RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 HAND2P61296 217 aa11.23□□□□□ -0.61
NUDCD3-203ENST00000460110 UBE2Q2Q8WVN8 375 aa11.23□□□□□ -0.61
NUDCD3-203ENST00000460110 SEC31BQ9NQW1 1179 aa11.23□□□□□ -0.61
NUDCD3-203ENST00000460110 ERBB4Q15303 1308 aa11.23□□□□□ -0.61
NUDCD3-203ENST00000460110 STRCQ7RTU9 1775 aa11.23□□□□□ -0.61
NUDCD3-203ENST00000460110 ATP2B3Q16720 1220 aa11.23□□□□□ -0.61
NUDCD3-203ENST00000460110 VPS37DQ86XT2 251 aa11.23□□□□□ -0.61
NUDCD3-203ENST00000460110 ANTXR1Q9H6X2 564 aa11.23□□□□□ -0.61
NUDCD3-203ENST00000460110 ZPR1O75312 459 aa11.23□□□□□ -0.61
NUDCD3-203ENST00000460110 NECAB1Q8N987 351 aa11.23□□□□□ -0.61
NUDCD3-203ENST00000460110 ZBTB38Q8NAP3 1195 aaPredicted RBP11.23□□□□□ -0.61
NUDCD3-203ENST00000460110 SNX21Q969T3 373 aa11.22□□□□□ -0.61
NUDCD3-203ENST00000460110 CCNL1Q9UK58 526 aaPredicted RBP11.22□□□□□ -0.61
NUDCD3-203ENST00000460110 RNF20Q5VTR2 975 aa11.22□□□□□ -0.61
NUDCD3-203ENST00000460110 XAGE2Q96GT9 111 aa11.22□□□□□ -0.61
NUDCD3-203ENST00000460110 UTP14AQ9BVJ6 771 aaKnown RBP11.22□□□□□ -0.61
NUDCD3-203ENST00000460110 PAG1Q9NWQ8 432 aa11.22□□□□□ -0.61
NUDCD3-203ENST00000460110 SRP68Q9UHB9 627 aaKnown RBP11.22□□□□□ -0.61
NUDCD3-203ENST00000460110 CYP46A1Q9Y6A2 500 aa11.22□□□□□ -0.61
NUDCD3-203ENST00000460110 DDX49Q9Y6V7 483 aaKnown RBP11.22□□□□□ -0.61
NUDCD3-203ENST00000460110 VPS37CA5D8V6 355 aaPredicted RBP11.22□□□□□ -0.61
NUDCD3-203ENST00000460110 TRAK2O60296 914 aa11.22□□□□□ -0.61
NUDCD3-203ENST00000460110 SUSD4Q5VX71 490 aa11.22□□□□□ -0.61
NUDCD3-203ENST00000460110 ZNF589Q86UQ0 364 aaPredicted RBP11.22□□□□□ -0.61
NUDCD3-203ENST00000460110 CCDC83Q8IWF9 413 aa11.22□□□□□ -0.61
NUDCD3-203ENST00000460110 PDRG1Q9NUG6 133 aa11.22□□□□□ -0.61
NUDCD3-203ENST00000460110 ABCF2Q9UG63 623 aa11.22□□□□□ -0.61
NUDCD3-203ENST00000460110 JAG2Q9Y219 1238 aa11.22□□□□□ -0.61
NUDCD3-203ENST00000460110 SALL3Q9BXA9 1300 aa11.22□□□□□ -0.61
NUDCD3-203ENST00000460110 PALLDQ8WX93 1383 aa11.22□□□□□ -0.61
NUDCD3-203ENST00000460110 ADCK5Q3MIX3 580 aa11.21□□□□□ -0.61
NUDCD3-203ENST00000460110 CHST3Q7LGC8 479 aa11.21□□□□□ -0.61
NUDCD3-203ENST00000460110 SNX14Q9Y5W7 946 aa11.21□□□□□ -0.61
NUDCD3-203ENST00000460110 SPATA31A5Q5VU36 1347 aa11.21□□□□□ -0.61
NUDCD3-203ENST00000460110 SPATA31A7Q8IWB4 1347 aa11.21□□□□□ -0.61
NUDCD3-203ENST00000460110 SH3TC1Q8TE82 1336 aa11.21□□□□□ -0.61
NUDCD3-203ENST00000460110 HIP1O00291 1037 aa11.21□□□□□ -0.61
NUDCD3-203ENST00000460110 PCCAP05165 728 aaPredicted RBP11.21□□□□□ -0.61
NUDCD3-203ENST00000460110 RFX5P48382 616 aaPredicted RBP11.21□□□□□ -0.61
NUDCD3-203ENST00000460110 ISCA1Q9BUE6 129 aa11.21□□□□□ -0.61
NUDCD3-203ENST00000460110 ALS2Q96Q42 1657 aa11.21□□□□□ -0.62
NUDCD3-203ENST00000460110 IGHMBP2P38935 993 aaKnown RBP11.21□□□□□ -0.62
NUDCD3-203ENST00000460110 IL6STP40189 918 aaPredicted RBP11.21□□□□□ -0.62
NUDCD3-203ENST00000460110 VSIG10Q8N0Z9 540 aa11.21□□□□□ -0.62
NUDCD3-203ENST00000460110 SMARCC1Q92922 1105 aaPredicted RBP11.21□□□□□ -0.62
NUDCD3-203ENST00000460110 CTSWP56202 376 aa11.2□□□□□ -0.62
NUDCD3-203ENST00000460110 BLOC1S2Q6QNY1 142 aa11.2□□□□□ -0.62
NUDCD3-203ENST00000460110 RAB11FIP4Q86YS3 637 aa11.2□□□□□ -0.62
NUDCD3-203ENST00000460110 TTLL11Q8NHH1 800 aa11.2□□□□□ -0.62
NUDCD3-203ENST00000460110 GDPD2Q9HCC8 539 aa11.2□□□□□ -0.62
NUDCD3-203ENST00000460110 SMC3Q9UQE7 1217 aa11.2□□□□□ -0.62
NUDCD3-203ENST00000460110 AKAP2Q9Y2D5 859 aa11.2□□□□□ -0.62
NUDCD3-203ENST00000460110 PRPF40AO75400 957 aaKnown RBP11.2□□□□□ -0.62
NUDCD3-203ENST00000460110 ATG9AQ7Z3C6 839 aa11.2□□□□□ -0.62
NUDCD3-203ENST00000460110 NBPF5PQ86XG9 351 aaPredicted RBP11.2□□□□□ -0.62
NUDCD3-203ENST00000460110 ZNF652Q9Y2D9 606 aa11.2□□□□□ -0.62
NUDCD3-203ENST00000460110 AK2P54819 239 aa11.2□□□□□ -0.62
NUDCD3-203ENST00000460110 CCDC171Q6TFL3 1326 aa11.19□□□□□ -0.62
NUDCD3-203ENST00000460110 PDE8AO60658 829 aa11.19□□□□□ -0.62
NUDCD3-203ENST00000460110 ZAP70P43403 619 aa11.19□□□□□ -0.62
NUDCD3-203ENST00000460110 USPL1Q5W0Q7 1092 aa11.19□□□□□ -0.62
NUDCD3-203ENST00000460110 CREB3L3Q68CJ9 461 aa11.19□□□□□ -0.62
NUDCD3-203ENST00000460110 LSG1Q9H089 658 aaKnown RBP11.19□□□□□ -0.62
NUDCD3-203ENST00000460110 QTRT2Q9H974 415 aaKnown RBP11.19□□□□□ -0.62
NUDCD3-203ENST00000460110 UTYO14607 1347 aa11.19□□□□□ -0.62
NUDCD3-203ENST00000460110 AFF2P51816 1311 aa11.19□□□□□ -0.62
NUDCD3-203ENST00000460110 RAD50Q92878 1312 aa11.19□□□□□ -0.62
NUDCD3-203ENST00000460110 PXDNLA1KZ92 1463 aa11.19□□□□□ -0.62
NUDCD3-203ENST00000460110 ATP5JP18859 108 aa11.19□□□□□ -0.62
NUDCD3-203ENST00000460110 RFC4P35249 363 aa11.19□□□□□ -0.62
NUDCD3-203ENST00000460110 CASP7P55210 303 aa11.19□□□□□ -0.62
NUDCD3-203ENST00000460110 RABL6Q3YEC7 729 aaPredicted RBP11.19□□□□□ -0.62
NUDCD3-203ENST00000460110 AOX1Q06278 1338 aa11.19□□□□□ -0.62
NUDCD3-203ENST00000460110 FERMT3Q86UX7 667 aa11.18□□□□□ -0.62
NUDCD3-203ENST00000460110 HSPA4P34932 840 aa11.18□□□□□ -0.62
NUDCD3-203ENST00000460110 CHMP4CQ96CF2 233 aa11.18□□□□□ -0.62
NUDCD3-203ENST00000460110 DDX11Q96FC9 970 aa11.18□□□□□ -0.62
NUDCD3-203ENST00000460110 AK7Q96M32 723 aa11.18□□□□□ -0.62
NUDCD3-203ENST00000460110 SETDB2Q96T68 719 aa11.18□□□□□ -0.62
NUDCD3-203ENST00000460110 THRAP3Q9Y2W1 955 aaKnown RBP11.18□□□□□ -0.62
NUDCD3-203ENST00000460110 RTCBQ9Y3I0 505 aaKnown RBP11.18□□□□□ -0.62
NUDCD3-203ENST00000460110 NUCB2P80303 420 aa11.18□□□□□ -0.62
NUDCD3-203ENST00000460110 VPS53Q5VIR6 699 aa11.18□□□□□ -0.62
NUDCD3-203ENST00000460110 SEPT12Q8IYM1 358 aa11.18□□□□□ -0.62
NUDCD3-203ENST00000460110 CERKQ8TCT0 537 aa11.18□□□□□ -0.62
NUDCD3-203ENST00000460110 TAF6LQ9Y6J9 622 aa11.18□□□□□ -0.62
NUDCD3-203ENST00000460110 TRIM37O94972 964 aa11.17□□□□□ -0.62
NUDCD3-203ENST00000460110 CHAF1AQ13111 956 aaPredicted RBP11.17□□□□□ -0.62
NUDCD3-203ENST00000460110 SCARF1Q14162 830 aa11.17□□□□□ -0.62
NUDCD3-203ENST00000460110 UBN2Q6ZU65 1347 aa11.17□□□□□ -0.62
NUDCD3-203ENST00000460110 MCMDC2Q4G0Z9 681 aa11.17□□□□□ -0.62
NUDCD3-203ENST00000460110 SLC9C2Q5TAH2 1124 aa11.17□□□□□ -0.62
NUDCD3-203ENST00000460110 TTLL5Q6EMB2 1281 aa11.17□□□□□ -0.62
NUDCD3-203ENST00000460110 INTS5Q6P9B9 1019 aaKnown RBP11.17□□□□□ -0.62
NUDCD3-203ENST00000460110 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.17□□□□□ -0.62
NUDCD3-203ENST00000460110 DDX11L8A8MPP1 907 aa11.17□□□□□ -0.62
NUDCD3-203ENST00000460110 PHKA1P46020 1223 aa11.17□□□□□ -0.62
NUDCD3-203ENST00000460110 EIF5P55010 431 aaKnown RBP11.17□□□□□ -0.62
NUDCD3-203ENST00000460110 CCDC152Q4G0S7 254 aa11.17□□□□□ -0.62
NUDCD3-203ENST00000460110 RRP12Q5JTH9 1297 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms