RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 YY1P25490 414 aa26.13■■□□□ 1.77
RPUSD3-210ENST00000460909 RASSF7Q02833 373 aa26.13■■□□□ 1.77
RPUSD3-210ENST00000460909 SLC51AQ86UW1 340 aa26.13■■□□□ 1.77
RPUSD3-210ENST00000460909 ARHGAP45Q92619 1136 aa26.13■■□□□ 1.77
RPUSD3-210ENST00000460909 GRM8O00222 908 aa26.12■■□□□ 1.77
RPUSD3-210ENST00000460909 PPEF1O14829 653 aaPredicted RBP26.12■■□□□ 1.77
RPUSD3-210ENST00000460909 BBOX1O75936 387 aa26.12■■□□□ 1.77
RPUSD3-210ENST00000460909 GRAPQ13588 217 aa26.12■■□□□ 1.77
RPUSD3-210ENST00000460909 GRAPLQ8TC17 118 aaPredicted RBP26.12■■□□□ 1.77
RPUSD3-210ENST00000460909 CTSWP56202 376 aa26.11■■□□□ 1.77
RPUSD3-210ENST00000460909 CCDC93Q567U6 631 aa26.11■■□□□ 1.77
RPUSD3-210ENST00000460909 TTLL11Q8NHH1 800 aa26.11■■□□□ 1.77
RPUSD3-210ENST00000460909 API5Q9BZZ5 524 aaKnown RBP26.11■■□□□ 1.77
RPUSD3-210ENST00000460909 LTBP3Q9NS15 1303 aa26.11■■□□□ 1.77
RPUSD3-210ENST00000460909 CCDC152Q4G0S7 254 aa26.1■■□□□ 1.77
RPUSD3-210ENST00000460909 CELF1Q92879 486 aaKnown RBP26.1■■□□□ 1.77
RPUSD3-210ENST00000460909 ATP6V0A2Q9Y487 856 aa26.1■■□□□ 1.77
RPUSD3-210ENST00000460909 CCDC88AQ3V6T2 1871 aa26.1■■□□□ 1.77
RPUSD3-210ENST00000460909 UTYO14607 1347 aa26.1■■□□□ 1.77
RPUSD3-210ENST00000460909 CC2D2BQ6DHV5 1058 aa26.09■■□□□ 1.77
RPUSD3-210ENST00000460909 SEC31BQ9NQW1 1179 aa26.09■■□□□ 1.77
RPUSD3-210ENST00000460909 CSF1RP07333 972 aa26.08■■□□□ 1.77
RPUSD3-210ENST00000460909 FOXO4P98177 505 aa26.08■■□□□ 1.77
RPUSD3-210ENST00000460909 RTKN2Q8IZC4 609 aa26.08■■□□□ 1.77
RPUSD3-210ENST00000460909 C9orf78Q9NZ63 289 aaPredicted RBP26.08■■□□□ 1.77
RPUSD3-210ENST00000460909 RTL9Q8NET4 1388 aa26.07■■□□□ 1.76
RPUSD3-210ENST00000460909 NBPF7P0C2Y1 421 aaPredicted RBP26.07■■□□□ 1.76
RPUSD3-210ENST00000460909 C9orf131Q5VYM1 1079 aa26.07■■□□□ 1.76
RPUSD3-210ENST00000460909 SP8Q8IXZ3 490 aa26.07■■□□□ 1.76
RPUSD3-210ENST00000460909 CCDC85AQ96PX6 553 aaPredicted RBP26.07■■□□□ 1.76
RPUSD3-210ENST00000460909 TAOK3Q9H2K8 898 aa26.07■■□□□ 1.76
RPUSD3-210ENST00000460909 LRRC37AA6NMS7 1700 aa26.07■■□□□ 1.76
RPUSD3-210ENST00000460909 TRIM27P14373 513 aa26.06■■□□□ 1.76
RPUSD3-210ENST00000460909 LMNB1P20700 586 aa26.06■■□□□ 1.76
RPUSD3-210ENST00000460909 USP44Q9H0E7 712 aa26.06■■□□□ 1.76
RPUSD3-210ENST00000460909 GREM2Q9H772 168 aa26.06■■□□□ 1.76
RPUSD3-210ENST00000460909 IPO8O15397 1037 aaKnown RBP26.05■■□□□ 1.76
RPUSD3-210ENST00000460909 CCT4P50991 539 aaKnown RBP26.05■■□□□ 1.76
RPUSD3-210ENST00000460909 RPS8P62241 208 aaKnown RBP26.05■■□□□ 1.76
RPUSD3-210ENST00000460909 FKBP4Q02790 459 aaKnown RBP eCLIP26.05■■□□□ 1.76
RPUSD3-210ENST00000460909 EPHA10Q5JZY3 1008 aa26.05■■□□□ 1.76
RPUSD3-210ENST00000460909 ATF7IPQ6VMQ6 1270 aa26.05■■□□□ 1.76
RPUSD3-210ENST00000460909 TMC4Q7Z404 712 aa26.05■■□□□ 1.76
RPUSD3-210ENST00000460909 FRAT1Q92837 279 aaPredicted RBP26.05■■□□□ 1.76
RPUSD3-210ENST00000460909 KAZALD1Q96I82 304 aa26.05■■□□□ 1.76
RPUSD3-210ENST00000460909 TNNQ9UQP3 1299 aa26.05■■□□□ 1.76
RPUSD3-210ENST00000460909 DICER1Q9UPY3 1922 aaKnown RBP26.04■■□□□ 1.76
RPUSD3-210ENST00000460909 GRIPAP1Q4V328 841 aa26.04■■□□□ 1.76
RPUSD3-210ENST00000460909 PSMD1Q99460 953 aa26.04■■□□□ 1.76
RPUSD3-210ENST00000460909 RNF181Q9P0P0 153 aa26.04■■□□□ 1.76
RPUSD3-210ENST00000460909 INTS3Q68E01 1043 aaKnown RBP26.03■■□□□ 1.76
RPUSD3-210ENST00000460909 SUCLG2Q96I99 432 aa26.02■■□□□ 1.76
RPUSD3-210ENST00000460909 YTHDC1Q96MU7 727 aaKnown RBP26.02■■□□□ 1.76
RPUSD3-210ENST00000460909 ZKSCAN2Q63HK3 967 aa26.01■■□□□ 1.75
RPUSD3-210ENST00000460909 FAM161AQ3B820 660 aa26■■□□□ 1.75
RPUSD3-210ENST00000460909 LTBP1Q14766 1721 aa26■■□□□ 1.75
RPUSD3-210ENST00000460909 TIAM2Q8IVF5 1701 aa26■■□□□ 1.75
RPUSD3-210ENST00000460909 ITGA6P23229 1130 aa25.99■■□□□ 1.75
RPUSD3-210ENST00000460909 LMBR1LQ6UX01 489 aa25.99■■□□□ 1.75
RPUSD3-210ENST00000460909 ZNF784Q8NCA9 323 aaPredicted RBP25.99■■□□□ 1.75
RPUSD3-210ENST00000460909 CDC5LQ99459 802 aaKnown RBP25.99■■□□□ 1.75
RPUSD3-210ENST00000460909 RTFDC1Q9BY42 306 aaPredicted RBP25.99■■□□□ 1.75
RPUSD3-210ENST00000460909 TMX4Q9H1E5 349 aaPredicted RBP25.99■■□□□ 1.75
RPUSD3-210ENST00000460909 ZNF277Q9NRM2 450 aaPredicted RBP25.99■■□□□ 1.75
RPUSD3-210ENST00000460909 DUOX1Q9NRD9 1551 aa25.99■■□□□ 1.75
RPUSD3-210ENST00000460909 SPEF2Q9C093 1822 aa25.98■■□□□ 1.75
RPUSD3-210ENST00000460909 ANKRD18AQ8IVF6 992 aa25.98■■□□□ 1.75
RPUSD3-210ENST00000460909 RABL6Q3YEC7 729 aaPredicted RBP25.97■■□□□ 1.75
RPUSD3-210ENST00000460909 MPNDQ8N594 471 aa25.97■■□□□ 1.75
RPUSD3-210ENST00000460909 CLUAP1Q96AJ1 413 aa25.97■■□□□ 1.75
RPUSD3-210ENST00000460909 RCAN3Q9UKA8 241 aa25.97■■□□□ 1.75
RPUSD3-210ENST00000460909 ZC3H4Q9UPT8 1303 aaKnown RBP25.96■■□□□ 1.75
RPUSD3-210ENST00000460909 IARSP41252 1262 aaKnown RBP25.96■■□□□ 1.75
RPUSD3-210ENST00000460909 BICC1Q9H694 974 aaKnown RBP25.96■■□□□ 1.75
RPUSD3-210ENST00000460909 GPSM2P81274 684 aa25.95■■□□□ 1.74
RPUSD3-210ENST00000460909 DPP8Q6V1X1 898 aaPredicted RBP25.95■■□□□ 1.74
RPUSD3-210ENST00000460909 ANKRD44Q8N8A2 993 aa25.95■■□□□ 1.74
RPUSD3-210ENST00000460909 BSDC1Q9NW68 430 aaPredicted RBP25.95■■□□□ 1.74
RPUSD3-210ENST00000460909 COL4A5P29400 1685 aa25.95■■□□□ 1.74
RPUSD3-210ENST00000460909 MEIS3Q99687 375 aa25.94■■□□□ 1.74
RPUSD3-210ENST00000460909 ANKRD18BA2A2Z9 1011 aa25.93■■□□□ 1.74
RPUSD3-210ENST00000460909 IFIT5Q13325 482 aaKnown RBP25.93■■□□□ 1.74
RPUSD3-210ENST00000460909 TMEM57Q8N5G2 664 aa25.93■■□□□ 1.74
RPUSD3-210ENST00000460909 PODXL2Q9NZ53 605 aa25.93■■□□□ 1.74
RPUSD3-210ENST00000460909 NSFL1CQ9UNZ2 370 aaKnown RBP25.93■■□□□ 1.74
RPUSD3-210ENST00000460909 RLBP1P12271 317 aa25.92■■□□□ 1.74
RPUSD3-210ENST00000460909 SUPT20HQ8NEM7 779 aa25.92■■□□□ 1.74
RPUSD3-210ENST00000460909 MINPP1Q9UNW1 487 aa25.92■■□□□ 1.74
RPUSD3-210ENST00000460909 CHMP3Q9Y3E7 222 aa25.92■■□□□ 1.74
RPUSD3-210ENST00000460909 UBTFL1P0CB47 393 aaPredicted RBP25.91■■□□□ 1.74
RPUSD3-210ENST00000460909 VPS33BQ9H267 617 aa25.91■■□□□ 1.74
RPUSD3-210ENST00000460909 POLLQ9UGP5 575 aa25.91■■□□□ 1.74
RPUSD3-210ENST00000460909 IGHMBP2P38935 993 aaKnown RBP25.9■■□□□ 1.74
RPUSD3-210ENST00000460909 CCDC57Q2TAC2 916 aa25.9■■□□□ 1.74
RPUSD3-210ENST00000460909 DZIP1LQ8IYY4 767 aaKnown RBP25.9■■□□□ 1.74
RPUSD3-210ENST00000460909 TBC1D16Q8TBP0 767 aa25.89■■□□□ 1.74
RPUSD3-210ENST00000460909 ZNF594Q96JF6 807 aaPredicted RBP25.89■■□□□ 1.74
RPUSD3-210ENST00000460909 KIAA2012Q0VF49 1180 aa25.88■■□□□ 1.73
RPUSD3-210ENST00000460909 AOC3Q16853 763 aa25.88■■□□□ 1.73
RPUSD3-210ENST00000460909 XDHP47989 1333 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms