RNA–Protein interactions for RNA: ENST00000461063.6

SOX2-OT-202, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 566 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-202ENST00000461063 HDGFL1Q5TGJ6 251 aa11.46□□□□□ -0.57
SOX2-OT-202ENST00000461063 PNMA8AQ86V59 439 aaPredicted RBP11.46□□□□□ -0.57
SOX2-OT-202ENST00000461063 CFAP44Q96MT7 982 aa11.46□□□□□ -0.57
SOX2-OT-202ENST00000461063 TRMT112Q9UI30 125 aaKnown RBP11.46□□□□□ -0.57
SOX2-OT-202ENST00000461063 GJA3Q9Y6H8 435 aa11.46□□□□□ -0.57
SOX2-OT-202ENST00000461063 SCN4AP35499 1836 aa11.46□□□□□ -0.58
SOX2-OT-202ENST00000461063 SH3TC1Q8TE82 1336 aa11.45□□□□□ -0.58
SOX2-OT-202ENST00000461063 BBOX1O75936 387 aa11.45□□□□□ -0.58
SOX2-OT-202ENST00000461063 TMX4Q9H1E5 349 aaPredicted RBP11.45□□□□□ -0.58
SOX2-OT-202ENST00000461063 MKRN1Q9UHC7 482 aaKnown RBP11.45□□□□□ -0.58
SOX2-OT-202ENST00000461063 PPIP5K2O43314 1243 aa11.44□□□□□ -0.58
SOX2-OT-202ENST00000461063 ZNF853P0CG23 659 aa11.44□□□□□ -0.58
SOX2-OT-202ENST00000461063 HSPA1AP0DMV8 641 aaKnown RBP11.44□□□□□ -0.58
SOX2-OT-202ENST00000461063 HSPA1BP0DMV9 641 aaKnown RBP11.44□□□□□ -0.58
SOX2-OT-202ENST00000461063 SCNN1DP51172 638 aa11.44□□□□□ -0.58
SOX2-OT-202ENST00000461063 AOC3Q16853 763 aa11.44□□□□□ -0.58
SOX2-OT-202ENST00000461063 ANKRD13DQ6ZTN6 518 aa11.44□□□□□ -0.58
SOX2-OT-202ENST00000461063 SP8Q8IXZ3 490 aa11.44□□□□□ -0.58
SOX2-OT-202ENST00000461063 NIM1KQ8IY84 436 aa11.44□□□□□ -0.58
SOX2-OT-202ENST00000461063 PLBD2Q8NHP8 589 aa11.44□□□□□ -0.58
SOX2-OT-202ENST00000461063 ZNF428Q96B54 188 aa11.44□□□□□ -0.58
SOX2-OT-202ENST00000461063 RTFDC1Q9BY42 306 aaPredicted RBP11.44□□□□□ -0.58
SOX2-OT-202ENST00000461063 VPS33BQ9H267 617 aa11.44□□□□□ -0.58
SOX2-OT-202ENST00000461063 MBIPQ9NS73 344 aa11.44□□□□□ -0.58
SOX2-OT-202ENST00000461063 DBF4Q9UBU7 674 aaPredicted RBP11.44□□□□□ -0.58
SOX2-OT-202ENST00000461063 ADAMTSL1Q8N6G6 1762 aa11.44□□□□□ -0.58
SOX2-OT-202ENST00000461063 TMEM88BA6NKF7 163 aa11.43□□□□□ -0.58
SOX2-OT-202ENST00000461063 APAF1O14727 1248 aa11.43□□□□□ -0.58
SOX2-OT-202ENST00000461063 GRAPQ13588 217 aa11.43□□□□□ -0.58
SOX2-OT-202ENST00000461063 DUSP27Q5VZP5 1158 aa11.43□□□□□ -0.58
SOX2-OT-202ENST00000461063 MAP1SQ66K74 1059 aaPredicted RBP11.43□□□□□ -0.58
SOX2-OT-202ENST00000461063 DDX46Q7L014 1031 aaKnown RBP11.43□□□□□ -0.58
SOX2-OT-202ENST00000461063 CNTROBQ8N137 903 aa11.43□□□□□ -0.58
SOX2-OT-202ENST00000461063 GRAPLQ8TC17 118 aaPredicted RBP11.43□□□□□ -0.58
SOX2-OT-202ENST00000461063 ISCA1Q9BUE6 129 aa11.43□□□□□ -0.58
SOX2-OT-202ENST00000461063 HYPKQ9NX55 129 aa11.43□□□□□ -0.58
SOX2-OT-202ENST00000461063 CNTNAP1P78357 1384 aa11.42□□□□□ -0.58
SOX2-OT-202ENST00000461063 SPDYE4A6NLX3 237 aa11.42□□□□□ -0.58
SOX2-OT-202ENST00000461063 ATP5J2-PTCD1G3V325 749 aa11.42□□□□□ -0.58
SOX2-OT-202ENST00000461063 LMOD1P29536 600 aaPredicted RBP11.42□□□□□ -0.58
SOX2-OT-202ENST00000461063 EPS15P42566 896 aa11.42□□□□□ -0.58
SOX2-OT-202ENST00000461063 DPP8Q6V1X1 898 aaPredicted RBP11.42□□□□□ -0.58
SOX2-OT-202ENST00000461063 MPNDQ8N594 471 aa11.42□□□□□ -0.58
SOX2-OT-202ENST00000461063 SUPT20HQ8NEM7 779 aa11.42□□□□□ -0.58
SOX2-OT-202ENST00000461063 FAM89AQ96GI7 184 aa11.42□□□□□ -0.58
SOX2-OT-202ENST00000461063 IFT57Q9NWB7 429 aa11.42□□□□□ -0.58
SOX2-OT-202ENST00000461063 ZNRF3Q9ULT6 936 aa11.42□□□□□ -0.58
SOX2-OT-202ENST00000461063 TRIM28Q13263 835 aaKnown RBP11.41□□□□□ -0.58
SOX2-OT-202ENST00000461063 ANKRD36CQ5JPF3 1778 aa11.41□□□□□ -0.58
SOX2-OT-202ENST00000461063 LTBP1Q14766 1721 aa11.4□□□□□ -0.58
SOX2-OT-202ENST00000461063 VEGFBP49765 207 aa11.4□□□□□ -0.58
SOX2-OT-202ENST00000461063 GNAI1P63096 354 aa11.4□□□□□ -0.58
SOX2-OT-202ENST00000461063 CALD1Q05682 793 aaKnown RBP11.4□□□□□ -0.58
SOX2-OT-202ENST00000461063 CXCL9Q07325 125 aa11.4□□□□□ -0.58
SOX2-OT-202ENST00000461063 KIAA2012Q0VF49 1180 aa11.4□□□□□ -0.58
SOX2-OT-202ENST00000461063 SF3B3Q15393 1217 aaKnown RBP11.4□□□□□ -0.58
SOX2-OT-202ENST00000461063 USP50Q70EL3 339 aaPredicted RBP11.4□□□□□ -0.58
SOX2-OT-202ENST00000461063 TMC4Q7Z404 712 aa11.4□□□□□ -0.58
SOX2-OT-202ENST00000461063 GPRC5DQ9NZD1 345 aa11.4□□□□□ -0.58
SOX2-OT-202ENST00000461063 RASSF10A6NK89 507 aa11.39□□□□□ -0.59
SOX2-OT-202ENST00000461063 ELL2O00472 640 aaPredicted RBP11.39□□□□□ -0.59
SOX2-OT-202ENST00000461063 RTL5Q5HYW3 569 aaPredicted RBP11.39□□□□□ -0.59
SOX2-OT-202ENST00000461063 TNS4Q8IZW8 715 aa11.39□□□□□ -0.59
SOX2-OT-202ENST00000461063 CELF1Q92879 486 aaKnown RBP11.39□□□□□ -0.59
SOX2-OT-202ENST00000461063 PHAXQ9H814 394 aaKnown RBP11.39□□□□□ -0.59
SOX2-OT-202ENST00000461063 ADARB2Q9NS39 739 aaKnown RBP11.39□□□□□ -0.59
SOX2-OT-202ENST00000461063 FARP1Q9Y4F1 1045 aaPredicted RBP11.39□□□□□ -0.59
SOX2-OT-202ENST00000461063 LAMB2P55268 1798 aa11.39□□□□□ -0.59
SOX2-OT-202ENST00000461063 IRS4O14654 1257 aaPredicted RBP11.38□□□□□ -0.59
SOX2-OT-202ENST00000461063 RAD17O75943 681 aa11.38□□□□□ -0.59
SOX2-OT-202ENST00000461063 GMPSP49915 693 aaPredicted RBP11.38□□□□□ -0.59
SOX2-OT-202ENST00000461063 FMR1Q06787 632 aaKnown RBP eCLIP11.38□□□□□ -0.59
SOX2-OT-202ENST00000461063 GOLGA2Q08379 1002 aa11.38□□□□□ -0.59
SOX2-OT-202ENST00000461063 CIAPIN1Q6FI81 312 aa11.38□□□□□ -0.59
SOX2-OT-202ENST00000461063 RIC3Q7Z5B4 369 aa11.38□□□□□ -0.59
SOX2-OT-202ENST00000461063 C8orf58Q8NAV2 365 aa11.38□□□□□ -0.59
SOX2-OT-202ENST00000461063 DUOX1Q9NRD9 1551 aa11.37□□□□□ -0.59
SOX2-OT-202ENST00000461063 YDJCA8MPS7 323 aa11.37□□□□□ -0.59
SOX2-OT-202ENST00000461063 TRAF5O00463 557 aa11.37□□□□□ -0.59
SOX2-OT-202ENST00000461063 FOXN1O15353 648 aa11.37□□□□□ -0.59
SOX2-OT-202ENST00000461063 GABBR2O75899 941 aa11.37□□□□□ -0.59
SOX2-OT-202ENST00000461063 TNIP1Q15025 636 aa11.37□□□□□ -0.59
SOX2-OT-202ENST00000461063 DEFB115Q30KQ5 88 aa11.37□□□□□ -0.59
SOX2-OT-202ENST00000461063 ZBTB38Q8NAP3 1195 aaPredicted RBP11.37□□□□□ -0.59
SOX2-OT-202ENST00000461063 CDHR2Q9BYE9 1310 aa11.36□□□□□ -0.59
SOX2-OT-202ENST00000461063 DDX60Q8IY21 1712 aaKnown RBP11.36□□□□□ -0.59
SOX2-OT-202ENST00000461063 GPSM2P81274 684 aa11.36□□□□□ -0.59
SOX2-OT-202ENST00000461063 WASHC4Q2M389 1173 aa11.36□□□□□ -0.59
SOX2-OT-202ENST00000461063 CCDC184Q52MB2 194 aa11.36□□□□□ -0.59
SOX2-OT-202ENST00000461063 MYD88Q99836 296 aa11.36□□□□□ -0.59
SOX2-OT-202ENST00000461063 BCL2L13Q9BXK5 485 aa11.36□□□□□ -0.59
SOX2-OT-202ENST00000461063 ABT1Q9ULW3 272 aaKnown RBP11.36□□□□□ -0.59
SOX2-OT-202ENST00000461063 NSFL1CQ9UNZ2 370 aaKnown RBP11.36□□□□□ -0.59
SOX2-OT-202ENST00000461063 COL4A1P02462 1669 aa11.36□□□□□ -0.59
SOX2-OT-202ENST00000461063 LRRC37AA6NMS7 1700 aa11.35□□□□□ -0.59
SOX2-OT-202ENST00000461063 HIRAP54198 1017 aaPredicted RBP11.35□□□□□ -0.59
SOX2-OT-202ENST00000461063 RPS8P62241 208 aaKnown RBP11.35□□□□□ -0.59
SOX2-OT-202ENST00000461063 CCDC30Q5VVM6 783 aa11.35□□□□□ -0.59
SOX2-OT-202ENST00000461063 CST9Q5W186 159 aa11.35□□□□□ -0.59
SOX2-OT-202ENST00000461063 TSPYL6Q8N831 410 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms