RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 C4BP0C0L5 1744 aa9.1□□□□□ -0.95
LSG1-205ENST00000461343 RFX7Q2KHR2 1363 aa9.1□□□□□ -0.95
LSG1-205ENST00000461343 CARMIL3Q8ND23 1372 aa9.1□□□□□ -0.95
LSG1-205ENST00000461343 MYH3P11055 1940 aa9.09□□□□□ -0.95
LSG1-205ENST00000461343 TRIM37O94972 964 aa9.09□□□□□ -0.95
LSG1-205ENST00000461343 GPTP24298 496 aa9.09□□□□□ -0.95
LSG1-205ENST00000461343 HLFQ16534 295 aa9.09□□□□□ -0.95
LSG1-205ENST00000461343 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.09□□□□□ -0.95
LSG1-205ENST00000461343 EVI5LQ96CN4 794 aa9.09□□□□□ -0.95
LSG1-205ENST00000461343 FAM89AQ96GI7 184 aa9.09□□□□□ -0.95
LSG1-205ENST00000461343 MPHOSPH8Q99549 860 aa9.09□□□□□ -0.95
LSG1-205ENST00000461343 SALL3Q9BXA9 1300 aa9.08□□□□□ -0.96
LSG1-205ENST00000461343 TAF1LQ8IZX4 1826 aa9.08□□□□□ -0.96
LSG1-205ENST00000461343 RIC1Q4ADV7 1423 aa9.08□□□□□ -0.96
LSG1-205ENST00000461343 TRIM6-TRIM34B2RNG4 842 aa9.08□□□□□ -0.96
LSG1-205ENST00000461343 IGSF3O75054 1194 aa9.08□□□□□ -0.96
LSG1-205ENST00000461343 HOXD11P31277 338 aaPredicted RBP9.08□□□□□ -0.96
LSG1-205ENST00000461343 RFX5P48382 616 aaPredicted RBP9.08□□□□□ -0.96
LSG1-205ENST00000461343 CCDC158Q5M9N0 1113 aa9.08□□□□□ -0.96
LSG1-205ENST00000461343 SLC10A5Q5PT55 438 aa9.08□□□□□ -0.96
LSG1-205ENST00000461343 GORABQ5T7V8 394 aa9.08□□□□□ -0.96
LSG1-205ENST00000461343 LDHAL6AQ6ZMR3 332 aa9.08□□□□□ -0.96
LSG1-205ENST00000461343 NBPF5PQ86XG9 351 aaPredicted RBP9.08□□□□□ -0.96
LSG1-205ENST00000461343 CCDC125Q86Z20 511 aa9.08□□□□□ -0.96
LSG1-205ENST00000461343 TTLL11Q8NHH1 800 aa9.08□□□□□ -0.96
LSG1-205ENST00000461343 NLRP3Q96P20 1036 aa9.08□□□□□ -0.96
LSG1-205ENST00000461343 CNNM1Q9NRU3 951 aa9.08□□□□□ -0.96
LSG1-205ENST00000461343 MYH14Q7Z406 1995 aaKnown RBP9.08□□□□□ -0.96
LSG1-205ENST00000461343 BRWD3Q6RI45 1802 aa9.08□□□□□ -0.96
LSG1-205ENST00000461343 LAMB2P55268 1798 aa9.07□□□□□ -0.96
LSG1-205ENST00000461343 SMARCA5O60264 1052 aaPredicted RBP9.07□□□□□ -0.96
LSG1-205ENST00000461343 NTSR2O95665 410 aa9.07□□□□□ -0.96
LSG1-205ENST00000461343 APBA3O96018 575 aa9.07□□□□□ -0.96
LSG1-205ENST00000461343 ATP5JP18859 108 aa9.07□□□□□ -0.96
LSG1-205ENST00000461343 SDSP20132 328 aa9.07□□□□□ -0.96
LSG1-205ENST00000461343 ITGA6P23229 1130 aa9.07□□□□□ -0.96
LSG1-205ENST00000461343 MFAP1P55081 439 aaKnown RBP9.07□□□□□ -0.96
LSG1-205ENST00000461343 ST5P78524 1137 aa9.07□□□□□ -0.96
LSG1-205ENST00000461343 SF3B3Q15393 1217 aaKnown RBP9.07□□□□□ -0.96
LSG1-205ENST00000461343 TXNRD1Q16881 649 aa9.07□□□□□ -0.96
LSG1-205ENST00000461343 TNNI3KQ59H18 835 aa9.07□□□□□ -0.96
LSG1-205ENST00000461343 TMED8Q6PL24 325 aaPredicted RBP9.07□□□□□ -0.96
LSG1-205ENST00000461343 KIAA1211Q6ZU35 1233 aa9.07□□□□□ -0.96
LSG1-205ENST00000461343 TMC4Q7Z404 712 aa9.07□□□□□ -0.96
LSG1-205ENST00000461343 NLGN1Q8N2Q7 840 aa9.07□□□□□ -0.96
LSG1-205ENST00000461343 SIL1Q9H173 461 aa9.07□□□□□ -0.96
LSG1-205ENST00000461343 IL1RAPL2Q9NP60 686 aa9.07□□□□□ -0.96
LSG1-205ENST00000461343 FPGT-TNNI3KV9GXZ4 949 aa9.07□□□□□ -0.96
LSG1-205ENST00000461343 UBN2Q6ZU65 1347 aa9.06□□□□□ -0.96
LSG1-205ENST00000461343 RAD50Q92878 1312 aa9.06□□□□□ -0.96
LSG1-205ENST00000461343 UQCRFS1P1P0C7P4 283 aa9.06□□□□□ -0.96
LSG1-205ENST00000461343 PUM3Q15397 648 aaKnown RBP9.06□□□□□ -0.96
LSG1-205ENST00000461343 METTL24Q5JXM2 366 aa9.06□□□□□ -0.96
LSG1-205ENST00000461343 EPHA10Q5JZY3 1008 aa9.06□□□□□ -0.96
LSG1-205ENST00000461343 SUSD4Q5VX71 490 aa9.06□□□□□ -0.96
LSG1-205ENST00000461343 USPL1Q5W0Q7 1092 aa9.06□□□□□ -0.96
LSG1-205ENST00000461343 POTEHQ6S545 545 aa9.06□□□□□ -0.96
LSG1-205ENST00000461343 TBC1D9Q6ZT07 1266 aa9.06□□□□□ -0.96
LSG1-205ENST00000461343 ANKRD18AQ8IVF6 992 aa9.06□□□□□ -0.96
LSG1-205ENST00000461343 ARHGEF1Q92888 912 aaKnown RBP9.06□□□□□ -0.96
LSG1-205ENST00000461343 TBC1D32Q96NH3 1257 aa9.06□□□□□ -0.96
LSG1-205ENST00000461343 C22orf23Q9BZE7 217 aa9.06□□□□□ -0.96
LSG1-205ENST00000461343 DIAPH3Q9NSV4 1193 aa9.06□□□□□ -0.96
LSG1-205ENST00000461343 PA2G4Q9UQ80 394 aaKnown RBP9.06□□□□□ -0.96
LSG1-205ENST00000461343 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.05□□□□□ -0.96
LSG1-205ENST00000461343 SASH1O94885 1247 aa9.05□□□□□ -0.96
LSG1-205ENST00000461343 ZFYP08048 801 aaPredicted RBP9.05□□□□□ -0.96
LSG1-205ENST00000461343 IFIT1P09914 478 aaKnown RBP9.05□□□□□ -0.96
LSG1-205ENST00000461343 SLC5A1P13866 664 aa9.05□□□□□ -0.96
LSG1-205ENST00000461343 BAG6P46379 1132 aa9.05□□□□□ -0.96
LSG1-205ENST00000461343 RBM25P49756 843 aaKnown RBP9.05□□□□□ -0.96
LSG1-205ENST00000461343 TFCP2Q12800 502 aa9.05□□□□□ -0.96
LSG1-205ENST00000461343 TTF1Q15361 905 aaPredicted RBP9.05□□□□□ -0.96
LSG1-205ENST00000461343 ZSCAN25Q6NSZ9 544 aa9.05□□□□□ -0.96
LSG1-205ENST00000461343 CNBD1Q8NA66 436 aa9.05□□□□□ -0.96
LSG1-205ENST00000461343 LPIN2Q92539 896 aa9.05□□□□□ -0.96
LSG1-205ENST00000461343 RILPL2Q969X0 211 aa9.05□□□□□ -0.96
LSG1-205ENST00000461343 ZNF512BQ96KM6 892 aaPredicted RBP9.05□□□□□ -0.96
LSG1-205ENST00000461343 IPO9Q96P70 1041 aaKnown RBP9.05□□□□□ -0.96
LSG1-205ENST00000461343 ANKRD2Q9GZV1 360 aa9.05□□□□□ -0.96
LSG1-205ENST00000461343 TMX4Q9H1E5 349 aaPredicted RBP9.05□□□□□ -0.96
LSG1-205ENST00000461343 GNL3LQ9NVN8 582 aaKnown RBP9.05□□□□□ -0.96
LSG1-205ENST00000461343 TFCP2L1Q9NZI6 479 aa9.05□□□□□ -0.96
LSG1-205ENST00000461343 SPEF2Q9C093 1822 aa9.05□□□□□ -0.96
LSG1-205ENST00000461343 GSPT1P15170 499 aaKnown RBP9.04□□□□□ -0.96
LSG1-205ENST00000461343 ANAPC15P60006 121 aa9.04□□□□□ -0.96
LSG1-205ENST00000461343 ATP2B3Q16720 1220 aa9.04□□□□□ -0.96
LSG1-205ENST00000461343 RTL5Q5HYW3 569 aaPredicted RBP9.04□□□□□ -0.96
LSG1-205ENST00000461343 FAM182BQ5T319 152 aa9.04□□□□□ -0.96
LSG1-205ENST00000461343 DDX46Q7L014 1031 aaKnown RBP9.04□□□□□ -0.96
LSG1-205ENST00000461343 NUTM1Q86Y26 1132 aa9.04□□□□□ -0.96
LSG1-205ENST00000461343 C16orf71Q8IYS4 520 aaPredicted RBP9.04□□□□□ -0.96
LSG1-205ENST00000461343 PI4K2BQ8TCG2 481 aa9.04□□□□□ -0.96
LSG1-205ENST00000461343 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.04□□□□□ -0.96
LSG1-205ENST00000461343 COL24A1Q17RW2 1714 aa9.04□□□□□ -0.96
LSG1-205ENST00000461343 ZNF609O15014 1411 aa9.04□□□□□ -0.96
LSG1-205ENST00000461343 ZBTB22O15209 634 aa9.03□□□□□ -0.96
LSG1-205ENST00000461343 PDE8BO95263 885 aa9.03□□□□□ -0.96
LSG1-205ENST00000461343 TTC39AQ5SRH9 613 aa9.03□□□□□ -0.96
LSG1-205ENST00000461343 ERICH6Q7L0X2 663 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms