RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 POLA2Q14181 598 aa7.14□□□□□ -1.27
RNU1-88P-201ENST00000459274 CCDC158Q5M9N0 1113 aa7.14□□□□□ -1.27
RNU1-88P-201ENST00000459274 LDHAL6AQ6ZMR3 332 aa7.14□□□□□ -1.27
RNU1-88P-201ENST00000459274 DDX46Q7L014 1031 aaKnown RBP7.14□□□□□ -1.27
RNU1-88P-201ENST00000459274 LRP10Q7Z4F1 713 aa7.14□□□□□ -1.27
RNU1-88P-201ENST00000459274 CNBD1Q8NA66 436 aa7.14□□□□□ -1.27
RNU1-88P-201ENST00000459274 RPGRQ92834 1020 aaKnown RBP7.14□□□□□ -1.27
RNU1-88P-201ENST00000459274 NEUROD6Q96NK8 337 aa7.14□□□□□ -1.27
RNU1-88P-201ENST00000459274 PLA2G12BQ9BX93 195 aa7.14□□□□□ -1.27
RNU1-88P-201ENST00000459274 CARMIL3Q8ND23 1372 aa7.13□□□□□ -1.27
RNU1-88P-201ENST00000459274 TTC41PQ6P2S7 1318 aa7.13□□□□□ -1.27
RNU1-88P-201ENST00000459274 HIP1O00291 1037 aa7.13□□□□□ -1.27
RNU1-88P-201ENST00000459274 CIAO1O76071 339 aa7.13□□□□□ -1.27
RNU1-88P-201ENST00000459274 ITGA6P23229 1130 aa7.13□□□□□ -1.27
RNU1-88P-201ENST00000459274 KCNJ4P48050 445 aa7.13□□□□□ -1.27
RNU1-88P-201ENST00000459274 CTSWP56202 376 aa7.13□□□□□ -1.27
RNU1-88P-201ENST00000459274 AACSQ86V21 672 aa7.13□□□□□ -1.27
RNU1-88P-201ENST00000459274 ANKRD18AQ8IVF6 992 aa7.13□□□□□ -1.27
RNU1-88P-201ENST00000459274 CNTROBQ8N137 903 aa7.13□□□□□ -1.27
RNU1-88P-201ENST00000459274 RUFY2Q8WXA3 655 aa7.13□□□□□ -1.27
RNU1-88P-201ENST00000459274 JARID2Q92833 1246 aaPredicted RBP7.13□□□□□ -1.27
RNU1-88P-201ENST00000459274 RILPL2Q969X0 211 aa7.13□□□□□ -1.27
RNU1-88P-201ENST00000459274 COPRSQ9NQ92 184 aa7.13□□□□□ -1.27
RNU1-88P-201ENST00000459274 NOP58Q9Y2X3 529 aaKnown RBP7.13□□□□□ -1.27
RNU1-88P-201ENST00000459274 RGPD3A6NKT7 1758 aaPredicted RBP7.13□□□□□ -1.27
RNU1-88P-201ENST00000459274 BCORQ6W2J9 1755 aa7.13□□□□□ -1.27
RNU1-88P-201ENST00000459274 RGPD4Q7Z3J3 1758 aa7.13□□□□□ -1.27
RNU1-88P-201ENST00000459274 RREB1Q92766 1687 aa7.12□□□□□ -1.27
RNU1-88P-201ENST00000459274 AOX1Q06278 1338 aa7.12□□□□□ -1.27
RNU1-88P-201ENST00000459274 MROH5Q6ZUA9 1318 aa7.12□□□□□ -1.27
RNU1-88P-201ENST00000459274 USP42Q9H9J4 1324 aaKnown RBP7.12□□□□□ -1.27
RNU1-88P-201ENST00000459274 EYA2O00167 538 aa7.12□□□□□ -1.27
RNU1-88P-201ENST00000459274 GLRX3O76003 335 aaKnown RBP7.12□□□□□ -1.27
RNU1-88P-201ENST00000459274 RABL6Q3YEC7 729 aaPredicted RBP7.12□□□□□ -1.27
RNU1-88P-201ENST00000459274 BMP2KLQ5H9B9 411 aa7.12□□□□□ -1.27
RNU1-88P-201ENST00000459274 METTL24Q5JXM2 366 aa7.12□□□□□ -1.27
RNU1-88P-201ENST00000459274 SUSD4Q5VX71 490 aa7.12□□□□□ -1.27
RNU1-88P-201ENST00000459274 KIAA1211Q6ZU35 1233 aa7.12□□□□□ -1.27
RNU1-88P-201ENST00000459274 VPS37DQ86XT2 251 aa7.12□□□□□ -1.27
RNU1-88P-201ENST00000459274 SIRT2Q8IXJ6 389 aa7.12□□□□□ -1.27
RNU1-88P-201ENST00000459274 RBM17Q96I25 401 aaKnown RBP7.12□□□□□ -1.27
RNU1-88P-201ENST00000459274 IL1RAPL2Q9NP60 686 aa7.12□□□□□ -1.27
RNU1-88P-201ENST00000459274 GNL3LQ9NVN8 582 aaKnown RBP7.12□□□□□ -1.27
RNU1-88P-201ENST00000459274 UBR3Q6ZT12 1888 aa7.12□□□□□ -1.27
RNU1-88P-201ENST00000459274 G3V3G9 751 aa7.11□□□□□ -1.27
RNU1-88P-201ENST00000459274 SMARCA5O60264 1052 aaPredicted RBP7.11□□□□□ -1.27
RNU1-88P-201ENST00000459274 CDC45O75419 566 aa7.11□□□□□ -1.27
RNU1-88P-201ENST00000459274 FRAT2O75474 233 aaPredicted RBP7.11□□□□□ -1.27
RNU1-88P-201ENST00000459274 REC8O95072 547 aa7.11□□□□□ -1.27
RNU1-88P-201ENST00000459274 IFIT1P09914 478 aaKnown RBP7.11□□□□□ -1.27
RNU1-88P-201ENST00000459274 SLC5A1P13866 664 aa7.11□□□□□ -1.27
RNU1-88P-201ENST00000459274 HCLS1P14317 486 aaPredicted RBP7.11□□□□□ -1.27
RNU1-88P-201ENST00000459274 MCCP23508 829 aa7.11□□□□□ -1.27
RNU1-88P-201ENST00000459274 PDE4AP27815 886 aa7.11□□□□□ -1.27
RNU1-88P-201ENST00000459274 PDE6BP35913 854 aa7.11□□□□□ -1.27
RNU1-88P-201ENST00000459274 FOXO4P98177 505 aa7.11□□□□□ -1.27
RNU1-88P-201ENST00000459274 EN1Q05925 392 aaPredicted RBP7.11□□□□□ -1.27
RNU1-88P-201ENST00000459274 CAVIN4Q5BKX8 364 aa7.11□□□□□ -1.27
RNU1-88P-201ENST00000459274 DCAF8Q5TAQ9 597 aa7.11□□□□□ -1.27
RNU1-88P-201ENST00000459274 TBC1D9BQ66K14 1250 aa7.11□□□□□ -1.27
RNU1-88P-201ENST00000459274 PTF1AQ7RTS3 328 aa7.11□□□□□ -1.27
RNU1-88P-201ENST00000459274 TTLL11Q8NHH1 800 aa7.11□□□□□ -1.27
RNU1-88P-201ENST00000459274 CCDC85AQ96PX6 553 aaPredicted RBP7.11□□□□□ -1.27
RNU1-88P-201ENST00000459274 ANKRD2Q9GZV1 360 aa7.11□□□□□ -1.27
RNU1-88P-201ENST00000459274 ECHDC1Q9NTX5 307 aa7.11□□□□□ -1.27
RNU1-88P-201ENST00000459274 RGS17Q9UGC6 210 aaPredicted RBP7.11□□□□□ -1.27
RNU1-88P-201ENST00000459274 SERPINB2P05120 415 aa7.1□□□□□ -1.27
RNU1-88P-201ENST00000459274 CSF1RP07333 972 aa7.1□□□□□ -1.27
RNU1-88P-201ENST00000459274 POLD1P28340 1107 aa7.1□□□□□ -1.27
RNU1-88P-201ENST00000459274 ALDH1B1P30837 517 aa7.1□□□□□ -1.27
RNU1-88P-201ENST00000459274 PDE1AP54750 535 aa7.1□□□□□ -1.27
RNU1-88P-201ENST00000459274 MFAP1P55081 439 aaKnown RBP7.1□□□□□ -1.27
RNU1-88P-201ENST00000459274 SLC15A2Q16348 729 aa7.1□□□□□ -1.27
RNU1-88P-201ENST00000459274 ERFEQ4G0M1 354 aa7.1□□□□□ -1.27
RNU1-88P-201ENST00000459274 TTC39AQ5SRH9 613 aa7.1□□□□□ -1.27
RNU1-88P-201ENST00000459274 TTC22Q5TAA0 569 aa7.1□□□□□ -1.27
RNU1-88P-201ENST00000459274 TMC4Q7Z404 712 aa7.1□□□□□ -1.27
RNU1-88P-201ENST00000459274 ILDR1Q86SU0 546 aaPredicted RBP7.1□□□□□ -1.27
RNU1-88P-201ENST00000459274 NUTM1Q86Y26 1132 aa7.1□□□□□ -1.27
RNU1-88P-201ENST00000459274 PLEKHM2Q8IWE5 1019 aa7.1□□□□□ -1.27
RNU1-88P-201ENST00000459274 SLC16A10Q8TF71 515 aa7.1□□□□□ -1.27
RNU1-88P-201ENST00000459274 DDRGK1Q96HY6 314 aa7.1□□□□□ -1.27
RNU1-88P-201ENST00000459274 GPR108Q9NPR9 543 aa7.1□□□□□ -1.27
RNU1-88P-201ENST00000459274 DIAPH3Q9NSV4 1193 aa7.1□□□□□ -1.27
RNU1-88P-201ENST00000459274 LRRC4BQ9NT99 713 aa7.1□□□□□ -1.27
RNU1-88P-201ENST00000459274 SRP68Q9UHB9 627 aaKnown RBP7.1□□□□□ -1.27
RNU1-88P-201ENST00000459274 PA2G4Q9UQ80 394 aaKnown RBP7.1□□□□□ -1.27
RNU1-88P-201ENST00000459274 SCN7AQ01118 1682 aa7.09□□□□□ -1.27
RNU1-88P-201ENST00000459274 NTSR2O95665 410 aa7.09□□□□□ -1.27
RNU1-88P-201ENST00000459274 UQCRFS1P1P0C7P4 283 aa7.09□□□□□ -1.27
RNU1-88P-201ENST00000459274 RPS8P62241 208 aaKnown RBP7.09□□□□□ -1.27
RNU1-88P-201ENST00000459274 PTPN12Q05209 780 aaKnown RBP7.09□□□□□ -1.27
RNU1-88P-201ENST00000459274 TFCP2Q12800 502 aa7.09□□□□□ -1.27
RNU1-88P-201ENST00000459274 TTF1Q15361 905 aaPredicted RBP7.09□□□□□ -1.27
RNU1-88P-201ENST00000459274 EZH2Q15910 746 aaKnown RBP7.09□□□□□ -1.27
RNU1-88P-201ENST00000459274 SLC10A5Q5PT55 438 aa7.09□□□□□ -1.27
RNU1-88P-201ENST00000459274 ZSCAN25Q6NSZ9 544 aa7.09□□□□□ -1.27
RNU1-88P-201ENST00000459274 EVI5LQ96CN4 794 aa7.09□□□□□ -1.27
RNU1-88P-201ENST00000459274 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.09□□□□□ -1.27
RNU1-88P-201ENST00000459274 OSBPL3Q9H4L5 887 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms