RNA–Protein interactions for RNA: ENST00000461173.5

DHFR2-203, Transcript of dihydrofolate reductase 2, humanhuman

TSL 1 (best)

Gene DHFR2, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-203ENST00000461173 PRIM1P49642 420 aaKnown RBP11.8□□□□□ -0.52
DHFR2-203ENST00000461173 TRIM28Q13263 835 aaKnown RBP11.8□□□□□ -0.52
DHFR2-203ENST00000461173 NBPF14Q5TI25 921 aa11.8□□□□□ -0.52
DHFR2-203ENST00000461173 NBPF10Q6P3W6 841 aaKnown RBP11.8□□□□□ -0.52
DHFR2-203ENST00000461173 NOL8Q76FK4 1167 aaKnown RBP11.8□□□□□ -0.52
DHFR2-203ENST00000461173 NBPF15Q8N660 670 aa11.8□□□□□ -0.52
DHFR2-203ENST00000461173 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.8□□□□□ -0.52
DHFR2-203ENST00000461173 A0A0D9SFI3 127 aa11.79□□□□□ -0.52
DHFR2-203ENST00000461173 TAF5LO75529 589 aa11.79□□□□□ -0.52
DHFR2-203ENST00000461173 IL15P40933 162 aaPredicted RBP11.79□□□□□ -0.52
DHFR2-203ENST00000461173 UBE2HP62256 183 aa11.79□□□□□ -0.52
DHFR2-203ENST00000461173 FOXO4P98177 505 aa11.79□□□□□ -0.52
DHFR2-203ENST00000461173 ADCK5Q3MIX3 580 aa11.79□□□□□ -0.52
DHFR2-203ENST00000461173 TOM1L2Q6ZVM7 507 aa11.79□□□□□ -0.52
DHFR2-203ENST00000461173 VSIG10Q8N0Z9 540 aa11.79□□□□□ -0.52
DHFR2-203ENST00000461173 FAM184AQ8NB25 1140 aa11.79□□□□□ -0.52
DHFR2-203ENST00000461173 TEX13AQ9BXU3 409 aaPredicted RBP11.79□□□□□ -0.52
DHFR2-203ENST00000461173 SIL1Q9H173 461 aa11.79□□□□□ -0.52
DHFR2-203ENST00000461173 PALLDQ8WX93 1383 aa11.79□□□□□ -0.52
DHFR2-203ENST00000461173 SPEF2Q9C093 1822 aa11.79□□□□□ -0.52
DHFR2-203ENST00000461173 RPS6KB1P23443 525 aa11.79□□□□□ -0.52
DHFR2-203ENST00000461173 KCNJ4P48050 445 aa11.79□□□□□ -0.52
DHFR2-203ENST00000461173 TFCP2Q12800 502 aa11.79□□□□□ -0.52
DHFR2-203ENST00000461173 BLOC1S2Q6QNY1 142 aa11.79□□□□□ -0.52
DHFR2-203ENST00000461173 U3KPZ7 1027 aaPredicted RBP11.79□□□□□ -0.52
DHFR2-203ENST00000461173 SH3TC1Q8TE82 1336 aa11.78□□□□□ -0.52
DHFR2-203ENST00000461173 ABCA3Q99758 1704 aa11.78□□□□□ -0.52
DHFR2-203ENST00000461173 USP48Q86UV5 1035 aa11.78□□□□□ -0.52
DHFR2-203ENST00000461173 KBTBD3Q8NAB2 608 aa11.78□□□□□ -0.52
DHFR2-203ENST00000461173 RBSNQ9H1K0 784 aa11.78□□□□□ -0.52
DHFR2-203ENST00000461173 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.78□□□□□ -0.52
DHFR2-203ENST00000461173 SLAIN2Q9P270 581 aa11.78□□□□□ -0.52
DHFR2-203ENST00000461173 MTMR6Q9Y217 621 aa11.78□□□□□ -0.52
DHFR2-203ENST00000461173 SHANK3Q9BYB0 1731 aa11.77□□□□□ -0.52
DHFR2-203ENST00000461173 GJB2P29033 226 aa11.77□□□□□ -0.52
DHFR2-203ENST00000461173 ME3Q16798 604 aa11.77□□□□□ -0.52
DHFR2-203ENST00000461173 UVSSAQ2YD98 709 aa11.77□□□□□ -0.52
DHFR2-203ENST00000461173 MCMDC2Q4G0Z9 681 aa11.77□□□□□ -0.52
DHFR2-203ENST00000461173 LMBR1LQ6UX01 489 aa11.77□□□□□ -0.52
DHFR2-203ENST00000461173 KLHDC4Q8TBB5 520 aa11.77□□□□□ -0.52
DHFR2-203ENST00000461173 ISCA1Q9BUE6 129 aa11.77□□□□□ -0.52
DHFR2-203ENST00000461173 PLA2G12BQ9BX93 195 aa11.77□□□□□ -0.52
DHFR2-203ENST00000461173 TJP1Q07157 1748 aa11.77□□□□□ -0.53
DHFR2-203ENST00000461173 HMGB1P09429 215 aaKnown RBP11.76□□□□□ -0.53
DHFR2-203ENST00000461173 CCDC183Q5T5S1 534 aa11.76□□□□□ -0.53
DHFR2-203ENST00000461173 PPP4R3CPQ6ZMV5 832 aa11.76□□□□□ -0.53
DHFR2-203ENST00000461173 ATG9AQ7Z3C6 839 aa11.76□□□□□ -0.53
DHFR2-203ENST00000461173 ZSCAN30Q86W11 494 aa11.76□□□□□ -0.53
DHFR2-203ENST00000461173 HELLSQ9NRZ9 838 aa11.76□□□□□ -0.53
DHFR2-203ENST00000461173 RBM27Q9P2N5 1060 aaKnown RBP11.76□□□□□ -0.53
DHFR2-203ENST00000461173 TPCN1Q9ULQ1 816 aa11.76□□□□□ -0.53
DHFR2-203ENST00000461173 NSFL1CQ9UNZ2 370 aaKnown RBP11.76□□□□□ -0.53
DHFR2-203ENST00000461173 SYCE3A1L190 88 aa11.76□□□□□ -0.53
DHFR2-203ENST00000461173 ATP5J2-PTCD1G3V325 749 aa11.76□□□□□ -0.53
DHFR2-203ENST00000461173 EYA2O00167 538 aa11.76□□□□□ -0.53
DHFR2-203ENST00000461173 PTCD1O75127 700 aaKnown RBP11.76□□□□□ -0.53
DHFR2-203ENST00000461173 ELP1O95163 1332 aa11.76□□□□□ -0.53
DHFR2-203ENST00000461173 LARGE1O95461 756 aa11.76□□□□□ -0.53
DHFR2-203ENST00000461173 MCM5P33992 734 aa11.76□□□□□ -0.53
DHFR2-203ENST00000461173 ST3GAL1Q11201 340 aa11.76□□□□□ -0.53
DHFR2-203ENST00000461173 FOXD4L5Q5VV16 416 aaPredicted RBP11.76□□□□□ -0.53
DHFR2-203ENST00000461173 ZNF589Q86UQ0 364 aaPredicted RBP11.76□□□□□ -0.53
DHFR2-203ENST00000461173 CCDC83Q8IWF9 413 aa11.76□□□□□ -0.53
DHFR2-203ENST00000461173 FOXD4L4Q8WXT5 416 aaPredicted RBP11.76□□□□□ -0.53
DHFR2-203ENST00000461173 ABCC12Q96J65 1359 aa11.76□□□□□ -0.53
DHFR2-203ENST00000461173 DBNDD2Q9BQY9 259 aa11.76□□□□□ -0.53
DHFR2-203ENST00000461173 TSPY26PQ9H489 355 aa11.76□□□□□ -0.53
DHFR2-203ENST00000461173 NHSL1Q5SYE7 1610 aa11.75□□□□□ -0.53
DHFR2-203ENST00000461173 LRRFIP1Q32MZ4 808 aaKnown RBP11.75□□□□□ -0.53
DHFR2-203ENST00000461173 GLIPR1L2Q4G1C9 344 aa11.75□□□□□ -0.53
DHFR2-203ENST00000461173 CHMP4CQ96CF2 233 aa11.75□□□□□ -0.53
DHFR2-203ENST00000461173 DSCC1Q9BVC3 393 aa11.75□□□□□ -0.53
DHFR2-203ENST00000461173 TCHHQ07283 1943 aa11.75□□□□□ -0.53
DHFR2-203ENST00000461173 STRCQ7RTU9 1775 aa11.75□□□□□ -0.53
DHFR2-203ENST00000461173 ZNF609O15014 1411 aa11.75□□□□□ -0.53
DHFR2-203ENST00000461173 CPA1P15085 419 aa11.74□□□□□ -0.53
DHFR2-203ENST00000461173 TTLL7Q6ZT98 887 aa11.74□□□□□ -0.53
DHFR2-203ENST00000461173 TCIRG1Q13488 830 aa11.74□□□□□ -0.53
DHFR2-203ENST00000461173 TOB2Q14106 344 aaPredicted RBP11.74□□□□□ -0.53
DHFR2-203ENST00000461173 CHAMP1Q96JM3 812 aa11.74□□□□□ -0.53
DHFR2-203ENST00000461173 NOL7Q9UMY1 257 aaKnown RBP11.74□□□□□ -0.53
DHFR2-203ENST00000461173 LRP6O75581 1613 aa11.74□□□□□ -0.53
DHFR2-203ENST00000461173 GADD45BO75293 160 aaPredicted RBP11.73□□□□□ -0.53
DHFR2-203ENST00000461173 A1BGP04217 495 aa11.73□□□□□ -0.53
DHFR2-203ENST00000461173 PIP4K2AP48426 406 aaPredicted RBP11.73□□□□□ -0.53
DHFR2-203ENST00000461173 ZMYM1Q5SVZ6 1142 aa11.73□□□□□ -0.53
DHFR2-203ENST00000461173 FBXL16Q8N461 479 aa11.73□□□□□ -0.53
DHFR2-203ENST00000461173 NEK1Q96PY6 1258 aa11.73□□□□□ -0.53
DHFR2-203ENST00000461173 LLPHQ9BRT6 129 aaKnown RBP11.73□□□□□ -0.53
DHFR2-203ENST00000461173 DNAJC5Q9H3Z4 198 aa11.73□□□□□ -0.53
DHFR2-203ENST00000461173 CNPY2Q9Y2B0 182 aa11.73□□□□□ -0.53
DHFR2-203ENST00000461173 AKAP2Q9Y2D5 859 aa11.73□□□□□ -0.53
DHFR2-203ENST00000461173 PCCAP05165 728 aaPredicted RBP11.72□□□□□ -0.53
DHFR2-203ENST00000461173 KRT85P78386 507 aa11.72□□□□□ -0.53
DHFR2-203ENST00000461173 LARP1BQ659C4 914 aaKnown RBP11.72□□□□□ -0.53
DHFR2-203ENST00000461173 AGXT2Q9BYV1 514 aa11.72□□□□□ -0.53
DHFR2-203ENST00000461173 PAG1Q9NWQ8 432 aa11.72□□□□□ -0.53
DHFR2-203ENST00000461173 TMOD3Q9NYL9 352 aa11.72□□□□□ -0.53
DHFR2-203ENST00000461173 CDHR2Q9BYE9 1310 aa11.72□□□□□ -0.53
DHFR2-203ENST00000461173 CSF1RP07333 972 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms