RNA–Protein interactions for RNA: ENST00000460185.1

HLA-DQB1-207, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 428 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-207ENST00000460185 YY1P25490 414 aa13.26□□□□□ -0.29
HLA-DQB1-207ENST00000460185 TCIRG1Q13488 830 aa13.26□□□□□ -0.29
HLA-DQB1-207ENST00000460185 FER1L6Q2WGJ9 1857 aa13.26□□□□□ -0.29
HLA-DQB1-207ENST00000460185 TTLL6Q8N841 843 aa13.26□□□□□ -0.29
HLA-DQB1-207ENST00000460185 SBF1O95248 1867 aa13.25□□□□□ -0.29
HLA-DQB1-207ENST00000460185 TIAM2Q8IVF5 1701 aa13.25□□□□□ -0.29
HLA-DQB1-207ENST00000460185 ABCC12Q96J65 1359 aa13.25□□□□□ -0.29
HLA-DQB1-207ENST00000460185 CCDC24Q8N4L8 307 aa13.25□□□□□ -0.29
HLA-DQB1-207ENST00000460185 CNKSR1Q969H4 720 aa13.25□□□□□ -0.29
HLA-DQB1-207ENST00000460185 ZNF622Q969S3 477 aaKnown RBP eCLIP13.25□□□□□ -0.29
HLA-DQB1-207ENST00000460185 UTP14AQ9BVJ6 771 aaKnown RBP13.25□□□□□ -0.29
HLA-DQB1-207ENST00000460185 SLX4Q8IY92 1834 aa13.25□□□□□ -0.29
HLA-DQB1-207ENST00000460185 DICER1Q9UPY3 1922 aaKnown RBP13.24□□□□□ -0.29
HLA-DQB1-207ENST00000460185 NTSR2O95665 410 aa13.24□□□□□ -0.29
HLA-DQB1-207ENST00000460185 NPR1P16066 1061 aa13.24□□□□□ -0.29
HLA-DQB1-207ENST00000460185 KCNA3P22001 575 aa13.24□□□□□ -0.29
HLA-DQB1-207ENST00000460185 NEXNQ0ZGT2 675 aa13.24□□□□□ -0.29
HLA-DQB1-207ENST00000460185 STYK1Q6J9G0 422 aa13.24□□□□□ -0.29
HLA-DQB1-207ENST00000460185 MASTLQ96GX5 879 aa13.24□□□□□ -0.29
HLA-DQB1-207ENST00000460185 PHAXQ9H814 394 aaKnown RBP13.24□□□□□ -0.29
HLA-DQB1-207ENST00000460185 SH3TC1Q8TE82 1336 aa13.23□□□□□ -0.29
HLA-DQB1-207ENST00000460185 HSP90B1P14625 803 aaKnown RBP13.23□□□□□ -0.29
HLA-DQB1-207ENST00000460185 SOGA3Q5TF21 947 aa13.23□□□□□ -0.29
HLA-DQB1-207ENST00000460185 SUSD4Q5VX71 490 aa13.23□□□□□ -0.29
HLA-DQB1-207ENST00000460185 NLRP10Q86W26 655 aa13.23□□□□□ -0.29
HLA-DQB1-207ENST00000460185 NUTM1Q86Y26 1132 aa13.23□□□□□ -0.29
HLA-DQB1-207ENST00000460185 RPGRQ92834 1020 aaKnown RBP13.23□□□□□ -0.29
HLA-DQB1-207ENST00000460185 TRMT112Q9UI30 125 aaKnown RBP13.23□□□□□ -0.29
HLA-DQB1-207ENST00000460185 VAMP4O75379 141 aa13.22□□□□□ -0.29
HLA-DQB1-207ENST00000460185 SRGNP10124 158 aa13.22□□□□□ -0.29
HLA-DQB1-207ENST00000460185 FLIIQ13045 1269 aa13.22□□□□□ -0.29
HLA-DQB1-207ENST00000460185 FKBP5Q13451 457 aaPredicted RBP13.22□□□□□ -0.29
HLA-DQB1-207ENST00000460185 ERFEQ4G0M1 354 aa13.22□□□□□ -0.29
HLA-DQB1-207ENST00000460185 ZNF428Q96B54 188 aa13.22□□□□□ -0.29
HLA-DQB1-207ENST00000460185 KLRG2A4D1S0 409 aaPredicted RBP13.21□□□□□ -0.29
HLA-DQB1-207ENST00000460185 TCERG1O14776 1098 aaKnown RBP13.21□□□□□ -0.29
HLA-DQB1-207ENST00000460185 ALDH1B1P30837 517 aa13.21□□□□□ -0.29
HLA-DQB1-207ENST00000460185 HNRNPUQ00839 825 aaKnown RBP eCLIP13.21□□□□□ -0.29
HLA-DQB1-207ENST00000460185 SLFN5Q08AF3 891 aa13.21□□□□□ -0.29
HLA-DQB1-207ENST00000460185 KSR2Q6VAB6 950 aa13.21□□□□□ -0.29
HLA-DQB1-207ENST00000460185 ARHGAP27Q6ZUM4 889 aa13.21□□□□□ -0.29
HLA-DQB1-207ENST00000460185 NLRP3Q96P20 1036 aa13.21□□□□□ -0.29
HLA-DQB1-207ENST00000460185 MYD88Q99836 296 aa13.21□□□□□ -0.29
HLA-DQB1-207ENST00000460185 ISCA1Q9BUE6 129 aa13.21□□□□□ -0.29
HLA-DQB1-207ENST00000460185 MAP3K2Q9Y2U5 619 aa13.21□□□□□ -0.29
HLA-DQB1-207ENST00000460185 ATP5J2-PTCD1G3V325 749 aa13.2□□□□□ -0.3
HLA-DQB1-207ENST00000460185 CT47B1P0C2W7 299 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQB1-207ENST00000460185 TRIM28Q13263 835 aaKnown RBP13.2□□□□□ -0.3
HLA-DQB1-207ENST00000460185 CRY2Q49AN0 593 aa13.2□□□□□ -0.3
HLA-DQB1-207ENST00000460185 LCE2DQ5TA82 110 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQB1-207ENST00000460185 PRPF40BQ6NWY9 871 aaKnown RBP13.2□□□□□ -0.3
HLA-DQB1-207ENST00000460185 CCDC191Q8NCU4 936 aa13.2□□□□□ -0.3
HLA-DQB1-207ENST00000460185 METTL22Q9BUU2 404 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQB1-207ENST00000460185 CWC25Q9NXE8 425 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQB1-207ENST00000460185 ADCY9O60503 1353 aa13.2□□□□□ -0.3
HLA-DQB1-207ENST00000460185 PI4KAP2A4QPH2 592 aa13.19□□□□□ -0.3
HLA-DQB1-207ENST00000460185 PDCD7Q8N8D1 485 aaKnown RBP13.19□□□□□ -0.3
HLA-DQB1-207ENST00000460185 PI4KAP1Q8N8J0 262 aa13.19□□□□□ -0.3
HLA-DQB1-207ENST00000460185 RBM17Q96I25 401 aaKnown RBP13.19□□□□□ -0.3
HLA-DQB1-207ENST00000460185 TMX4Q9H1E5 349 aaPredicted RBP13.19□□□□□ -0.3
HLA-DQB1-207ENST00000460185 LRRC37AA6NMS7 1700 aa13.19□□□□□ -0.3
HLA-DQB1-207ENST00000460185 SPEF2Q9C093 1822 aa13.18□□□□□ -0.3
HLA-DQB1-207ENST00000460185 SLC10A5Q5PT55 438 aa13.18□□□□□ -0.3
HLA-DQB1-207ENST00000460185 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.18□□□□□ -0.3
HLA-DQB1-207ENST00000460185 TAF1P21675 1872 aa13.17□□□□□ -0.3
HLA-DQB1-207ENST00000460185 CCDC93Q567U6 631 aa13.17□□□□□ -0.3
HLA-DQB1-207ENST00000460185 G2E3Q7L622 706 aa13.17□□□□□ -0.3
HLA-DQB1-207ENST00000460185 ZBTB38Q8NAP3 1195 aaPredicted RBP13.17□□□□□ -0.3
HLA-DQB1-207ENST00000460185 DNAAF4Q8WXU2 420 aa13.17□□□□□ -0.3
HLA-DQB1-207ENST00000460185 ZBED9Q6R2W3 1325 aa13.16□□□□□ -0.3
HLA-DQB1-207ENST00000460185 C21orf2O43822 256 aa13.16□□□□□ -0.3
HLA-DQB1-207ENST00000460185 HOXA10P31260 410 aaPredicted RBP13.16□□□□□ -0.3
HLA-DQB1-207ENST00000460185 ALDH1L2Q3SY69 923 aa13.16□□□□□ -0.3
HLA-DQB1-207ENST00000460185 GRIPAP1Q4V328 841 aa13.16□□□□□ -0.3
HLA-DQB1-207ENST00000460185 CC2D2BQ6DHV5 1058 aa13.16□□□□□ -0.3
HLA-DQB1-207ENST00000460185 DDX46Q7L014 1031 aaKnown RBP13.16□□□□□ -0.3
HLA-DQB1-207ENST00000460185 CDCA7LQ96GN5 454 aa13.16□□□□□ -0.3
HLA-DQB1-207ENST00000460185 L3MBTL3Q96JM7 780 aaPredicted RBP13.16□□□□□ -0.3
HLA-DQB1-207ENST00000460185 CRAMP1Q96RY5 1269 aa13.16□□□□□ -0.3
HLA-DQB1-207ENST00000460185 TAOK3Q9H2K8 898 aa13.16□□□□□ -0.3
HLA-DQB1-207ENST00000460185 PLSCR2Q9NRY7 297 aa13.16□□□□□ -0.3
HLA-DQB1-207ENST00000460185 PTPRCP08575 1304 aa13.15□□□□□ -0.3
HLA-DQB1-207ENST00000460185 ZC3H4Q9UPT8 1303 aaKnown RBP13.15□□□□□ -0.3
HLA-DQB1-207ENST00000460185 IRS4O14654 1257 aaPredicted RBP13.15□□□□□ -0.3
HLA-DQB1-207ENST00000460185 PPEF1O14829 653 aaPredicted RBP13.15□□□□□ -0.3
HLA-DQB1-207ENST00000460185 PCCAP05165 728 aaPredicted RBP13.15□□□□□ -0.3
HLA-DQB1-207ENST00000460185 HCLS1P14317 486 aaPredicted RBP13.15□□□□□ -0.3
HLA-DQB1-207ENST00000460185 LINS1Q8NG48 757 aa13.15□□□□□ -0.3
HLA-DQB1-207ENST00000460185 FAM89AQ96GI7 184 aa13.15□□□□□ -0.3
HLA-DQB1-207ENST00000460185 SMC4Q9NTJ3 1288 aa13.15□□□□□ -0.3
HLA-DQB1-207ENST00000460185 CDHR2Q9BYE9 1310 aa13.14□□□□□ -0.31
HLA-DQB1-207ENST00000460185 LTBP3Q9NS15 1303 aa13.14□□□□□ -0.31
HLA-DQB1-207ENST00000460185 LMNB1P20700 586 aa13.14□□□□□ -0.31
HLA-DQB1-207ENST00000460185 RTL5Q5HYW3 569 aaPredicted RBP13.14□□□□□ -0.31
HLA-DQB1-207ENST00000460185 TMC4Q7Z404 712 aa13.14□□□□□ -0.31
HLA-DQB1-207ENST00000460185 TRMT2AQ8IZ69 625 aaKnown RBP13.14□□□□□ -0.31
HLA-DQB1-207ENST00000460185 RTKN2Q8IZC4 609 aa13.14□□□□□ -0.31
HLA-DQB1-207ENST00000460185 RNF181Q9P0P0 153 aa13.14□□□□□ -0.31
HLA-DQB1-207ENST00000460185 ABCC4O15439 1325 aa13.13□□□□□ -0.31
HLA-DQB1-207ENST00000460185 KIF16BQ96L93 1317 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms