210ENST00000461379 FKBP4Q02790 459 aaKnown RBP eCLIP20.1■□□□□ 0.81
GAPVD1-210ENST00000461379 PDE3AQ14432 1141 aa20.1■□□□□ 0.81
GAPVD1-210ENST00000461379 BSDC1Q9NW68 430 aaPredicted RBP20.1■□□□□ 0.81
GAPVD1-210ENST00000461379 SNED1Q8TER0 1413 aa20.1■□□□□ 0.81
GAPVD1-210ENST00000461379 RRP1P56182 461 aaKnown RBP20.09■□□□□ 0.81
GAPVD1-210ENST00000461379 C9orf131Q5VYM1 1079 aa20.09■□□□□ 0.81
GAPVD1-210ENST00000461379 MPNDQ8N594 471 aa20.09■□□□□ 0.81
GAPVD1-210ENST00000461379 ZNF594Q96JF6 807 aaPredicted RBP20.09■□□□□ 0.81
GAPVD1-210ENST00000461379 PSMD1Q99460 953 aa20.09■□□□□ 0.81
GAPVD1-210ENST00000461379 COG6Q9Y2V7 657 aa20.09■□□□□ 0.81
GAPVD1-210ENST00000461379 GNAI2P04899 355 aa20.08■□□□□ 0.81
GAPVD1-210ENST00000461379 LMNB1P20700 586 aa20.08■□□□□ 0.81
GAPVD1-210ENST00000461379 MVPQ14764 893 aaKnown RBP20.08■□□□□ 0.81
GAPVD1-210ENST00000461379 TAF7LQ5H9L4 462 aa20.08■□□□□ 0.81
GAPVD1-210ENST00000461379 DPP8Q6V1X1 898 aaPredicted RBP20.08■□□□□ 0.81
GAPVD1-210ENST00000461379 MPHOSPH8Q99549 860 aa20.08■□□□□ 0.81
GAPVD1-210ENST00000461379 NSFL1CQ9UNZ2 370 aaKnown RBP20.08■□□□□ 0.81
GAPVD1-210ENST00000461379 GPSM2P81274 684 aa20.07■□□□□ 0.8
GAPVD1-210ENST00000461379 ZNF277Q9NRM2 450 aaPredicted RBP20.07■□□□□ 0.8
GAPVD1-210ENST00000461379 RNF181Q9P0P0 153 aa20.07■□□□□ 0.8
GAPVD1-210ENST00000461379 MINPP1Q9UNW1 487 aa20.07■□□□□ 0.8
GAPVD1-210ENST00000461379 ARFGEF1Q9Y6D6 1849 aa20.06■□□□□ 0.8
GAPVD1-210ENST00000461379 RTFDC1Q9BY42 306 aaPredicted RBP20.06■□□□□ 0.8
GAPVD1-210ENST00000461379 LDHAL6AQ6ZMR3 332 aa20.05■□□□□ 0.8
GAPVD1-210ENST00000461379 ANKIB1Q9P2G1 1089 aa20.05■□□□□ 0.8
GAPVD1-210ENST00000461379 DDX19BQ9UMR2 479 aa20.05■□□□□ 0.8
GAPVD1-210ENST00000461379 RFX5P48382 616 aaPredicted RBP20.04■□□□□ 0.8
GAPVD1-210ENST00000461379 SUPT20HQ8NEM7 779 aa20.04■□□□□ 0.8
GAPVD1-210ENST00000461379 C1orf115Q9H7X2 142 aa20.04■□□□□ 0.8
GAPVD1-210ENST00000461379 PODXL2Q9NZ53 605 aa20.04■□□□□ 0.8
GAPVD1-210ENST00000461379 IARSP41252 1262 aaKnown RBP20.03■□□□□ 0.8
GAPVD1-210ENST00000461379 MTX1Q13505 466 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms