RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 TM6SF1Q9BZW5 370 aa24.36■■□□□ 1.49
CCM2-203ENST00000461377 NUTM2BA6NNL0 878 aaPredicted RBP24.35■■□□□ 1.49
CCM2-203ENST00000461377 NUTM2EB1AL46 878 aaPredicted RBP24.35■■□□□ 1.49
CCM2-203ENST00000461377 IL6STP40189 918 aaPredicted RBP24.35■■□□□ 1.49
CCM2-203ENST00000461377 CCDC57Q2TAC2 916 aa24.35■■□□□ 1.49
CCM2-203ENST00000461377 NLRP10Q86W26 655 aa24.35■■□□□ 1.49
CCM2-203ENST00000461377 NUTM2AQ8IVF1 878 aaPredicted RBP24.35■■□□□ 1.49
CCM2-203ENST00000461377 ARXQ96QS3 562 aa24.35■■□□□ 1.49
CCM2-203ENST00000461377 ZDHHC9Q9Y397 364 aa24.35■■□□□ 1.49
CCM2-203ENST00000461377 TOM1O60784 492 aa24.34■■□□□ 1.49
CCM2-203ENST00000461377 BARGINQ6ZT62 677 aa24.34■■□□□ 1.49
CCM2-203ENST00000461377 PUS3Q9BZE2 481 aaKnown RBP24.34■■□□□ 1.49
CCM2-203ENST00000461377 MARCH10Q8NA82 808 aaPredicted RBP24.34■■□□□ 1.49
CCM2-203ENST00000461377 ANKRD36CQ5JPF3 1778 aa24.34■■□□□ 1.49
CCM2-203ENST00000461377 ERVV-1B6SEH8 477 aa24.33■■□□□ 1.49
CCM2-203ENST00000461377 GOLGA6L22H0YM25 854 aa24.33■■□□□ 1.49
CCM2-203ENST00000461377 SKOR2Q2VWA4 1001 aaPredicted RBP24.33■■□□□ 1.49
CCM2-203ENST00000461377 CREB3L3Q68CJ9 461 aa24.33■■□□□ 1.49
CCM2-203ENST00000461377 NEUROD6Q96NK8 337 aa24.33■■□□□ 1.49
CCM2-203ENST00000461377 DNAJC2Q99543 621 aaKnown RBP24.33■■□□□ 1.49
CCM2-203ENST00000461377 CASTP20810 708 aaKnown RBP24.33■■□□□ 1.48
CCM2-203ENST00000461377 AK2P54819 239 aa24.33■■□□□ 1.48
CCM2-203ENST00000461377 ZSWIM6Q9HCJ5 1215 aa24.33■■□□□ 1.48
CCM2-203ENST00000461377 GPTP24298 496 aa24.32■■□□□ 1.48
CCM2-203ENST00000461377 TIMM10P62072 90 aa24.32■■□□□ 1.48
CCM2-203ENST00000461377 PIP4K2BP78356 416 aa24.32■■□□□ 1.48
CCM2-203ENST00000461377 ADCK5Q3MIX3 580 aa24.32■■□□□ 1.48
CCM2-203ENST00000461377 ZNF589Q86UQ0 364 aaPredicted RBP24.32■■□□□ 1.48
CCM2-203ENST00000461377 JAKMIP1Q96N16 626 aaKnown RBP24.32■■□□□ 1.48
CCM2-203ENST00000461377 NDUFB9Q9Y6M9 179 aa24.32■■□□□ 1.48
CCM2-203ENST00000461377 ZKSCAN1P17029 563 aaPredicted RBP24.31■■□□□ 1.48
CCM2-203ENST00000461377 A0A1B0GUL7 405 aa24.31■■□□□ 1.48
CCM2-203ENST00000461377 SLC27A2O14975 620 aa24.31■■□□□ 1.48
CCM2-203ENST00000461377 KCNJ4P48050 445 aa24.31■■□□□ 1.48
CCM2-203ENST00000461377 DZIP3Q86Y13 1208 aaKnown RBP24.31■■□□□ 1.48
CCM2-203ENST00000461377 KBTBD3Q8NAB2 608 aa24.31■■□□□ 1.48
CCM2-203ENST00000461377 CEP126Q9P2H0 1117 aa24.31■■□□□ 1.48
CCM2-203ENST00000461377 PALLDQ8WX93 1383 aa24.3■■□□□ 1.48
CCM2-203ENST00000461377 VPS53Q5VIR6 699 aa24.3■■□□□ 1.48
CCM2-203ENST00000461377 RUFY3Q7L099 469 aa24.3■■□□□ 1.48
CCM2-203ENST00000461377 TICAM2Q86XR7 235 aa24.3■■□□□ 1.48
CCM2-203ENST00000461377 LIMCH1Q9UPQ0 1083 aa24.3■■□□□ 1.48
CCM2-203ENST00000461377 RPAP1Q9BWH6 1393 aaPredicted RBP24.3■■□□□ 1.48
CCM2-203ENST00000461377 TAF5LO75529 589 aa24.29■■□□□ 1.48
CCM2-203ENST00000461377 IFIT5Q13325 482 aaKnown RBP24.29■■□□□ 1.48
CCM2-203ENST00000461377 ACSBG1Q96GR2 724 aa24.29■■□□□ 1.48
CCM2-203ENST00000461377 GZF1Q9H116 711 aaPredicted RBP24.29■■□□□ 1.48
CCM2-203ENST00000461377 CICQ96RK0 1608 aaPredicted RBP24.29■■□□□ 1.48
CCM2-203ENST00000461377 CPA1P15085 419 aa24.29■■□□□ 1.48
CCM2-203ENST00000461377 DDX46Q7L014 1031 aaKnown RBP24.29■■□□□ 1.48
CCM2-203ENST00000461377 SYNE4Q8N205 404 aa24.29■■□□□ 1.48
CCM2-203ENST00000461377 CYP46A1Q9Y6A2 500 aa24.29■■□□□ 1.48
CCM2-203ENST00000461377 BRD1O95696 1058 aa24.28■■□□□ 1.48
CCM2-203ENST00000461377 EIF5P55010 431 aaKnown RBP24.28■■□□□ 1.48
CCM2-203ENST00000461377 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.28■■□□□ 1.48
CCM2-203ENST00000461377 PDRG1Q9NUG6 133 aa24.28■■□□□ 1.48
CCM2-203ENST00000461377 CCDC9Q9Y3X0 531 aaKnown RBP24.28■■□□□ 1.48
CCM2-203ENST00000461377 RNF20Q5VTR2 975 aa24.27■■□□□ 1.48
CCM2-203ENST00000461377 INTS5Q6P9B9 1019 aaKnown RBP24.27■■□□□ 1.48
CCM2-203ENST00000461377 TTLL11Q8NHH1 800 aa24.27■■□□□ 1.48
CCM2-203ENST00000461377 CCDC87Q9NVE4 849 aa24.27■■□□□ 1.48
CCM2-203ENST00000461377 PAG1Q9NWQ8 432 aa24.27■■□□□ 1.48
CCM2-203ENST00000461377 TBC1D2BQ9UPU7 963 aa24.27■■□□□ 1.48
CCM2-203ENST00000461377 RREB1Q92766 1687 aa24.27■■□□□ 1.48
CCM2-203ENST00000461377 NUP98P52948 1817 aa24.27■■□□□ 1.48
CCM2-203ENST00000461377 CTSWP56202 376 aa24.27■■□□□ 1.48
CCM2-203ENST00000461377 TAF7LQ5H9L4 462 aa24.27■■□□□ 1.48
CCM2-203ENST00000461377 USPL1Q5W0Q7 1092 aa24.27■■□□□ 1.48
CCM2-203ENST00000461377 ZNF34Q8IZ26 560 aa24.27■■□□□ 1.48
CCM2-203ENST00000461377 CCDC85AQ96PX6 553 aaPredicted RBP24.27■■□□□ 1.48
CCM2-203ENST00000461377 HMG20BQ9P0W2 317 aa24.27■■□□□ 1.48
CCM2-203ENST00000461377 AKAP2Q9Y2D5 859 aa24.27■■□□□ 1.48
CCM2-203ENST00000461377 KAT6BQ8WYB5 2073 aa24.26■■□□□ 1.47
CCM2-203ENST00000461377 SH3TC1Q8TE82 1336 aa24.26■■□□□ 1.47
CCM2-203ENST00000461377 MCTP1Q6DN14 999 aa24.26■■□□□ 1.47
CCM2-203ENST00000461377 IRS4O14654 1257 aaPredicted RBP24.25■■□□□ 1.47
CCM2-203ENST00000461377 PSMA5P28066 241 aa24.25■■□□□ 1.47
CCM2-203ENST00000461377 ATP6V1AP38606 617 aa24.25■■□□□ 1.47
CCM2-203ENST00000461377 TSGA10IPQ3SY00 556 aa24.25■■□□□ 1.47
CCM2-203ENST00000461377 MCMDC2Q4G0Z9 681 aa24.25■■□□□ 1.47
CCM2-203ENST00000461377 TRMT112Q9UI30 125 aaKnown RBP24.25■■□□□ 1.47
CCM2-203ENST00000461377 UBN2Q6ZU65 1347 aa24.25■■□□□ 1.47
CCM2-203ENST00000461377 SPEF2Q9C093 1822 aa24.25■■□□□ 1.47
CCM2-203ENST00000461377 RIC1Q4ADV7 1423 aa24.25■■□□□ 1.47
CCM2-203ENST00000461377 LOC102724428A0A0B4J2F2 783 aa24.25■■□□□ 1.47
CCM2-203ENST00000461377 GOLIM4O00461 696 aa24.25■■□□□ 1.47
CCM2-203ENST00000461377 IFIT1P09914 478 aaKnown RBP24.25■■□□□ 1.47
CCM2-203ENST00000461377 SIK1P57059 783 aa24.25■■□□□ 1.47
CCM2-203ENST00000461377 A0A0G2JS52 829 aa24.24■■□□□ 1.47
CCM2-203ENST00000461377 FSD2A1L4K1 749 aa24.24■■□□□ 1.47
CCM2-203ENST00000461377 CHGBP05060 677 aa24.24■■□□□ 1.47
CCM2-203ENST00000461377 CRKLP46109 303 aaKnown RBP24.24■■□□□ 1.47
CCM2-203ENST00000461377 GREM2Q9H772 168 aa24.24■■□□□ 1.47
CCM2-203ENST00000461377 ITGA6P23229 1130 aa24.23■■□□□ 1.47
CCM2-203ENST00000461377 ZSCAN31Q96LW9 406 aaPredicted RBP24.23■■□□□ 1.47
CCM2-203ENST00000461377 SEC62Q99442 399 aaKnown RBP24.23■■□□□ 1.47
CCM2-203ENST00000461377 PDE8AO60658 829 aa24.23■■□□□ 1.47
CCM2-203ENST00000461377 ITPK1Q13572 414 aa24.23■■□□□ 1.47
CCM2-203ENST00000461377 L1TD1Q5T7N2 865 aaKnown RBP24.23■■□□□ 1.47
CCM2-203ENST00000461377 RIPOR2Q9Y4F9 1068 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms