RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 RXRAP19793 462 aa22.51■■□□□ 1.19
SNX27-204ENST00000458013 DNAJC25Q9H1X3 360 aa22.5■■□□□ 1.19
SNX27-204ENST00000458013 TAOK3Q9H2K8 898 aa22.5■■□□□ 1.19
SNX27-204ENST00000458013 DBF4Q9UBU7 674 aaPredicted RBP22.5■■□□□ 1.19
SNX27-204ENST00000458013 FAM170AA1A519 330 aa22.5■■□□□ 1.19
SNX27-204ENST00000458013 KRT13P13646 458 aa22.5■■□□□ 1.19
SNX27-204ENST00000458013 TIAM1Q13009 1591 aa22.5■■□□□ 1.19
SNX27-204ENST00000458013 ZBTB21Q9ULJ3 1066 aa22.5■■□□□ 1.19
SNX27-204ENST00000458013 NAA15Q9BXJ9 866 aaKnown RBP22.5■■□□□ 1.19
SNX27-204ENST00000458013 FSD2A1L4K1 749 aa22.5■■□□□ 1.19
SNX27-204ENST00000458013 LRPPRCP42704 1394 aaKnown RBP22.5■■□□□ 1.19
SNX27-204ENST00000458013 SNAPC4Q5SXM2 1469 aa22.5■■□□□ 1.19
SNX27-204ENST00000458013 CALM1P0DP23 149 aa22.49■■□□□ 1.19
SNX27-204ENST00000458013 CALM2P0DP24 149 aa22.49■■□□□ 1.19
SNX27-204ENST00000458013 CALM3P0DP25 149 aa22.49■■□□□ 1.19
SNX27-204ENST00000458013 GSDMDP57764 484 aa22.49■■□□□ 1.19
SNX27-204ENST00000458013 ALG1Q9BT22 464 aa22.49■■□□□ 1.19
SNX27-204ENST00000458013 PDE4BQ07343 736 aa22.49■■□□□ 1.19
SNX27-204ENST00000458013 SLC39A6Q13433 755 aa22.49■■□□□ 1.19
SNX27-204ENST00000458013 DNAI2Q9GZS0 605 aa22.49■■□□□ 1.19
SNX27-204ENST00000458013 MXRA7P84157 204 aa22.49■■□□□ 1.19
SNX27-204ENST00000458013 KARSQ15046 597 aaKnown RBP22.49■■□□□ 1.19
SNX27-204ENST00000458013 IFIT1BQ5T764 474 aaKnown RBP22.49■■□□□ 1.19
SNX27-204ENST00000458013 CCDC102BQ68D86 513 aa22.49■■□□□ 1.19
SNX27-204ENST00000458013 DNAI1Q9UI46 699 aa22.49■■□□□ 1.19
SNX27-204ENST00000458013 SDSP20132 328 aa22.49■■□□□ 1.19
SNX27-204ENST00000458013 DNAJC21Q5F1R6 531 aaKnown RBP22.49■■□□□ 1.19
SNX27-204ENST00000458013 ZSCAN22P10073 491 aaPredicted RBP22.48■■□□□ 1.19
SNX27-204ENST00000458013 DHX58Q96C10 678 aa22.48■■□□□ 1.19
SNX27-204ENST00000458013 TBCAO75347 108 aaKnown RBP22.48■■□□□ 1.19
SNX27-204ENST00000458013 UBE2HP62256 183 aa22.48■■□□□ 1.19
SNX27-204ENST00000458013 MCM6Q14566 821 aa22.48■■□□□ 1.19
SNX27-204ENST00000458013 WTAPQ15007 396 aa22.48■■□□□ 1.19
SNX27-204ENST00000458013 OTUD6BQ8N6M0 293 aa22.48■■□□□ 1.19
SNX27-204ENST00000458013 PA2G4Q9UQ80 394 aaKnown RBP22.48■■□□□ 1.19
SNX27-204ENST00000458013 FAM135AQ9P2D6 1515 aa22.48■■□□□ 1.19
SNX27-204ENST00000458013 RSPH14Q9UHP6 348 aa22.48■■□□□ 1.19
SNX27-204ENST00000458013 AMOTL2Q9Y2J4 779 aa22.48■■□□□ 1.19
SNX27-204ENST00000458013 AMOTQ4VCS5 1084 aa22.48■■□□□ 1.19
SNX27-204ENST00000458013 CYP7A1P22680 504 aa22.48■■□□□ 1.19
SNX27-204ENST00000458013 CEP112Q8N8E3 955 aa22.48■■□□□ 1.19
SNX27-204ENST00000458013 SELENOSQ9BQE4 189 aa22.48■■□□□ 1.19
SNX27-204ENST00000458013 POLA1P09884 1462 aaPredicted RBP22.47■■□□□ 1.19
SNX27-204ENST00000458013 DNM1Q05193 864 aaKnown RBP22.47■■□□□ 1.19
SNX27-204ENST00000458013 TNNQ9UQP3 1299 aa22.47■■□□□ 1.19
SNX27-204ENST00000458013 KIF5BP33176 963 aa22.47■■□□□ 1.19
SNX27-204ENST00000458013 STX17P56962 302 aa22.47■■□□□ 1.19
SNX27-204ENST00000458013 MRPS9P82933 396 aaKnown RBP22.47■■□□□ 1.19
SNX27-204ENST00000458013 FAM114A1Q8IWE2 563 aa22.47■■□□□ 1.19
SNX27-204ENST00000458013 MEIS3Q99687 375 aa22.47■■□□□ 1.19
SNX27-204ENST00000458013 CETN1Q12798 172 aa22.47■■□□□ 1.19
SNX27-204ENST00000458013 NGLY1Q96IV0 654 aa22.47■■□□□ 1.19
SNX27-204ENST00000458013 TTF1Q15361 905 aaPredicted RBP22.46■■□□□ 1.19
SNX27-204ENST00000458013 IGSF3O75054 1194 aa22.46■■□□□ 1.19
SNX27-204ENST00000458013 PTPRCP08575 1304 aa22.46■■□□□ 1.19
SNX27-204ENST00000458013 KIAA0753Q2KHM9 967 aa22.46■■□□□ 1.19
SNX27-204ENST00000458013 PHF8Q9UPP1 1060 aa22.46■■□□□ 1.19
SNX27-204ENST00000458013 CCDC186Q7Z3E2 898 aa22.45■■□□□ 1.18
SNX27-204ENST00000458013 IKBKGQ9Y6K9 419 aa22.45■■□□□ 1.18
SNX27-204ENST00000458013 DISP3Q9P2K9 1392 aa22.45■■□□□ 1.18
SNX27-204ENST00000458013 AKR1B10O60218 316 aa22.45■■□□□ 1.18
SNX27-204ENST00000458013 LRSAM1Q6UWE0 723 aa22.45■■□□□ 1.18
SNX27-204ENST00000458013 GSTA5Q7RTV2 222 aa22.45■■□□□ 1.18
SNX27-204ENST00000458013 CALCOCO1Q9P1Z2 691 aa22.45■■□□□ 1.18
SNX27-204ENST00000458013 RFC4P35249 363 aa22.45■■□□□ 1.18
SNX27-204ENST00000458013 GIGYF2Q6Y7W6 1299 aaKnown RBP22.45■■□□□ 1.18
SNX27-204ENST00000458013 CABP5Q9NP86 173 aa22.45■■□□□ 1.18
SNX27-204ENST00000458013 EXOC5O00471 708 aa22.45■■□□□ 1.18
SNX27-204ENST00000458013 CCDC174Q6PII3 467 aa22.44■■□□□ 1.18
SNX27-204ENST00000458013 RPGRIP1LQ68CZ1 1315 aa22.44■■□□□ 1.18
SNX27-204ENST00000458013 KRT28Q7Z3Y7 464 aa22.44■■□□□ 1.18
SNX27-204ENST00000458013 CCDC63Q8NA47 563 aa22.44■■□□□ 1.18
SNX27-204ENST00000458013 TBC1D5Q92609 795 aa22.44■■□□□ 1.18
SNX27-204ENST00000458013 ANKRD24Q8TF21 1146 aa22.44■■□□□ 1.18
SNX27-204ENST00000458013 TSNARE1Q96NA8 513 aa22.44■■□□□ 1.18
SNX27-204ENST00000458013 CCDC50Q8IVM0 306 aa22.44■■□□□ 1.18
SNX27-204ENST00000458013 EEF2P13639 858 aaKnown RBP22.44■■□□□ 1.18
SNX27-204ENST00000458013 SLF2Q8IX21 1173 aa22.44■■□□□ 1.18
SNX27-204ENST00000458013 DTNBO60941 627 aa22.43■■□□□ 1.18
SNX27-204ENST00000458013 PHACTR2O75167 634 aa22.43■■□□□ 1.18
SNX27-204ENST00000458013 GPIHBP1Q8IV16 184 aa22.43■■□□□ 1.18
SNX27-204ENST00000458013 MIGA1Q8NAN2 632 aa22.43■■□□□ 1.18
SNX27-204ENST00000458013 SKILP12757 684 aa22.43■■□□□ 1.18
SNX27-204ENST00000458013 VTI1AQ96AJ9 217 aa22.43■■□□□ 1.18
SNX27-204ENST00000458013 RBM8AQ9Y5S9 174 aaKnown RBP22.43■■□□□ 1.18
SNX27-204ENST00000458013 MCM5P33992 734 aa22.43■■□□□ 1.18
SNX27-204ENST00000458013 FERP16591 822 aa22.43■■□□□ 1.18
SNX27-204ENST00000458013 POTEB2H3BUK9 544 aa22.42■■□□□ 1.18
SNX27-204ENST00000458013 SP4Q02446 784 aa22.42■■□□□ 1.18
SNX27-204ENST00000458013 TTC12Q9H892 705 aaPredicted RBP22.42■■□□□ 1.18
SNX27-204ENST00000458013 WASLO00401 505 aaPredicted RBP22.42■■□□□ 1.18
SNX27-204ENST00000458013 HLA-DOAP06340 250 aa22.42■■□□□ 1.18
SNX27-204ENST00000458013 NMIQ13287 307 aaPredicted RBP22.42■■□□□ 1.18
SNX27-204ENST00000458013 ZKSCAN3Q9BRR0 538 aa22.42■■□□□ 1.18
SNX27-204ENST00000458013 TROQ12816 1431 aaPredicted RBP22.42■■□□□ 1.18
SNX27-204ENST00000458013 ZBTB43O43298 467 aa22.42■■□□□ 1.18
SNX27-204ENST00000458013 CRNKL1Q9BZJ0 848 aaKnown RBP22.42■■□□□ 1.18
SNX27-204ENST00000458013 EPRSP07814 1512 aaKnown RBP22.41■■□□□ 1.18
SNX27-204ENST00000458013 PLEKHH2Q8IVE3 1493 aa22.41■■□□□ 1.18
SNX27-204ENST00000458013 MCM7P33993 719 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms