RNA–Protein interactions for RNA: ENST00000458294.5

PBRM1-218, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-218ENST00000458294 ECE1P42892 770 aa34.44■■■■□ 3.1
PBRM1-218ENST00000458294 FMR1Q06787 632 aaKnown RBP eCLIP34.44■■■■□ 3.18e-7■■■□□ 17.7
PBRM1-218ENST00000458294 NEUROD2Q15784 382 aa34.44■■■■□ 3.1
PBRM1-218ENST00000458294 KRT24Q2M2I5 525 aa34.43■■■■□ 3.1
PBRM1-218ENST00000458294 TMC4Q7Z404 712 aa34.43■■■■□ 3.1
PBRM1-218ENST00000458294 CCDC146Q8IYE0 955 aa34.43■■■■□ 3.1
PBRM1-218ENST00000458294 CST9Q5W186 159 aa34.42■■■■□ 3.1
PBRM1-218ENST00000458294 CIAPIN1Q6FI81 312 aa34.42■■■■□ 3.1
PBRM1-218ENST00000458294 CHPF2Q9P2E5 772 aa34.42■■■■□ 3.1
PBRM1-218ENST00000458294 TRAF5O00463 557 aa34.41■■■■□ 3.1
PBRM1-218ENST00000458294 HOXB7P09629 217 aa34.41■■■■□ 3.1
PBRM1-218ENST00000458294 HSPA8P11142 646 aaKnown RBP34.41■■■■□ 3.1
PBRM1-218ENST00000458294 GMPSP49915 693 aaPredicted RBP34.41■■■■□ 3.1
PBRM1-218ENST00000458294 RUNDC1Q96C34 613 aa34.41■■■■□ 3.1
PBRM1-218ENST00000458294 CAPNS2Q96L46 248 aa34.41■■■■□ 3.1
PBRM1-218ENST00000458294 TRIM35Q9UPQ4 493 aa34.41■■■■□ 3.1
PBRM1-218ENST00000458294 LRRC37AA6NMS7 1700 aa34.41■■■■□ 3.1
PBRM1-218ENST00000458294 TNIP1Q15025 636 aa34.4■■■■□ 3.1
PBRM1-218ENST00000458294 HDGFL1Q5TGJ6 251 aa34.4■■■■□ 3.1
PBRM1-218ENST00000458294 PLBD2Q8NHP8 589 aa34.4■■■■□ 3.1
PBRM1-218ENST00000458294 LAS1LQ9Y4W2 734 aaKnown RBP34.4■■■■□ 3.1
PBRM1-218ENST00000458294 TLL2Q9Y6L7 1015 aa34.4■■■■□ 3.1
PBRM1-218ENST00000458294 DDX60Q8IY21 1712 aaKnown RBP34.4■■■■□ 3.1
PBRM1-218ENST00000458294 PAXIP1Q6ZW49 1069 aaPredicted RBP34.39■■■■□ 3.1
PBRM1-218ENST00000458294 TAF1P21675 1872 aa34.39■■■■□ 3.1
PBRM1-218ENST00000458294 DUOX1Q9NRD9 1551 aa34.38■■■■□ 3.09
PBRM1-218ENST00000458294 WDR43Q15061 677 aaKnown RBP eCLIP34.37■■■■□ 3.09
PBRM1-218ENST00000458294 CYP4F22Q6NT55 531 aa34.37■■■■□ 3.09
PBRM1-218ENST00000458294 BCL2L13Q9BXK5 485 aa34.37■■■■□ 3.09
PBRM1-218ENST00000458294 DBF4Q9UBU7 674 aaPredicted RBP34.37■■■■□ 3.09
PBRM1-218ENST00000458294 PGAP2Q9UHJ9 254 aa34.37■■■■□ 3.09
PBRM1-218ENST00000458294 RAD17O75943 681 aa34.36■■■■□ 3.09
PBRM1-218ENST00000458294 ANKRD13DQ6ZTN6 518 aa34.36■■■■□ 3.09
PBRM1-218ENST00000458294 ZC3H15Q8WU90 426 aaKnown RBP34.35■■■■□ 3.09
PBRM1-218ENST00000458294 GPR101Q96P66 508 aaPredicted RBP34.35■■■■□ 3.09
PBRM1-218ENST00000458294 ISCA1Q9BUE6 129 aa34.35■■■■□ 3.09
PBRM1-218ENST00000458294 SF3B3Q15393 1217 aaKnown RBP34.33■■■■□ 3.09
PBRM1-218ENST00000458294 BEGAINQ9BUH8 593 aa34.33■■■■□ 3.09
PBRM1-218ENST00000458294 DDX10Q13206 875 aaKnown RBP34.32■■■■□ 3.08
PBRM1-218ENST00000458294 GRM1Q13255 1194 aa34.32■■■■□ 3.08
PBRM1-218ENST00000458294 YDJCA8MPS7 323 aa34.31■■■■□ 3.08
PBRM1-218ENST00000458294 CELF2O95319 508 aaKnown RBP34.31■■■■□ 3.08
PBRM1-218ENST00000458294 SAPCD2Q86UD0 394 aa34.31■■■■□ 3.08
PBRM1-218ENST00000458294 FAM89AQ96GI7 184 aa34.31■■■■□ 3.08
PBRM1-218ENST00000458294 CFAP44Q96MT7 982 aa34.31■■■■□ 3.08
PBRM1-218ENST00000458294 GLIS2Q9BZE0 524 aaPredicted RBP34.31■■■■□ 3.08
PBRM1-218ENST00000458294 HYPKQ9NX55 129 aa34.31■■■■□ 3.08
PBRM1-218ENST00000458294 MAP2K2P36507 400 aa34.3■■■■□ 3.08
PBRM1-218ENST00000458294 CNOT7Q9UIV1 285 aaKnown RBP34.3■■■■□ 3.08
PBRM1-218ENST00000458294 HIRAP54198 1017 aaPredicted RBP34.29■■■■□ 3.08
PBRM1-218ENST00000458294 ZNF428Q96B54 188 aa34.29■■■■□ 3.08
PBRM1-218ENST00000458294 HHIPL1Q96JK4 782 aa34.29■■■■□ 3.08
PBRM1-218ENST00000458294 ADAMTS8Q9UP79 889 aa34.29■■■■□ 3.08
PBRM1-218ENST00000458294 ATP5J2-PTCD1G3V325 749 aa34.28■■■■□ 3.08
PBRM1-218ENST00000458294 H7C1D1 291 aa34.28■■■■□ 3.08
PBRM1-218ENST00000458294 WASHC4Q2M389 1173 aa34.28■■■■□ 3.08
PBRM1-218ENST00000458294 CDC37L1Q7L3B6 337 aa34.28■■■■□ 3.08
PBRM1-218ENST00000458294 TRPM4Q8TD43 1214 aa34.28■■■■□ 3.08
PBRM1-218ENST00000458294 CELF1Q92879 486 aaKnown RBP34.28■■■■□ 3.08
PBRM1-218ENST00000458294 TRIM28Q13263 835 aaKnown RBP34.27■■■■□ 3.08
PBRM1-218ENST00000458294 NSFL1CQ9UNZ2 370 aaKnown RBP34.27■■■■□ 3.08
PBRM1-218ENST00000458294 DUSP27Q5VZP5 1158 aa34.26■■■■□ 3.08
PBRM1-218ENST00000458294 DPF2Q92785 391 aa34.26■■■■□ 3.08
PBRM1-218ENST00000458294 MICALL2Q8IY33 904 aa34.25■■■■□ 3.07
PBRM1-218ENST00000458294 MBIPQ9NS73 344 aa34.24■■■■□ 3.07
PBRM1-218ENST00000458294 IRS4O14654 1257 aaPredicted RBP34.23■■■■□ 3.07
PBRM1-218ENST00000458294 AOC2O75106 756 aa34.23■■■■□ 3.07
PBRM1-218ENST00000458294 ABHD8Q96I13 439 aa34.23■■■■□ 3.07
PBRM1-218ENST00000458294 SHTN1A0MZ66 631 aa34.22■■■■□ 3.07
PBRM1-218ENST00000458294 C6orf229H3BNL8 230 aa34.22■■■■□ 3.07
PBRM1-218ENST00000458294 EYA3Q99504 573 aa34.22■■■■□ 3.07
PBRM1-218ENST00000458294 ZNF408Q9H9D4 720 aa34.22■■■■□ 3.07
PBRM1-218ENST00000458294 DBNDD1Q9H9R9 158 aa34.22■■■■□ 3.07
PBRM1-218ENST00000458294 ZBTB12Q9Y330 459 aaPredicted RBP34.22■■■■□ 3.07
PBRM1-218ENST00000458294 COL4A1P02462 1669 aa34.22■■■■□ 3.07
PBRM1-218ENST00000458294 PSMD14O00487 310 aa34.21■■■■□ 3.07
PBRM1-218ENST00000458294 GPSM2P81274 684 aa34.21■■■■□ 3.07
PBRM1-218ENST00000458294 RTL5Q5HYW3 569 aaPredicted RBP34.21■■■■□ 3.07
PBRM1-218ENST00000458294 POLLQ9UGP5 575 aa34.21■■■■□ 3.07
PBRM1-218ENST00000458294 CA12O43570 354 aa34.2■■■■□ 3.07
PBRM1-218ENST00000458294 RIMBP2O15034 1052 aa34.19■■■■□ 3.06
PBRM1-218ENST00000458294 ZNF853P0CG23 659 aa34.19■■■■□ 3.06
PBRM1-218ENST00000458294 RPS12P25398 132 aaKnown RBP34.19■■■■□ 3.06
PBRM1-218ENST00000458294 GOLGA2Q08379 1002 aa34.19■■■■□ 3.06
PBRM1-218ENST00000458294 RIC3Q7Z5B4 369 aa34.19■■■■□ 3.06
PBRM1-218ENST00000458294 HSP90B1P14625 803 aaKnown RBP34.18■■■■□ 3.06
PBRM1-218ENST00000458294 BRPF1P55201 1214 aaPredicted RBP34.18■■■■□ 3.06
PBRM1-218ENST00000458294 RPS8P62241 208 aaKnown RBP34.18■■■■□ 3.06
PBRM1-218ENST00000458294 ZBTB38Q8NAP3 1195 aaPredicted RBP34.18■■■■□ 3.06
PBRM1-218ENST00000458294 ECE2O60344 883 aa34.17■■■■□ 3.06
PBRM1-218ENST00000458294 TBC1D16Q8TBP0 767 aa34.17■■■■□ 3.06
PBRM1-218ENST00000458294 SAMD7Q7Z3H4 446 aa34.16■■■■□ 3.06
PBRM1-218ENST00000458294 USP48Q86UV5 1035 aa34.16■■■■□ 3.06
PBRM1-218ENST00000458294 IFT57Q9NWB7 429 aa34.16■■■■□ 3.06
PBRM1-218ENST00000458294 CALD1Q05682 793 aaKnown RBP34.15■■■■□ 3.06
PBRM1-218ENST00000458294 PODXL2Q9NZ53 605 aa34.15■■■■□ 3.06
PBRM1-218ENST00000458294 GNAI1P63096 354 aa34.14■■■■□ 3.06
PBRM1-218ENST00000458294 TBC1D10BQ4KMP7 808 aaPredicted RBP34.14■■■■□ 3.06
PBRM1-218ENST00000458294 RTL9Q8NET4 1388 aa34.13■■■■□ 3.05
PBRM1-218ENST00000458294 DOK7Q18PE1 504 aa34.13■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms