RNA–Protein interactions for RNA: ENST00000459741.5

TRAPPC10-204, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 5,826 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-204ENST00000459741 CHMLP26374 656 aa13.09□□□□□ -0.31
TRAPPC10-204ENST00000459741 METTL24Q5JXM2 366 aa13.09□□□□□ -0.31
TRAPPC10-204ENST00000459741 GIGYF2Q6Y7W6 1299 aaKnown RBP13.09□□□□□ -0.31
TRAPPC10-204ENST00000459741 CAPN2P17655 700 aa13.09□□□□□ -0.31
TRAPPC10-204ENST00000459741 SCLT1Q96NL6 688 aa13.09□□□□□ -0.31
TRAPPC10-204ENST00000459741 LMBRD1Q9NUN5 540 aa13.09□□□□□ -0.31
TRAPPC10-204ENST00000459741 RMND1Q9NWS8 449 aa13.09□□□□□ -0.31
TRAPPC10-204ENST00000459741 LRP2BPQ9P2M1 347 aa13.09□□□□□ -0.31
TRAPPC10-204ENST00000459741 TEX14Q8IWB6 1497 aa13.09□□□□□ -0.31
TRAPPC10-204ENST00000459741 C16orf71Q8IYS4 520 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC10-204ENST00000459741 CTCFLQ8NI51 663 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC10-204ENST00000459741 GPATCH11Q8N954 259 aa13.09□□□□□ -0.31
TRAPPC10-204ENST00000459741 RSPH14Q9UHP6 348 aa13.09□□□□□ -0.31
TRAPPC10-204ENST00000459741 RTL1A6NKG5 1358 aa13.09□□□□□ -0.31
TRAPPC10-204ENST00000459741 ZBTB7BO15156 539 aaPredicted RBP13.08□□□□□ -0.31
TRAPPC10-204ENST00000459741 POLR3DP05423 398 aaPredicted RBP13.08□□□□□ -0.31
TRAPPC10-204ENST00000459741 RASSF4Q9H2L5 321 aa13.08□□□□□ -0.31
TRAPPC10-204ENST00000459741 SPINK5Q9NQ38 1064 aaPredicted RBP13.08□□□□□ -0.31
TRAPPC10-204ENST00000459741 CTAGE9A4FU28 777 aa13.08□□□□□ -0.32
TRAPPC10-204ENST00000459741 RIOK3O14730 519 aaKnown RBP13.08□□□□□ -0.32
TRAPPC10-204ENST00000459741 SPECC1LQ69YQ0 1117 aa13.08□□□□□ -0.32
TRAPPC10-204ENST00000459741 NBPF11Q86T75 865 aa13.08□□□□□ -0.32
TRAPPC10-204ENST00000459741 RAB34Q9BZG1 259 aa13.08□□□□□ -0.32
TRAPPC10-204ENST00000459741 ZSWIM4Q9H7M6 989 aa13.08□□□□□ -0.32
TRAPPC10-204ENST00000459741 IFIT3O14879 490 aaKnown RBP13.08□□□□□ -0.32
TRAPPC10-204ENST00000459741 N4BP3O15049 544 aa13.08□□□□□ -0.32
TRAPPC10-204ENST00000459741 CYLC1P35663 651 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC10-204ENST00000459741 MCM6Q14566 821 aa13.08□□□□□ -0.32
TRAPPC10-204ENST00000459741 WAPLQ7Z5K2 1190 aa13.08□□□□□ -0.32
TRAPPC10-204ENST00000459741 SHANK2Q9UPX8 1470 aa13.08□□□□□ -0.32
TRAPPC10-204ENST00000459741 ZFYVE9O95405 1425 aa13.08□□□□□ -0.32
TRAPPC10-204ENST00000459741 FAM83GA6ND36 823 aa13.08□□□□□ -0.32
TRAPPC10-204ENST00000459741 ALDH1L1O75891 902 aa13.08□□□□□ -0.32
TRAPPC10-204ENST00000459741 METAP2P50579 478 aaKnown RBP eCLIP13.08□□□□□ -0.32
TRAPPC10-204ENST00000459741 MAP3K12Q12852 859 aa13.08□□□□□ -0.32
TRAPPC10-204ENST00000459741 C8orf58Q8NAV2 365 aa13.08□□□□□ -0.32
TRAPPC10-204ENST00000459741 MTIF2P46199 727 aaKnown RBP13.07□□□□□ -0.32
TRAPPC10-204ENST00000459741 FSD2A1L4K1 749 aa13.07□□□□□ -0.32
TRAPPC10-204ENST00000459741 TUBB2AQ13885 445 aa13.07□□□□□ -0.32
TRAPPC10-204ENST00000459741 TTF1Q15361 905 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC10-204ENST00000459741 CCDC178Q5BJE1 867 aa13.07□□□□□ -0.32
TRAPPC10-204ENST00000459741 TUBB2BQ9BVA1 445 aa13.07□□□□□ -0.32
TRAPPC10-204ENST00000459741 DNAI2Q9GZS0 605 aa13.07□□□□□ -0.32
TRAPPC10-204ENST00000459741 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.07□□□□□ -0.32
TRAPPC10-204ENST00000459741 CETN2P41208 172 aa13.07□□□□□ -0.32
TRAPPC10-204ENST00000459741 AMPD3Q01432 767 aa13.07□□□□□ -0.32
TRAPPC10-204ENST00000459741 TTC31Q49AM3 519 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC10-204ENST00000459741 IQCA1Q86XH1 822 aa13.07□□□□□ -0.32
TRAPPC10-204ENST00000459741 JADE2Q9NQC1 790 aa13.07□□□□□ -0.32
TRAPPC10-204ENST00000459741 AOX1Q06278 1338 aa13.07□□□□□ -0.32
TRAPPC10-204ENST00000459741 TTLL12Q14166 644 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC10-204ENST00000459741 TNIP1Q15025 636 aa13.07□□□□□ -0.32
TRAPPC10-204ENST00000459741 SYT10Q6XYQ8 523 aa13.07□□□□□ -0.32
TRAPPC10-204ENST00000459741 ZNF287Q9HBT7 754 aa13.07□□□□□ -0.32
TRAPPC10-204ENST00000459741 MAP3K2Q9Y2U5 619 aa13.07□□□□□ -0.32
TRAPPC10-204ENST00000459741 SOS1Q07889 1333 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC10-204ENST00000459741 ZFYP08048 801 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC10-204ENST00000459741 HLTFQ14527 1009 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRAPPC10-204ENST00000459741 TAOK3Q9H2K8 898 aa13.06□□□□□ -0.32
TRAPPC10-204ENST00000459741 PI4KAP2A4QPH2 592 aa13.06□□□□□ -0.32
TRAPPC10-204ENST00000459741 ADGRL1O94910 1474 aa13.06□□□□□ -0.32
TRAPPC10-204ENST00000459741 TDRD12Q587J7 1177 aaKnown RBP13.06□□□□□ -0.32
TRAPPC10-204ENST00000459741 PI4KAP1Q8N8J0 262 aa13.06□□□□□ -0.32
TRAPPC10-204ENST00000459741 EBAG9O00559 213 aa13.06□□□□□ -0.32
TRAPPC10-204ENST00000459741 SPTLC2O15270 562 aa13.06□□□□□ -0.32
TRAPPC10-204ENST00000459741 SSR1P43307 286 aaKnown RBP13.06□□□□□ -0.32
TRAPPC10-204ENST00000459741 RUFY3Q7L099 469 aa13.06□□□□□ -0.32
TRAPPC10-204ENST00000459741 HDXQ7Z353 690 aa13.06□□□□□ -0.32
TRAPPC10-204ENST00000459741 CCDC91Q7Z6B0 441 aa13.06□□□□□ -0.32
TRAPPC10-204ENST00000459741 RAPGEF6Q8TEU7 1601 aa13.06□□□□□ -0.32
TRAPPC10-204ENST00000459741 A0A087WZG4 1122 aa13.06□□□□□ -0.32
TRAPPC10-204ENST00000459741 HSPA4P34932 840 aa13.06□□□□□ -0.32
TRAPPC10-204ENST00000459741 CRACR2BQ8N4Y2 399 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC10-204ENST00000459741 TMEM87AQ8NBN3 555 aa13.06□□□□□ -0.32
TRAPPC10-204ENST00000459741 SPECC1Q5M775 1068 aa13.05□□□□□ -0.32
TRAPPC10-204ENST00000459741 ZPR1O75312 459 aa13.05□□□□□ -0.32
TRAPPC10-204ENST00000459741 MYCNP04198 464 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC10-204ENST00000459741 NF2P35240 595 aa13.05□□□□□ -0.32
TRAPPC10-204ENST00000459741 MAATS1Q7Z4T9 603 aa13.05□□□□□ -0.32
TRAPPC10-204ENST00000459741 STARD3NLO95772 234 aa13.05□□□□□ -0.32
TRAPPC10-204ENST00000459741 LIG1P18858 919 aa13.05□□□□□ -0.32
TRAPPC10-204ENST00000459741 IFI16Q16666 785 aaKnown RBP13.05□□□□□ -0.32
TRAPPC10-204ENST00000459741 MCMDC2Q4G0Z9 681 aa13.05□□□□□ -0.32
TRAPPC10-204ENST00000459741 BRAPQ7Z569 592 aa13.05□□□□□ -0.32
TRAPPC10-204ENST00000459741 CCDC85AQ96PX6 553 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC10-204ENST00000459741 PZPP20742 1482 aa13.05□□□□□ -0.32
TRAPPC10-204ENST00000459741 CCDC194A0A1B0GVG4 234 aa13.05□□□□□ -0.32
TRAPPC10-204ENST00000459741 TMEM67Q5HYA8 995 aa13.05□□□□□ -0.32
TRAPPC10-204ENST00000459741 PPP4R3AQ6IN85 833 aa13.05□□□□□ -0.32
TRAPPC10-204ENST00000459741 Q6ZUG5 572 aa13.05□□□□□ -0.32
TRAPPC10-204ENST00000459741 IRX3P78415 501 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC10-204ENST00000459741 TMEM266Q2M3C6 531 aa13.05□□□□□ -0.32
TRAPPC10-204ENST00000459741 CATIPQ7Z7H3 387 aa13.05□□□□□ -0.32
TRAPPC10-204ENST00000459741 ZNF652Q9Y2D9 606 aa13.05□□□□□ -0.32
TRAPPC10-204ENST00000459741 KLF18A0A0U1RQI7 1052 aa13.04□□□□□ -0.32
TRAPPC10-204ENST00000459741 POTEJP0CG39 1038 aa13.04□□□□□ -0.32
TRAPPC10-204ENST00000459741 KRT83P78385 493 aa13.04□□□□□ -0.32
TRAPPC10-204ENST00000459741 CLSTN2Q9H4D0 955 aa13.04□□□□□ -0.32
TRAPPC10-204ENST00000459741 IMPACTQ9P2X3 320 aa13.04□□□□□ -0.32
TRAPPC10-204ENST00000459741 BICRAQ9NZM4 1560 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms