RNA–Protein interactions for RNA: ENST00000459963.5

NCSTN-209, Transcript of nicastrin, human

TSL 5

Gene NCSTN, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCSTN-209	ENST00000459963	FAM122A	Q96E09	287 aa		11.33	□□□□□ -0.6
NCSTN-209	ENST00000459963	EYA1	Q99502	592 aa		11.33	□□□□□ -0.6
NCSTN-209	ENST00000459963	TRIM17	Q9Y577	477 aa		11.33	□□□□□ -0.6
NCSTN-209	ENST00000459963	LAMA3	Q16787	3333 aa		11.33	□□□□□ -0.6
NCSTN-209	ENST00000459963	TRPM4	Q8TD43	1214 aa		11.32	□□□□□ -0.6
NCSTN-209	ENST00000459963	SETDB2	Q96T68	719 aa		11.32	□□□□□ -0.6
NCSTN-209	ENST00000459963	RAPGEFL1	Q9UHV5	662 aa		11.32	□□□□□ -0.6
NCSTN-209	ENST00000459963		A0A087WZG4	1122 aa		11.31	□□□□□ -0.6
NCSTN-209	ENST00000459963	GMPS	P49915	693 aa	Predicted RBP	11.31	□□□□□ -0.6
NCSTN-209	ENST00000459963	MKRN3	Q13064	507 aa	Known RBP	11.31	□□□□□ -0.6
NCSTN-209	ENST00000459963	OTOP1	Q7RTM1	612 aa		11.31	□□□□□ -0.6
NCSTN-209	ENST00000459963	NIM1K	Q8IY84	436 aa		11.31	□□□□□ -0.6
NCSTN-209	ENST00000459963	DEFB123	Q8N688	67 aa		11.31	□□□□□ -0.6
NCSTN-209	ENST00000459963	GGNBP2	Q9H3C7	697 aa		11.31	□□□□□ -0.6
NCSTN-209	ENST00000459963	ANKRD26	Q9UPS8	1709 aa		11.31	□□□□□ -0.6
NCSTN-209	ENST00000459963	WASHC2A	Q641Q2	1341 aa		11.31	□□□□□ -0.6
NCSTN-209	ENST00000459963	CDHR2	Q9BYE9	1310 aa		11.31	□□□□□ -0.6
NCSTN-209	ENST00000459963	KIAA0100	Q14667	2235 aa	Known RBP	11.31	□□□□□ -0.6
NCSTN-209	ENST00000459963	KLRG2	A4D1S0	409 aa	Predicted RBP	11.3	□□□□□ -0.6
NCSTN-209	ENST00000459963	CANX	P27824	592 aa	Known RBP	11.3	□□□□□ -0.6
NCSTN-209	ENST00000459963	EIF5	P55010	431 aa	Known RBP	11.3	□□□□□ -0.6
NCSTN-209	ENST00000459963	GPR153	Q6NV75	609 aa		11.3	□□□□□ -0.6
NCSTN-209	ENST00000459963	KRT26	Q7Z3Y9	468 aa		11.3	□□□□□ -0.6
NCSTN-209	ENST00000459963	NPC1L1	Q9UHC9	1359 aa		11.29	□□□□□ -0.6
NCSTN-209	ENST00000459963	ST20-MTHFS	A0A0A6YYL1	179 aa		11.29	□□□□□ -0.6
NCSTN-209	ENST00000459963	FYB1	O15117	783 aa		11.29	□□□□□ -0.6
NCSTN-209	ENST00000459963	ALDH1B1	P30837	517 aa		11.29	□□□□□ -0.6
NCSTN-209	ENST00000459963	MTHFS	P49914	203 aa		11.29	□□□□□ -0.6
NCSTN-209	ENST00000459963	DPF3	Q92784	378 aa		11.29	□□□□□ -0.6
NCSTN-209	ENST00000459963	CFHR5	Q9BXR6	569 aa		11.29	□□□□□ -0.6
NCSTN-209	ENST00000459963	PTPN22	Q9Y2R2	807 aa		11.29	□□□□□ -0.6
NCSTN-209	ENST00000459963	SCN7A	Q01118	1682 aa		11.29	□□□□□ -0.6
NCSTN-209	ENST00000459963	CEP290	O15078	2479 aa		11.29	□□□□□ -0.6
NCSTN-209	ENST00000459963	TM4SF4	P48230	202 aa		11.28	□□□□□ -0.6
NCSTN-209	ENST00000459963	CXCL9	Q07325	125 aa		11.28	□□□□□ -0.6
NCSTN-209	ENST00000459963	CC2D2B	Q6DHV5	1058 aa		11.28	□□□□□ -0.6
NCSTN-209	ENST00000459963	R3HDML	Q9H3Y0	253 aa		11.28	□□□□□ -0.6
NCSTN-209	ENST00000459963	EMILIN1	Q9Y6C2	1016 aa		11.28	□□□□□ -0.6
NCSTN-209	ENST00000459963	MRC1	P22897	1456 aa		11.27	□□□□□ -0.6
NCSTN-209	ENST00000459963	ADM5	C9JUS6	153 aa		11.27	□□□□□ -0.61
NCSTN-209	ENST00000459963		Q7L0L9	218 aa		11.27	□□□□□ -0.61
NCSTN-209	ENST00000459963	BCL2L13	Q9BXK5	485 aa		11.27	□□□□□ -0.61
NCSTN-209	ENST00000459963	IRX5	P78411	483 aa	Predicted RBP	11.26	□□□□□ -0.61
NCSTN-209	ENST00000459963	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.26	□□□□□ -0.61
NCSTN-209	ENST00000459963	ZNF333	Q96JL9	665 aa		11.26	□□□□□ -0.61
NCSTN-209	ENST00000459963	OCEL1	Q9H607	264 aa		11.26	□□□□□ -0.61
NCSTN-209	ENST00000459963	MTMR10	Q9NXD2	777 aa		11.26	□□□□□ -0.61
NCSTN-209	ENST00000459963	CNOT7	Q9UIV1	285 aa	Known RBP	11.26	□□□□□ -0.61
NCSTN-209	ENST00000459963	TBC1D2B	Q9UPU7	963 aa		11.26	□□□□□ -0.61
NCSTN-209	ENST00000459963	ROCK2	O75116	1388 aa	Known RBP	11.26	□□□□□ -0.61
NCSTN-209	ENST00000459963	LAMB4	A4D0S4	1761 aa		11.26	□□□□□ -0.61
NCSTN-209	ENST00000459963	SHTN1	A0MZ66	631 aa		11.25	□□□□□ -0.61
NCSTN-209	ENST00000459963		H7C1D1	291 aa		11.25	□□□□□ -0.61
NCSTN-209	ENST00000459963	PPIP5K2	O43314	1243 aa		11.25	□□□□□ -0.61
NCSTN-209	ENST00000459963	SLC4A8	Q2Y0W8	1093 aa		11.25	□□□□□ -0.61
NCSTN-209	ENST00000459963	GRIPAP1	Q4V328	841 aa		11.25	□□□□□ -0.61
NCSTN-209	ENST00000459963	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.25	□□□□□ -0.61
NCSTN-209	ENST00000459963	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.25	□□□□□ -0.61
NCSTN-209	ENST00000459963	SNX27	Q96L92	541 aa		11.25	□□□□□ -0.61
NCSTN-209	ENST00000459963	PUS7	Q96PZ0	661 aa	Known RBP	11.25	□□□□□ -0.61
NCSTN-209	ENST00000459963	ZNRF3	Q9ULT6	936 aa		11.25	□□□□□ -0.61
NCSTN-209	ENST00000459963	PPM1G	O15355	546 aa	Predicted RBP	11.24	□□□□□ -0.61
NCSTN-209	ENST00000459963	DCPS	Q96C86	337 aa	Known RBP	11.24	□□□□□ -0.61
NCSTN-209	ENST00000459963	RAB3GAP2	Q9H2M9	1393 aa		11.24	□□□□□ -0.61
NCSTN-209	ENST00000459963	AOC3	Q16853	763 aa		11.23	□□□□□ -0.61
NCSTN-209	ENST00000459963	C1orf141	Q5JVX7	400 aa		11.23	□□□□□ -0.61
NCSTN-209	ENST00000459963	MICALL2	Q8IY33	904 aa		11.23	□□□□□ -0.61
NCSTN-209	ENST00000459963	VSIG10	Q8N0Z9	540 aa		11.23	□□□□□ -0.61
NCSTN-209	ENST00000459963	WTIP	A6NIX2	430 aa	Predicted RBP	11.22	□□□□□ -0.61
NCSTN-209	ENST00000459963	RIOK3	O14730	519 aa	Known RBP	11.22	□□□□□ -0.61
NCSTN-209	ENST00000459963	CAMTA2	O94983	1202 aa		11.22	□□□□□ -0.61
NCSTN-209	ENST00000459963	FKBP1B	P68106	108 aa		11.22	□□□□□ -0.61
NCSTN-209	ENST00000459963	SREBF2	Q12772	1141 aa		11.22	□□□□□ -0.61
NCSTN-209	ENST00000459963	SLC39A6	Q13433	755 aa		11.22	□□□□□ -0.61
NCSTN-209	ENST00000459963	AMOT	Q4VCS5	1084 aa		11.22	□□□□□ -0.61
NCSTN-209	ENST00000459963	SAMD7	Q7Z3H4	446 aa		11.22	□□□□□ -0.61
NCSTN-209	ENST00000459963	VPS33B	Q9H267	617 aa		11.22	□□□□□ -0.61
NCSTN-209	ENST00000459963	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.22	□□□□□ -0.61
NCSTN-209	ENST00000459963	ZBTB7B	O15156	539 aa	Predicted RBP	11.21	□□□□□ -0.61
NCSTN-209	ENST00000459963	STARD3NL	O95772	234 aa		11.21	□□□□□ -0.61
NCSTN-209	ENST00000459963	TNIP1	Q15025	636 aa		11.21	□□□□□ -0.61
NCSTN-209	ENST00000459963	NBPF11	Q86T75	865 aa		11.21	□□□□□ -0.61
NCSTN-209	ENST00000459963	CDCA5	Q96FF9	252 aa		11.21	□□□□□ -0.61
NCSTN-209	ENST00000459963	ERO1A	Q96HE7	468 aa		11.21	□□□□□ -0.61
NCSTN-209	ENST00000459963	NR2E3	Q9Y5X4	410 aa		11.21	□□□□□ -0.61
NCSTN-209	ENST00000459963	MUC3A	Q02505	3323 aa		11.21	□□□□□ -0.62
NCSTN-209	ENST00000459963	ZNF609	O15014	1411 aa		11.2	□□□□□ -0.62
NCSTN-209	ENST00000459963	RAD17	O75943	681 aa		11.2	□□□□□ -0.62
NCSTN-209	ENST00000459963	TPTE2	Q6XPS3	522 aa		11.2	□□□□□ -0.62
NCSTN-209	ENST00000459963	SULF1	Q8IWU6	871 aa		11.2	□□□□□ -0.62
NCSTN-209	ENST00000459963	EFCC1	Q9HA90	598 aa		11.2	□□□□□ -0.62
NCSTN-209	ENST00000459963	ALDH1A1	P00352	501 aa		11.19	□□□□□ -0.62
NCSTN-209	ENST00000459963	EGFR	P00533	1210 aa		11.19	□□□□□ -0.62
NCSTN-209	ENST00000459963	IL6ST	P40189	918 aa	Predicted RBP	11.19	□□□□□ -0.62
NCSTN-209	ENST00000459963	SLC9C1	Q4G0N8	1177 aa		11.19	□□□□□ -0.62
NCSTN-209	ENST00000459963	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.19	□□□□□ -0.62
NCSTN-209	ENST00000459963	CD99L2	Q8TCZ2	262 aa		11.19	□□□□□ -0.62
NCSTN-209	ENST00000459963	HTATIP2	Q9BUP3	242 aa		11.19	□□□□□ -0.62
NCSTN-209	ENST00000459963	SLC52A2	Q9HAB3	445 aa		11.19	□□□□□ -0.62
NCSTN-209	ENST00000459963	TAOK2	Q9UL54	1235 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms