RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 PCBP4P57723 403 aaKnown RBP11.11□□□□□ -0.63
CKAP2-204ENST00000459902 EHHADHQ08426 723 aa11.11□□□□□ -0.63
CKAP2-204ENST00000459902 PDE3BQ13370 1112 aa11.11□□□□□ -0.63
CKAP2-204ENST00000459902 TMC7Q7Z402 723 aa11.11□□□□□ -0.63
CKAP2-204ENST00000459902 ZNF438Q7Z4V0 828 aa11.11□□□□□ -0.63
CKAP2-204ENST00000459902 ELP3Q9H9T3 547 aa11.11□□□□□ -0.63
CKAP2-204ENST00000459902 TMEM63CQ9P1W3 806 aa11.11□□□□□ -0.63
CKAP2-204ENST00000459902 ADAMTS2O95450 1211 aa11.1□□□□□ -0.63
CKAP2-204ENST00000459902 RARAP10276 462 aa11.1□□□□□ -0.63
CKAP2-204ENST00000459902 ARAFP10398 606 aa11.1□□□□□ -0.63
CKAP2-204ENST00000459902 NEUROD1Q13562 356 aa11.1□□□□□ -0.63
CKAP2-204ENST00000459902 ASB16Q96NS5 453 aa11.09□□□□□ -0.63
CKAP2-204ENST00000459902 AVENQ9NQS1 362 aaPredicted RBP11.09□□□□□ -0.63
CKAP2-204ENST00000459902 GPR182O15218 404 aa11.08□□□□□ -0.64
CKAP2-204ENST00000459902 MMP20O60882 483 aa11.08□□□□□ -0.64
CKAP2-204ENST00000459902 MAP3K6O95382 1288 aa11.08□□□□□ -0.64
CKAP2-204ENST00000459902 SLURP2P0DP57 97 aa11.08□□□□□ -0.64
CKAP2-204ENST00000459902 MFAP1P55081 439 aaKnown RBP11.08□□□□□ -0.64
CKAP2-204ENST00000459902 DNAJC14Q6Y2X3 702 aaPredicted RBP11.08□□□□□ -0.64
CKAP2-204ENST00000459902 ZSCAN29Q8IWY8 852 aaPredicted RBP11.08□□□□□ -0.64
CKAP2-204ENST00000459902 ACDQ96AP0 544 aa11.08□□□□□ -0.64
CKAP2-204ENST00000459902 DMRTB1Q96MA1 342 aa11.08□□□□□ -0.64
CKAP2-204ENST00000459902 NEURL1BA8MQ27 555 aa11.07□□□□□ -0.64
CKAP2-204ENST00000459902 SIN3BO75182 1162 aa11.07□□□□□ -0.64
CKAP2-204ENST00000459902 OXCT2Q9BYC2 517 aaPredicted RBP11.07□□□□□ -0.64
CKAP2-204ENST00000459902 NIF3L1Q9GZT8 377 aa11.07□□□□□ -0.64
CKAP2-204ENST00000459902 ABI2Q9NYB9 513 aaPredicted RBP11.07□□□□□ -0.64
CKAP2-204ENST00000459902 GGA1Q9UJY5 639 aa11.07□□□□□ -0.64
CKAP2-204ENST00000459902 TNFRSF21O75509 655 aa11.06□□□□□ -0.64
CKAP2-204ENST00000459902 ADH6P28332 368 aa11.06□□□□□ -0.64
CKAP2-204ENST00000459902 TTC39BQ5VTQ0 682 aaPredicted RBP11.06□□□□□ -0.64
CKAP2-204ENST00000459902 TLR7Q9NYK1 1049 aaKnown RBP11.06□□□□□ -0.64
CKAP2-204ENST00000459902 PODXL2Q9NZ53 605 aa11.06□□□□□ -0.64
CKAP2-204ENST00000459902 CNTN3Q9P232 1028 aa11.06□□□□□ -0.64
CKAP2-204ENST00000459902 DSC3Q14574 896 aa11.05□□□□□ -0.64
CKAP2-204ENST00000459902 DHX32Q7L7V1 743 aaKnown RBP11.05□□□□□ -0.64
CKAP2-204ENST00000459902 FCHSD1Q86WN1 690 aa11.05□□□□□ -0.64
CKAP2-204ENST00000459902 ALKBH8Q96BT7 664 aaKnown RBP11.05□□□□□ -0.64
CKAP2-204ENST00000459902 IGFLR1Q9H665 355 aa11.05□□□□□ -0.64
CKAP2-204ENST00000459902 FOXD3Q9UJU5 478 aaPredicted RBP11.05□□□□□ -0.64
CKAP2-204ENST00000459902 ANKRD33BA6NCL7 494 aa11.04□□□□□ -0.64
CKAP2-204ENST00000459902 TREHO43280 583 aa11.04□□□□□ -0.64
CKAP2-204ENST00000459902 C1orf229Q6ZS94 237 aaPredicted RBP11.04□□□□□ -0.64
CKAP2-204ENST00000459902 GOLGA6L1Q8N7Z2 621 aa11.04□□□□□ -0.64
CKAP2-204ENST00000459902 C1orf127Q8N9H9 656 aa11.04□□□□□ -0.64
CKAP2-204ENST00000459902 OR13H1Q8NG92 308 aa11.04□□□□□ -0.64
CKAP2-204ENST00000459902 GDF2Q9UK05 429 aaPredicted RBP11.04□□□□□ -0.64
CKAP2-204ENST00000459902 PLCB3Q01970 1234 aa11.03□□□□□ -0.64
CKAP2-204ENST00000459902 TNFRSF25Q93038 417 aa11.03□□□□□ -0.64
CKAP2-204ENST00000459902 MDFIQ99750 246 aa11.03□□□□□ -0.64
CKAP2-204ENST00000459902 UBE2OQ9C0C9 1292 aaKnown RBP11.03□□□□□ -0.64
CKAP2-204ENST00000459902 ZBTB42B2RXF5 422 aa11.02□□□□□ -0.65
CKAP2-204ENST00000459902 WIPF1O43516 503 aa11.02□□□□□ -0.65
CKAP2-204ENST00000459902 CYP2E1P05181 493 aaPredicted RBP11.02□□□□□ -0.65
CKAP2-204ENST00000459902 PSAPP07602 524 aa11.02□□□□□ -0.65
CKAP2-204ENST00000459902 TBC1D8BQ0IIM8 1120 aa11.02□□□□□ -0.65
CKAP2-204ENST00000459902 ORC1Q13415 861 aa11.02□□□□□ -0.65
CKAP2-204ENST00000459902 CHRDQ9H2X0 955 aa11.02□□□□□ -0.65
CKAP2-204ENST00000459902 ADARB2-AS1A8MUL3 147 aa11.01□□□□□ -0.65
CKAP2-204ENST00000459902 PHACTR2O75167 634 aa11.01□□□□□ -0.65
CKAP2-204ENST00000459902 LYPD4Q6UWN0 246 aa11.01□□□□□ -0.65
CKAP2-204ENST00000459902 SLCO4C1Q6ZQN7 724 aa11.01□□□□□ -0.65
CKAP2-204ENST00000459902 TRPM4Q8TD43 1214 aa11.01□□□□□ -0.65
CKAP2-204ENST00000459902 SNX29Q8TEQ0 813 aa11.01□□□□□ -0.65
CKAP2-204ENST00000459902 WHAMMQ8TF30 809 aa11.01□□□□□ -0.65
CKAP2-204ENST00000459902 ZFYVE28Q9HCC9 887 aa11.01□□□□□ -0.65
CKAP2-204ENST00000459902 DNAJB12Q9NXW2 375 aaKnown RBP11.01□□□□□ -0.65
CKAP2-204ENST00000459902 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.01□□□□□ -0.65
CKAP2-204ENST00000459902 CELA2BP08218 269 aaPredicted RBP11□□□□□ -0.65
CKAP2-204ENST00000459902 SOX18P35713 384 aa11□□□□□ -0.65
CKAP2-204ENST00000459902 PLAURQ03405 335 aa11□□□□□ -0.65
CKAP2-204ENST00000459902 NEFLP07196 543 aa10.99□□□□□ -0.65
CKAP2-204ENST00000459902 BCRP11274 1271 aa10.99□□□□□ -0.65
CKAP2-204ENST00000459902 EPXP11678 715 aa10.99□□□□□ -0.65
CKAP2-204ENST00000459902 HOXD8P13378 290 aaPredicted RBP10.99□□□□□ -0.65
CKAP2-204ENST00000459902 CES1P23141 567 aa10.99□□□□□ -0.65
CKAP2-204ENST00000459902 NRLP54845 237 aa10.99□□□□□ -0.65
CKAP2-204ENST00000459902 MLLT1Q03111 559 aaPredicted RBP10.99□□□□□ -0.65
CKAP2-204ENST00000459902 COL13A1Q5TAT6 717 aaPredicted RBP10.99□□□□□ -0.65
CKAP2-204ENST00000459902 NPAS4Q8IUM7 802 aa10.99□□□□□ -0.65
CKAP2-204ENST00000459902 GALNT6Q8NCL4 622 aa10.99□□□□□ -0.65
CKAP2-204ENST00000459902 KANSL3Q9P2N6 904 aa10.99□□□□□ -0.65
CKAP2-204ENST00000459902 ELOA3CA0A087WX78 387 aaPredicted RBP10.98□□□□□ -0.65
CKAP2-204ENST00000459902 ELOA3DA6NLF2 546 aaPredicted RBP10.98□□□□□ -0.65
CKAP2-204ENST00000459902 EREGO14944 169 aa10.98□□□□□ -0.65
CKAP2-204ENST00000459902 OIP5O43482 229 aa10.98□□□□□ -0.65
CKAP2-204ENST00000459902 ERCC3P19447 782 aa10.98□□□□□ -0.65
CKAP2-204ENST00000459902 ADH7P40394 386 aa10.98□□□□□ -0.65
CKAP2-204ENST00000459902 GPLD1P80108 840 aa10.98□□□□□ -0.65
CKAP2-204ENST00000459902 FMR1Q06787 632 aaKnown RBP eCLIP10.98□□□□□ -0.65
CKAP2-204ENST00000459902 ELOA3BQ3SY89 546 aa10.98□□□□□ -0.65
CKAP2-204ENST00000459902 USPL1Q5W0Q7 1092 aa10.98□□□□□ -0.65
CKAP2-204ENST00000459902 ELOA3Q8NG57 546 aa10.98□□□□□ -0.65
CKAP2-204ENST00000459902 EDARADDQ8WWZ3 215 aa10.98□□□□□ -0.65
CKAP2-204ENST00000459902 PMEPA1Q969W9 287 aa10.98□□□□□ -0.65
CKAP2-204ENST00000459902 CCDC9Q9Y3X0 531 aaKnown RBP10.98□□□□□ -0.65
CKAP2-204ENST00000459902 PHF20L1A8MW92 1017 aa10.97□□□□□ -0.65
CKAP2-204ENST00000459902 EIF1AYO14602 144 aaKnown RBP10.97□□□□□ -0.65
CKAP2-204ENST00000459902 ZNF385CQ66K41 422 aaPredicted RBP10.97□□□□□ -0.65
CKAP2-204ENST00000459902 HFE2Q6ZVN8 426 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms