RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 TUBB2AQ13885 445 aa10.13□□□□□ -0.79
SHROOM4-203ENST00000460112 GABPB2Q8TAK5 448 aaPredicted RBP10.13□□□□□ -0.79
SHROOM4-203ENST00000460112 TUBB2BQ9BVA1 445 aa10.13□□□□□ -0.79
SHROOM4-203ENST00000460112 GCC2Q8IWJ2 1684 aa10.13□□□□□ -0.79
SHROOM4-203ENST00000460112 PUF60Q9UHX1 559 aaKnown RBP10.13□□□□□ -0.79
SHROOM4-203ENST00000460112 SARNPP82979 210 aaKnown RBP10.13□□□□□ -0.79
SHROOM4-203ENST00000460112 FBF1Q8TES7 1133 aa10.13□□□□□ -0.79
SHROOM4-203ENST00000460112 RBM27Q9P2N5 1060 aaKnown RBP10.13□□□□□ -0.79
SHROOM4-203ENST00000460112 TCERG1LQ5VWI1 586 aa10.13□□□□□ -0.79
SHROOM4-203ENST00000460112 NAP1L3Q99457 506 aaPredicted RBP10.13□□□□□ -0.79
SHROOM4-203ENST00000460112 RBM28Q9NW13 759 aaKnown RBP10.13□□□□□ -0.79
SHROOM4-203ENST00000460112 ABCA10Q8WWZ4 1543 aa10.13□□□□□ -0.79
SHROOM4-203ENST00000460112 TTC21BQ7Z4L5 1316 aa10.13□□□□□ -0.79
SHROOM4-203ENST00000460112 CLCN1P35523 988 aa10.13□□□□□ -0.79
SHROOM4-203ENST00000460112 UBE2HP62256 183 aa10.13□□□□□ -0.79
SHROOM4-203ENST00000460112 CRNKL1Q9BZJ0 848 aaKnown RBP10.13□□□□□ -0.79
SHROOM4-203ENST00000460112 USP25Q9UHP3 1055 aa10.13□□□□□ -0.79
SHROOM4-203ENST00000460112 POLR1AO95602 1720 aaPredicted RBP10.13□□□□□ -0.79
SHROOM4-203ENST00000460112 PPP1R42Q7Z4L9 355 aa10.12□□□□□ -0.79
SHROOM4-203ENST00000460112 EVI5LQ96CN4 794 aa10.12□□□□□ -0.79
SHROOM4-203ENST00000460112 HDAC9Q9UKV0 1011 aa10.12□□□□□ -0.79
SHROOM4-203ENST00000460112 NAIPQ13075 1403 aa10.12□□□□□ -0.79
SHROOM4-203ENST00000460112 PRG4Q92954 1404 aaPredicted RBP10.12□□□□□ -0.79
SHROOM4-203ENST00000460112 MAP3K9P80192 1104 aa10.12□□□□□ -0.79
SHROOM4-203ENST00000460112 OTUD6BQ8N6M0 293 aa10.12□□□□□ -0.79
SHROOM4-203ENST00000460112 SYCE3A1L190 88 aa10.12□□□□□ -0.79
SHROOM4-203ENST00000460112 SPAG1Q07617 926 aa10.12□□□□□ -0.79
SHROOM4-203ENST00000460112 JADE2Q9NQC1 790 aa10.12□□□□□ -0.79
SHROOM4-203ENST00000460112 KRT23Q9C075 422 aa10.12□□□□□ -0.79
SHROOM4-203ENST00000460112 SPINK5Q9NQ38 1064 aaPredicted RBP10.12□□□□□ -0.79
SHROOM4-203ENST00000460112 CABP1Q9NZU7 370 aa10.12□□□□□ -0.79
SHROOM4-203ENST00000460112 BCAR3O75815 825 aa10.12□□□□□ -0.79
SHROOM4-203ENST00000460112 PRPF4BQ13523 1007 aaKnown RBP10.12□□□□□ -0.79
SHROOM4-203ENST00000460112 CAMK4Q16566 473 aa10.12□□□□□ -0.79
SHROOM4-203ENST00000460112 MFSD6Q6ZSS7 791 aa10.12□□□□□ -0.79
SHROOM4-203ENST00000460112 PRPF31Q8WWY3 499 aaKnown RBP10.12□□□□□ -0.79
SHROOM4-203ENST00000460112 C11orf95C9JLR9 678 aaPredicted RBP10.12□□□□□ -0.79
SHROOM4-203ENST00000460112 ARL1P40616 181 aaPredicted RBP10.12□□□□□ -0.79
SHROOM4-203ENST00000460112 MXRA7P84157 204 aa10.12□□□□□ -0.79
SHROOM4-203ENST00000460112 MSL1Q68DK7 614 aa10.12□□□□□ -0.79
SHROOM4-203ENST00000460112 TSR2Q969E8 191 aaKnown RBP10.12□□□□□ -0.79
SHROOM4-203ENST00000460112 CNNM2Q9H8M5 875 aa10.12□□□□□ -0.79
SHROOM4-203ENST00000460112 RUSC2Q8N2Y8 1516 aa10.12□□□□□ -0.79
SHROOM4-203ENST00000460112 LIMCH1Q9UPQ0 1083 aa10.12□□□□□ -0.79
SHROOM4-203ENST00000460112 IFIT3O14879 490 aaKnown RBP10.11□□□□□ -0.79
SHROOM4-203ENST00000460112 PRPF40BQ6NWY9 871 aaKnown RBP10.11□□□□□ -0.79
SHROOM4-203ENST00000460112 CEP83Q9Y592 693 aa10.11□□□□□ -0.79
SHROOM4-203ENST00000460112 NOP2P46087 812 aaKnown RBP10.11□□□□□ -0.79
SHROOM4-203ENST00000460112 ASXL1Q8IXJ9 1541 aa10.11□□□□□ -0.79
SHROOM4-203ENST00000460112 NBPF7P0C2Y1 421 aaPredicted RBP10.11□□□□□ -0.79
SHROOM4-203ENST00000460112 ZNF354CQ86Y25 554 aa10.11□□□□□ -0.79
SHROOM4-203ENST00000460112 TMTC2Q8N394 836 aa10.11□□□□□ -0.79
SHROOM4-203ENST00000460112 KDM5AP29375 1690 aaKnown RBP10.11□□□□□ -0.79
SHROOM4-203ENST00000460112 NSD3Q9BZ95 1437 aa10.11□□□□□ -0.79
SHROOM4-203ENST00000460112 CA8P35219 290 aa10.11□□□□□ -0.79
SHROOM4-203ENST00000460112 UBA7P41226 1012 aa10.11□□□□□ -0.79
SHROOM4-203ENST00000460112 OPA1O60313 960 aa10.11□□□□□ -0.79
SHROOM4-203ENST00000460112 MYCNP04198 464 aaPredicted RBP10.11□□□□□ -0.79
SHROOM4-203ENST00000460112 ARID4AP29374 1257 aaPredicted RBP10.11□□□□□ -0.79
SHROOM4-203ENST00000460112 CYLC1P35663 651 aaPredicted RBP10.11□□□□□ -0.79
SHROOM4-203ENST00000460112 PSMD1Q99460 953 aa10.11□□□□□ -0.79
SHROOM4-203ENST00000460112 MAP7Q14244 749 aa10.11□□□□□ -0.79
SHROOM4-203ENST00000460112 URI1O94763 535 aaPredicted RBP10.1□□□□□ -0.79
SHROOM4-203ENST00000460112 GNAQP50148 359 aa10.1□□□□□ -0.79
SHROOM4-203ENST00000460112 CCDC6Q16204 474 aa10.1□□□□□ -0.79
SHROOM4-203ENST00000460112 ERCC6LQ2NKX8 1250 aa10.1□□□□□ -0.79
SHROOM4-203ENST00000460112 KRT222Q8N1A0 295 aa10.1□□□□□ -0.79
SHROOM4-203ENST00000460112 FAM184BQ9ULE4 1060 aa10.1□□□□□ -0.79
SHROOM4-203ENST00000460112 MAGI1Q96QZ7 1491 aaPredicted RBP10.1□□□□□ -0.79
SHROOM4-203ENST00000460112 HOMEZQ8IX15 550 aa10.1□□□□□ -0.79
SHROOM4-203ENST00000460112 PUS7Q96PZ0 661 aaKnown RBP10.1□□□□□ -0.79
SHROOM4-203ENST00000460112 TAF7Q15545 349 aaPredicted RBP10.1□□□□□ -0.79
SHROOM4-203ENST00000460112 TRMT112Q9UI30 125 aaKnown RBP10.1□□□□□ -0.79
SHROOM4-203ENST00000460112 KIAA0586Q9BVV6 1533 aa10.1□□□□□ -0.79
SHROOM4-203ENST00000460112 PHACTR2O75167 634 aa10.1□□□□□ -0.79
SHROOM4-203ENST00000460112 GTF2F1P35269 517 aaKnown RBP eCLIP10.1□□□□□ -0.79
SHROOM4-203ENST00000460112 SMC1BQ8NDV3 1235 aa10.1□□□□□ -0.79
SHROOM4-203ENST00000460112 MYO10Q9HD67 2058 aa10.1□□□□□ -0.79
SHROOM4-203ENST00000460112 UQCRFS1P1P0C7P4 283 aa10.1□□□□□ -0.79
SHROOM4-203ENST00000460112 LIG1P18858 919 aa10.1□□□□□ -0.79
SHROOM4-203ENST00000460112 DMRT2Q9Y5R5 561 aa10.1□□□□□ -0.79
SHROOM4-203ENST00000460112 RAD54L2Q9Y4B4 1467 aa10.1□□□□□ -0.79
SHROOM4-203ENST00000460112 ARHGAP45Q92619 1136 aa10.1□□□□□ -0.79
SHROOM4-203ENST00000460112 RTL9Q8NET4 1388 aa10.1□□□□□ -0.79
SHROOM4-203ENST00000460112 TOPBP1Q92547 1522 aa10.09□□□□□ -0.79
SHROOM4-203ENST00000460112 NAP1L4Q99733 375 aaKnown RBP10.09□□□□□ -0.79
SHROOM4-203ENST00000460112 TSGA10Q9BZW7 698 aa10.09□□□□□ -0.79
SHROOM4-203ENST00000460112 NCOA7Q8NI08 942 aa10.09□□□□□ -0.79
SHROOM4-203ENST00000460112 SNW1Q13573 536 aaKnown RBP10.09□□□□□ -0.79
SHROOM4-203ENST00000460112 CCDC102BQ68D86 513 aa10.09□□□□□ -0.79
SHROOM4-203ENST00000460112 ARFGAP3Q9NP61 516 aa10.09□□□□□ -0.79
SHROOM4-203ENST00000460112 TXNDC16Q9P2K2 825 aa10.09□□□□□ -0.79
SHROOM4-203ENST00000460112 ATP5DP30049 168 aa10.09□□□□□ -0.79
SHROOM4-203ENST00000460112 IARSP41252 1262 aaKnown RBP10.09□□□□□ -0.79
SHROOM4-203ENST00000460112 AFAP1L2Q8N4X5 818 aa10.09□□□□□ -0.79
SHROOM4-203ENST00000460112 BICDL2A1A5D9 508 aa10.09□□□□□ -0.79
SHROOM4-203ENST00000460112 TPD52P55327 224 aaPredicted RBP10.09□□□□□ -0.79
SHROOM4-203ENST00000460112 TRIM47Q96LD4 638 aa10.09□□□□□ -0.79
SHROOM4-203ENST00000460112 METAP2P50579 478 aaKnown RBP eCLIP10.09□□□□□ -0.79
SHROOM4-203ENST00000460112 TMEM67Q5HYA8 995 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms