RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 MEIS3Q99687 375 aa14.82□□□□□ -0.04
TRAPPC12-212ENST00000457845 GNAI3P08754 354 aa14.81□□□□□ -0.04
TRAPPC12-212ENST00000457845 NPR1P16066 1061 aa14.81□□□□□ -0.04
TRAPPC12-212ENST00000457845 MVPQ14764 893 aaKnown RBP14.81□□□□□ -0.04
TRAPPC12-212ENST00000457845 RABL6Q3YEC7 729 aaPredicted RBP14.81□□□□□ -0.04
TRAPPC12-212ENST00000457845 EPHA10Q5JZY3 1008 aa14.81□□□□□ -0.04
TRAPPC12-212ENST00000457845 SUCLG2Q96I99 432 aa14.81□□□□□ -0.04
TRAPPC12-212ENST00000457845 CRAMP1Q96RY5 1269 aa14.81□□□□□ -0.04
TRAPPC12-212ENST00000457845 RTL9Q8NET4 1388 aa14.81□□□□□ -0.04
TRAPPC12-212ENST00000457845 SPEF2Q9C093 1822 aa14.8□□□□□ -0.04
TRAPPC12-212ENST00000457845 CTSWP56202 376 aa14.8□□□□□ -0.04
TRAPPC12-212ENST00000457845 ITPRIPQ8IWB1 547 aa14.8□□□□□ -0.04
TRAPPC12-212ENST00000457845 PIM2Q9P1W9 311 aa14.8□□□□□ -0.04
TRAPPC12-212ENST00000457845 DDX19BQ9UMR2 479 aa14.8□□□□□ -0.04
TRAPPC12-212ENST00000457845 HDAC5Q9UQL6 1122 aa14.8□□□□□ -0.04
TRAPPC12-212ENST00000457845 COG6Q9Y2V7 657 aa14.8□□□□□ -0.04
TRAPPC12-212ENST00000457845 SUPT16HQ9Y5B9 1047 aaKnown RBP14.8□□□□□ -0.04
TRAPPC12-212ENST00000457845 COL4A1P02462 1669 aa14.8□□□□□ -0.04
TRAPPC12-212ENST00000457845 UBTFL1P0CB47 393 aaPredicted RBP14.79□□□□□ -0.04
TRAPPC12-212ENST00000457845 ALDH1B1P30837 517 aa14.79□□□□□ -0.04
TRAPPC12-212ENST00000457845 CCDC152Q4G0S7 254 aa14.79□□□□□ -0.04
TRAPPC12-212ENST00000457845 CNKSR1Q969H4 720 aa14.79□□□□□ -0.04
TRAPPC12-212ENST00000457845 FER1L6Q2WGJ9 1857 aa14.78□□□□□ -0.04
TRAPPC12-212ENST00000457845 LRRC37AA6NMS7 1700 aa14.78□□□□□ -0.04
TRAPPC12-212ENST00000457845 ANKRD44Q8N8A2 993 aa14.78□□□□□ -0.04
TRAPPC12-212ENST00000457845 RPGRQ92834 1020 aaKnown RBP14.78□□□□□ -0.04
TRAPPC12-212ENST00000457845 RBM17Q96I25 401 aaKnown RBP14.78□□□□□ -0.04
TRAPPC12-212ENST00000457845 LMBR1LQ6UX01 489 aa14.77□□□□□ -0.05
TRAPPC12-212ENST00000457845 DDX46Q7L014 1031 aaKnown RBP14.77□□□□□ -0.05
TRAPPC12-212ENST00000457845 TTLL6Q8N841 843 aa14.77□□□□□ -0.05
TRAPPC12-212ENST00000457845 ZNF622Q969S3 477 aaKnown RBP eCLIP14.77□□□□□ -0.05
TRAPPC12-212ENST00000457845 BICC1Q9H694 974 aaKnown RBP14.77□□□□□ -0.05
TRAPPC12-212ENST00000457845 GREM2Q9H772 168 aa14.77□□□□□ -0.05
TRAPPC12-212ENST00000457845 LRRFIP2Q9Y608 721 aaKnown RBP14.77□□□□□ -0.05
TRAPPC12-212ENST00000457845 A0A1B0GUL6 1792 aa14.77□□□□□ -0.05
TRAPPC12-212ENST00000457845 GNAI2P04899 355 aa14.76□□□□□ -0.05
TRAPPC12-212ENST00000457845 MTX1Q13505 466 aa14.76□□□□□ -0.05
TRAPPC12-212ENST00000457845 CHMP4BQ9H444 224 aaKnown RBP14.76□□□□□ -0.05
TRAPPC12-212ENST00000457845 SEC31BQ9NQW1 1179 aa14.76□□□□□ -0.05
TRAPPC12-212ENST00000457845 ZBTB40Q9NUA8 1239 aa14.76□□□□□ -0.05
TRAPPC12-212ENST00000457845 CCDC88AQ3V6T2 1871 aa14.76□□□□□ -0.05
TRAPPC12-212ENST00000457845 BBOX1O75936 387 aa14.75□□□□□ -0.05
TRAPPC12-212ENST00000457845 CENPBP07199 599 aaPredicted RBP14.75□□□□□ -0.05
TRAPPC12-212ENST00000457845 GRAPQ13588 217 aa14.75□□□□□ -0.05
TRAPPC12-212ENST00000457845 DALRD3Q5D0E6 543 aaKnown RBP14.75□□□□□ -0.05
TRAPPC12-212ENST00000457845 GRAPLQ8TC17 118 aaPredicted RBP14.75□□□□□ -0.05
TRAPPC12-212ENST00000457845 C7orf43Q8WVR3 580 aa14.75□□□□□ -0.05
TRAPPC12-212ENST00000457845 CELF1Q92879 486 aaKnown RBP14.75□□□□□ -0.05
TRAPPC12-212ENST00000457845 SBF1O95248 1867 aa14.75□□□□□ -0.05
TRAPPC12-212ENST00000457845 ITGA6P23229 1130 aa14.74□□□□□ -0.05
TRAPPC12-212ENST00000457845 RPS8P62241 208 aaKnown RBP14.74□□□□□ -0.05
TRAPPC12-212ENST00000457845 FAM161AQ3B820 660 aa14.74□□□□□ -0.05
TRAPPC12-212ENST00000457845 PRPF40BQ6NWY9 871 aaKnown RBP14.74□□□□□ -0.05
TRAPPC12-212ENST00000457845 CCDC85AQ96PX6 553 aaPredicted RBP14.74□□□□□ -0.05
TRAPPC12-212ENST00000457845 LTBP1Q14766 1721 aa14.74□□□□□ -0.05
TRAPPC12-212ENST00000457845 SNED1Q8TER0 1413 aa14.74□□□□□ -0.05
TRAPPC12-212ENST00000457845 RFX5P48382 616 aaPredicted RBP14.73□□□□□ -0.05
TRAPPC12-212ENST00000457845 TMC4Q7Z404 712 aa14.73□□□□□ -0.05
TRAPPC12-212ENST00000457845 CDC5LQ99459 802 aaKnown RBP14.73□□□□□ -0.05
TRAPPC12-212ENST00000457845 ANKRD18BA2A2Z9 1011 aa14.72□□□□□ -0.05
TRAPPC12-212ENST00000457845 IFIT5Q13325 482 aaKnown RBP14.72□□□□□ -0.05
TRAPPC12-212ENST00000457845 SP8Q8IXZ3 490 aa14.72□□□□□ -0.05
TRAPPC12-212ENST00000457845 CRBNQ96SW2 442 aa14.72□□□□□ -0.05
TRAPPC12-212ENST00000457845 BCS1LQ9Y276 419 aa14.72□□□□□ -0.05
TRAPPC12-212ENST00000457845 ATP6V0A2Q9Y487 856 aa14.72□□□□□ -0.05
TRAPPC12-212ENST00000457845 DICER1Q9UPY3 1922 aaKnown RBP14.72□□□□□ -0.05
TRAPPC12-212ENST00000457845 CHD4Q14839 1912 aa14.71□□□□□ -0.05
TRAPPC12-212ENST00000457845 PPEF1O14829 653 aaPredicted RBP14.71□□□□□ -0.05
TRAPPC12-212ENST00000457845 YBX3P16989 372 aaKnown RBP eCLIP14.71□□□□□ -0.05
TRAPPC12-212ENST00000457845 ATP8B2P98198 1209 aa14.71□□□□□ -0.05
TRAPPC12-212ENST00000457845 CCDC57Q2TAC2 916 aa14.71□□□□□ -0.05
TRAPPC12-212ENST00000457845 CC2D2BQ6DHV5 1058 aa14.71□□□□□ -0.05
TRAPPC12-212ENST00000457845 ANKRD18AQ8IVF6 992 aa14.71□□□□□ -0.05
TRAPPC12-212ENST00000457845 BSDC1Q9NW68 430 aaPredicted RBP14.71□□□□□ -0.05
TRAPPC12-212ENST00000457845 AAMPQ13685 434 aa14.7□□□□□ -0.06
TRAPPC12-212ENST00000457845 POLA2Q14181 598 aa14.7□□□□□ -0.06
TRAPPC12-212ENST00000457845 RPAP2Q8IXW5 612 aaPredicted RBP14.7□□□□□ -0.06
TRAPPC12-212ENST00000457845 SSH3Q8TE77 659 aa14.7□□□□□ -0.06
TRAPPC12-212ENST00000457845 C1orf115Q9H7X2 142 aa14.7□□□□□ -0.06
TRAPPC12-212ENST00000457845 CHMP3Q9Y3E7 222 aa14.7□□□□□ -0.06
TRAPPC12-212ENST00000457845 PNMA6EA0A0J9YXQ4 647 aa14.69□□□□□ -0.06
TRAPPC12-212ENST00000457845 C21orf2O43822 256 aa14.69□□□□□ -0.06
TRAPPC12-212ENST00000457845 IGHMBP2P38935 993 aaKnown RBP14.69□□□□□ -0.06
TRAPPC12-212ENST00000457845 PTPN12Q05209 780 aaKnown RBP14.69□□□□□ -0.06
TRAPPC12-212ENST00000457845 GRIPAP1Q4V328 841 aa14.69□□□□□ -0.06
TRAPPC12-212ENST00000457845 SOGA3Q5TF21 947 aa14.69□□□□□ -0.06
TRAPPC12-212ENST00000457845 CEP85Q6P2H3 762 aa14.69□□□□□ -0.06
TRAPPC12-212ENST00000457845 ZNF594Q96JF6 807 aaPredicted RBP14.69□□□□□ -0.06
TRAPPC12-212ENST00000457845 COPRSQ9NQ92 184 aa14.69□□□□□ -0.06
TRAPPC12-212ENST00000457845 WWC3Q9ULE0 1092 aa14.69□□□□□ -0.06
TRAPPC12-212ENST00000457845 SRGAP3O43295 1099 aa14.68□□□□□ -0.06
TRAPPC12-212ENST00000457845 FBXO3Q9UK99 471 aa14.68□□□□□ -0.06
TRAPPC12-212ENST00000457845 GOLGB1Q14789 3259 aaKnown RBP14.68□□□□□ -0.06
TRAPPC12-212ENST00000457845 DUOX1Q9NRD9 1551 aa14.68□□□□□ -0.06
TRAPPC12-212ENST00000457845 GRIN3BO60391 1043 aa14.67□□□□□ -0.06
TRAPPC12-212ENST00000457845 GPR162Q16538 588 aa14.67□□□□□ -0.06
TRAPPC12-212ENST00000457845 CCDC93Q567U6 631 aa14.67□□□□□ -0.06
TRAPPC12-212ENST00000457845 OLFM4Q6UX06 510 aa14.67□□□□□ -0.06
TRAPPC12-212ENST00000457845 LDHAL6AQ6ZMR3 332 aa14.67□□□□□ -0.06
TRAPPC12-212ENST00000457845 SLC51AQ86UW1 340 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms