RNA–Protein interactions for RNA: ENST00000461071.1

SLC39A1-208, Transcript of solute carrier family 39 member 1, humanhuman

TSL 3

Gene SLC39A1, Length 529 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-208ENST00000461071 TMC4Q7Z404 712 aa22.75■■□□□ 1.23
SLC39A1-208ENST00000461071 MPNDQ8N594 471 aa22.75■■□□□ 1.23
SLC39A1-208ENST00000461071 TLL2Q9Y6L7 1015 aa22.75■■□□□ 1.23
SLC39A1-208ENST00000461071 SH3TC1Q8TE82 1336 aa22.75■■□□□ 1.23
SLC39A1-208ENST00000461071 DUOX1Q9NRD9 1551 aa22.75■■□□□ 1.23
SLC39A1-208ENST00000461071 TRAF5O00463 557 aa22.74■■□□□ 1.23
SLC39A1-208ENST00000461071 HCLS1P14317 486 aaPredicted RBP22.74■■□□□ 1.23
SLC39A1-208ENST00000461071 TRMT112Q9UI30 125 aaKnown RBP22.74■■□□□ 1.23
SLC39A1-208ENST00000461071 GMPSP49915 693 aaPredicted RBP22.73■■□□□ 1.23
SLC39A1-208ENST00000461071 GRAPQ13588 217 aa22.73■■□□□ 1.23
SLC39A1-208ENST00000461071 TNIP1Q15025 636 aa22.73■■□□□ 1.23
SLC39A1-208ENST00000461071 DDX46Q7L014 1031 aaKnown RBP22.73■■□□□ 1.23
SLC39A1-208ENST00000461071 GRAPLQ8TC17 118 aaPredicted RBP22.73■■□□□ 1.23
SLC39A1-208ENST00000461071 ZC3H15Q8WU90 426 aaKnown RBP22.73■■□□□ 1.23
SLC39A1-208ENST00000461071 MAP2K2P36507 400 aa22.72■■□□□ 1.23
SLC39A1-208ENST00000461071 CIAPIN1Q6FI81 312 aa22.72■■□□□ 1.23
SLC39A1-208ENST00000461071 HHIPL1Q96JK4 782 aa22.72■■□□□ 1.23
SLC39A1-208ENST00000461071 GPR101Q96P66 508 aaPredicted RBP22.72■■□□□ 1.23
SLC39A1-208ENST00000461071 HOXB7P09629 217 aa22.71■■□□□ 1.23
SLC39A1-208ENST00000461071 AIMP1Q12904 312 aaKnown RBP22.71■■□□□ 1.23
SLC39A1-208ENST00000461071 CYP4F22Q6NT55 531 aa22.7■■□□□ 1.22
SLC39A1-208ENST00000461071 SAPCD2Q86UD0 394 aa22.7■■□□□ 1.22
SLC39A1-208ENST00000461071 CASP8AP2Q9UKL3 1982 aa22.7■■□□□ 1.22
SLC39A1-208ENST00000461071 PLBD2Q8NHP8 589 aa22.69■■□□□ 1.22
SLC39A1-208ENST00000461071 NECTIN2Q92692 538 aa22.69■■□□□ 1.22
SLC39A1-208ENST00000461071 TRIM35Q9UPQ4 493 aa22.69■■□□□ 1.22
SLC39A1-208ENST00000461071 HIRAP54198 1017 aaPredicted RBP22.68■■□□□ 1.22
SLC39A1-208ENST00000461071 KRT24Q2M2I5 525 aa22.68■■□□□ 1.22
SLC39A1-208ENST00000461071 ABHD8Q96I13 439 aa22.68■■□□□ 1.22
SLC39A1-208ENST00000461071 BEGAINQ9BUH8 593 aa22.68■■□□□ 1.22
SLC39A1-208ENST00000461071 CHPF2Q9P2E5 772 aa22.68■■□□□ 1.22
SLC39A1-208ENST00000461071 YDJCA8MPS7 323 aa22.67■■□□□ 1.22
SLC39A1-208ENST00000461071 RAD17O75943 681 aa22.67■■□□□ 1.22
SLC39A1-208ENST00000461071 CELF2O95319 508 aaKnown RBP22.67■■□□□ 1.22
SLC39A1-208ENST00000461071 SF3B3Q15393 1217 aaKnown RBP22.67■■□□□ 1.22
SLC39A1-208ENST00000461071 ISCA1Q9BUE6 129 aa22.67■■□□□ 1.22
SLC39A1-208ENST00000461071 MYBBP1AQ9BQG0 1328 aaKnown RBP22.66■■□□□ 1.22
SLC39A1-208ENST00000461071 ANKRD13DQ6ZTN6 518 aa22.66■■□□□ 1.22
SLC39A1-208ENST00000461071 PAXIP1Q6ZW49 1069 aaPredicted RBP22.66■■□□□ 1.22
SLC39A1-208ENST00000461071 DPF2Q92785 391 aa22.66■■□□□ 1.22
SLC39A1-208ENST00000461071 RUNDC1Q96C34 613 aa22.66■■□□□ 1.22
SLC39A1-208ENST00000461071 BCL2L13Q9BXK5 485 aa22.66■■□□□ 1.22
SLC39A1-208ENST00000461071 GLIS2Q9BZE0 524 aaPredicted RBP22.66■■□□□ 1.22
SLC39A1-208ENST00000461071 DBF4Q9UBU7 674 aaPredicted RBP22.66■■□□□ 1.22
SLC39A1-208ENST00000461071 CNOT7Q9UIV1 285 aaKnown RBP22.66■■□□□ 1.22
SLC39A1-208ENST00000461071 SCN9AQ15858 1988 aa22.66■■□□□ 1.22
SLC39A1-208ENST00000461071 CA12O43570 354 aa22.65■■□□□ 1.22
SLC39A1-208ENST00000461071 TRIM28Q13263 835 aaKnown RBP22.65■■□□□ 1.22
SLC39A1-208ENST00000461071 HDGFL1Q5TGJ6 251 aa22.65■■□□□ 1.22
SLC39A1-208ENST00000461071 CDC37L1Q7L3B6 337 aa22.65■■□□□ 1.22
SLC39A1-208ENST00000461071 PSME4Q14997 1843 aa22.65■■□□□ 1.22
SLC39A1-208ENST00000461071 TRPM4Q8TD43 1214 aa22.64■■□□□ 1.21
SLC39A1-208ENST00000461071 COL4A1P02462 1669 aa22.64■■□□□ 1.21
SLC39A1-208ENST00000461071 AOC2O75106 756 aa22.63■■□□□ 1.21
SLC39A1-208ENST00000461071 NEUROD2Q15784 382 aa22.63■■□□□ 1.21
SLC39A1-208ENST00000461071 CCDC146Q8IYE0 955 aa22.63■■□□□ 1.21
SLC39A1-208ENST00000461071 HYPKQ9NX55 129 aa22.63■■□□□ 1.21
SLC39A1-208ENST00000461071 H7C1D1 291 aa22.62■■□□□ 1.21
SLC39A1-208ENST00000461071 BRPF1P55201 1214 aaPredicted RBP22.62■■□□□ 1.21
SLC39A1-208ENST00000461071 GRM1Q13255 1194 aa22.62■■□□□ 1.21
SLC39A1-208ENST00000461071 WASHC4Q2M389 1173 aa22.62■■□□□ 1.21
SLC39A1-208ENST00000461071 FAM89AQ96GI7 184 aa22.62■■□□□ 1.21
SLC39A1-208ENST00000461071 CFAP44Q96MT7 982 aa22.62■■□□□ 1.21
SLC39A1-208ENST00000461071 MICALL2Q8IY33 904 aa22.61■■□□□ 1.21
SLC39A1-208ENST00000461071 CELF1Q92879 486 aaKnown RBP22.61■■□□□ 1.21
SLC39A1-208ENST00000461071 AKAP11Q9UKA4 1901 aa22.61■■□□□ 1.21
SLC39A1-208ENST00000461071 SHTN1A0MZ66 631 aa22.6■■□□□ 1.21
SLC39A1-208ENST00000461071 RPS12P25398 132 aaKnown RBP22.6■■□□□ 1.21
SLC39A1-208ENST00000461071 POLLQ9UGP5 575 aa22.6■■□□□ 1.21
SLC39A1-208ENST00000461071 NSFL1CQ9UNZ2 370 aaKnown RBP22.6■■□□□ 1.21
SLC39A1-208ENST00000461071 LAS1LQ9Y4W2 734 aaKnown RBP22.6■■□□□ 1.21
SLC39A1-208ENST00000461071 PSMD14O00487 310 aa22.59■■□□□ 1.21
SLC39A1-208ENST00000461071 ATP5J2-PTCD1G3V325 749 aa22.58■■□□□ 1.21
SLC39A1-208ENST00000461071 WDR43Q15061 677 aaKnown RBP eCLIP22.58■■□□□ 1.21
SLC39A1-208ENST00000461071 DUSP27Q5VZP5 1158 aa22.58■■□□□ 1.21
SLC39A1-208ENST00000461071 ADAMTS8Q9UP79 889 aa22.58■■□□□ 1.21
SLC39A1-208ENST00000461071 MYH3P11055 1940 aa22.57■■□□□ 1.2
SLC39A1-208ENST00000461071 ZNF853P0CG23 659 aa22.57■■□□□ 1.2
SLC39A1-208ENST00000461071 RPS8P62241 208 aaKnown RBP22.57■■□□□ 1.2
SLC39A1-208ENST00000461071 GPSM2P81274 684 aa22.57■■□□□ 1.2
SLC39A1-208ENST00000461071 NOGQ13253 232 aa22.57■■□□□ 1.2
SLC39A1-208ENST00000461071 EYA3Q99504 573 aa22.57■■□□□ 1.2
SLC39A1-208ENST00000461071 PODXL2Q9NZ53 605 aa22.57■■□□□ 1.2
SLC39A1-208ENST00000461071 ZBTB12Q9Y330 459 aaPredicted RBP22.57■■□□□ 1.2
SLC39A1-208ENST00000461071 RTL9Q8NET4 1388 aa22.56■■□□□ 1.2
SLC39A1-208ENST00000461071 IRS4O14654 1257 aaPredicted RBP22.56■■□□□ 1.2
SLC39A1-208ENST00000461071 USP48Q86UV5 1035 aa22.56■■□□□ 1.2
SLC39A1-208ENST00000461071 TBC1D16Q8TBP0 767 aa22.56■■□□□ 1.2
SLC39A1-208ENST00000461071 DBNDD1Q9H9R9 158 aa22.56■■□□□ 1.2
SLC39A1-208ENST00000461071 MBIPQ9NS73 344 aa22.56■■□□□ 1.2
SLC39A1-208ENST00000461071 ZNF609O15014 1411 aa22.56■■□□□ 1.2
SLC39A1-208ENST00000461071 C6orf229H3BNL8 230 aa22.55■■□□□ 1.2
SLC39A1-208ENST00000461071 ECE2O60344 883 aa22.55■■□□□ 1.2
SLC39A1-208ENST00000461071 HSP90B1P14625 803 aaKnown RBP22.55■■□□□ 1.2
SLC39A1-208ENST00000461071 RGS19P49795 217 aa22.55■■□□□ 1.2
SLC39A1-208ENST00000461071 SAMD7Q7Z3H4 446 aa22.55■■□□□ 1.2
SLC39A1-208ENST00000461071 ZBTB38Q8NAP3 1195 aaPredicted RBP22.55■■□□□ 1.2
SLC39A1-208ENST00000461071 ZNF428Q96B54 188 aa22.55■■□□□ 1.2
SLC39A1-208ENST00000461071 ZNF408Q9H9D4 720 aa22.55■■□□□ 1.2
SLC39A1-208ENST00000461071 TSKSQ9UJT2 592 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms